Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                 <-----------------AGL1                                                                    <---------ARR11(3)                                                          ----------->GT1      <---------RAP2.6(2)                                                     <---------DEAR3(1)      <-----------RAV1(1) -------ANAC58                                       ------>ZmHOX2a(2)   <---------AHL20(2)    <----- -------ANAC58                                     <---------ARR14(2) --------->TOE2(3)        <----- -GT1          <---------ZAT18                     --------->ARR14(2) --------->YAB1<---------RAP2.6(3)   gcttgaagagcaatttgttcacttgagttagaagttgaaaatgaattgttttggatcggtgagttaaaactatcttaaattgtggccgatttggcaatat  27494400                            <---------ARR11(3)                            --------->ARR11(3)                           <---------GLK1(1)                           --------->GLK1(1)                    <---------GLK1(2)                  <---------YAB1               --------->GLK1(2)            ----------->ARR10        <----------ID1     <-----------GT1        ----------->GT1 <---------YAB1       --------->YAB1 --------->ANAC46--------->ANAC55(2) ----AHL20(1) <---------GLK1(2) ------>ZmHOX2a(1)    <---------ZAT6         --------->YAB1  <-------- ----ARR11(3) --------->ARR11(3)<----------DOF2<---------YAB1               <---------ANAC55(2)   atgttgtaagtagtaagattctgattctgatatccttttaagacaaattatactagtattacaagactcaatcttcttacataatacaaaattcagttca  27494500                                                               <-----------GT1                                                        <---------HSFB2a(2)                                                        --------->HSFB2a(2)                                                  <---------ARR11(3)                                                  <---------AHL20(1)                                 --------->AHL20(2)  <----------DOF2                                 --------->YAB1   --------->AHL20(1)       >>>>>>>>>CBP60g  ----------->GT1           --------->ARR11(3)  --------->CCA1(2)       >>>>>>>>>SARD1<------ZmHOX2a(1)           --------->CCA1(1)   --------->ARR11(3) -At4g35610 ----------->GT1   --------->YAB1     --------->RVE1(1)   <---------ARR11(3)        <-----   tggttcgaaatttggagtaaaaaggattgaaataataaaaaaaacattcaaatatcttttggaaataacaagatatatgactctgttttcatgtatagat  27494600                        <---------MYB46(3)                        ----------->GT1                       <---------ANAC46                     <---------MYB46(3)            --------->ZAT14                    --------->ALFIN1        <---------bZIP60(1)                    <---------AtMYB61       --------->bZIP60(1)             --------->DAG2                 <---------AtMYB61     ----------->GT1               ---------->DOF2           <----------DOF2            --------->DAG2             ---------->DOF2 ----GLK1(2)  --------->ATHB12       ---------->DOF2    --------->ANAC46  ---------->DOF2   <--------   tgttgtgcatcatctttcattggtggtggataaaaaaaaaaaagtgacaacagtttacacgaagaccgaaagaaaggaaaggtagcaataggttgtgtaa  27494700                                                         --------->ANAC58                                                         --------->ANAC58                                                      ----------->TGA1                                                      ----------->HVH21                                                <---------DEAR3(1)                                                <---------ANAC46                                               <---------LBD16                                               <------NtERF2                                               --------->ATERF1(1)                                              <---------RRTF1(1)                                              <---------ERF1                                              ------>NtERF2                                              <---------RAP2.3(1)                                             <---------RAP2.3(2)                                             <---------RAP2.6(2)                                             <---------RRTF1(3)                                             <---------ATERF1(2)                                             <---------DEAR3(1)                        --------->ANAC46     <---------RAP2.3(3)                        --------->ANAC58     <---------RRTF1(2)                   --------->ARR14(2)                        --------->ANAC58     --------->ATERF1(2)                  <---------GLK1(2)                <---------ICU4            ----------->HVH21                ------->GAMYB               <---------YAB1    --------->GLK1(2)<------NtERF2     ------->TEIL  <---------ARR14(2)-             <---------ICU4      --------->ARR14(2) <---------At4g35610   --------->MYB46(3)        -       <---------At4g35610       <---------ARR14(2) --------->At4g35610 --------->MYB52(1)        --- -ANAC46     --------->YAB1     <---------GLK1(2)--------->LBD16   <---------CCA1(2)           ------   gaaaatttcatctcatcatcattttcaagacacagaatatggttttgacggcggagatgacgcaaacgtgaatctaacggaccgtattctctctgtaaca  27494800                                                                          --------->ANAC46                                                                          --------->ANAC55(2)                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                          --------->ANAC55(1)                                                                     --------->ZAT14                                     <---------ARR14(2)              <---------ZAT14          <---------ANAC58           --------->ARR14(2)       <---------ANAC58     <----------DOF2             <<<<<<<<<<WRKY63             <---------ANAC58 ----->MYB46(1)    --------->At4g35610                        <---------DEAR3(1)          <----------DOF2 ----->MYB83       ----------->RAV1(2)                  ---------->DOF2   <---------O2<---------ANAC58 ------>AtMYB61    <---------At4g35610       *TSS    <---------TOE2(3) <---------REM1(2)  =========== --->ZAT6 <---------ANAC58     ----------->GT1   <----------DOF2<------NtERF2         <---------ANAC58   ccaacgtcttttgcttatttcatctgtagcaaatagtcaaatctgaaaatgctttaatgaaagggcgtctctgtacacgtagccacttgcttctttcact  27494900             <------ZmHOX2a(1)        <-----------TGA1        <-----------HVH21       --------->TGA1a                  <---------LBD16       --------->O2            --------->YAB1       <---------TGA1a  <---------At4g35610       ================================bZIP_DOF                                           --------->YAB1   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  ------>ZmHOX2a(1)               <---------ZAT18  <-----------GT1 ================bZIP_DOF   <----------DOF2<---------MYB52(1)     <---------LBD16      <-----------GT1   ctctctctctcgtcaggaatcgtctctgctctttcatcatcctccggtctctctctccctctctctaattcggagcgctaatttctgttttatcatcttc  27495000                                               ====================================HOX2a_HOX2a      <                                               ------>ZmHOX2a(2)                                   --                                              <------ZmHOX2a(2)                                   <--                                              =====================================HOX2a_HOX2a   <---                                             <---------ARR11(3)                                  <---                                             <---------ARR14(2)             =========================                                     --------->DAG2         ----------->GT1 --------->LBD16      <---                                 --------->AHL20(2)       --------->DAG2    ------>ZmHOX2a(1)    ----                        <------MYB46(1)      --------->ARR11(3)   <----------DOF2                ----                        <------MYB83---------->DOF2      ---------->DOF2    =========================                       --------->MYB59       --------->ARR14(2)   <---------DAG2                 ----                <---------AtLEC2--------->AHL20(2)  --------->AtLEC2    <-----------GT1      --------   ttgagggttcttctagttgcatagctaggtctaaataaaaaagtagggatcttgatgcaaaaaggaaacttttttttcctggtttccctaggcatgaaag  27495100    <------MYB46(1)    <------MYB83   <---------AtMYB61  <---------MYB52(1) -----------RAV1(1) ---->ZmHOX2a(2) ----ZmHOX2a(2) ------ARR14(2) ------ARR11(3)                                                          --------->ANAC58 =====HOX2a_HOX2a                                                    <---------------------WRI1 ------AGP1                                                   --------------->AGL15         <-------- ----->ARR11(3)                                               <---------------AGL15       --------->DAG2 ----->ARR14(2)                  <----------DOF2             ----------------->AGL1   --------->ANAC58 ====HOX2a_HOX2a        <----------DOF2             --------->ARR11(3)   --------->ANAC58---------->DOF2 ----->AGP1         <---------ZAT18               <---------YAB1   <---------LBD16    --------->ANAC58 -->DOF2         <-----------RAV1(1)           <-------TEIL<-----------GT1           <---------------   atctgttggtgtttagaatttgtgggcttcaattactttgacttctaggttgatgattttgttacattttgggggaagtaatctatgaacgaaaagcaca  27495200                                      <---------TOE2(3)                        <----------DOF2             --------->DAG2                        <---------DAG2--------->MYB59             ------>ZmHOX2a(1)        <---------TOE1(3)     <---------CCA1(2) --ID1      <---------ANAC58      ------->TEIL     ---------->DOF2 ------WRI1 <---------ANAC58    <-------TEIL  --------->AtLEC2             --------->GLK1(1)   aactgctatgtattccttacgaagcgcttttagatgcatttaggttttatgcaaaaagtcccataacttgttgtctgatatcaaagttttcattttggga  27495300  Previous    Next  AGI:  At1g73090.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO23197.1) Range:  from: 27491878    to: 27494427    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g73100.1    Description:  SUVH3 (SU(VAR)3-9 HOMOLOG 3). Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 (SUVH3) [Arabidopsis Thaliana] (GB:Q9C5P4;GB:Q9SSL7); similar to SUVH1 (SU(VAR)3-9 HOMOLOG 1) [Arabidopsis thaliana] (TAIR:AT5G04940.1); similar to SUVH1 (SU(VAR)3-9 HOMOLOG 1) [Arabidopsis thaliana] (TAIR:AT5G04940.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46198.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Pre-SET zinc-binding Range:  from: 27494845    to: 27497843    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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