Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <------ZmHOX2a(2)                                                                     >>>>>>>>>>>>>>>>>LFY                                                                  --------->CCA1(2)                                                                 <---------ARR11(3)              --------->YAB1                                     --------->ARR11(3)          <---------YAB1                                         --------->ARR11(1)     ----------->GT1                              <---------ICU4 --------->ARR14(2)       <---------At4g35610   ---------->DOF2                      --------->AHL20(2)       <---------ARR14(2)------>ZmHOX2a(2) ------>TOE2(3)                       --------->ANAC58         ----------->ARR10 <---------ARR11(3) ------>YAB1  <---------ICU4          --------->ANAC58   --------->LBD16         --------->ARR11(3) ----->MYB46(3)                 --------->DOF5.7(2)    <-----------------------TaNAC69(2) <-------GAMYB   ccatagaaagttacaattatcccataaacaaaacgttaccaagaaaataacataagtaccgcaagaagatttgccactgttacgatcttgacagttgatt  26768500                                                                                <---------MYB46(3)                                                                              --------->ATERF1(1)                                                                              <------NtERF2                                                                              <-------GAMYB                                                                             <---------MYB46(3)                                                                             <---------DEAR3(2)                                                                            --------->ALFIN1                                                                            <---------DREB2C(2)                                                                            <---------DEAR3(1)                                                                          --------->LBD16                                                                         <---------DEAR3(1)                                                                         <---------RAP2.6(2)                                                                        --------->SPL7                                                                        --------->ATERF1(1)                                                                       --------->ALFIN1                                                                      <-----------HVH21                              <------ZmHOX2a(1)                       --------->ARR14(2)            -                       ----------->HVH21                              <---------ARR14(2)            <                    <-----------HVH21                                 <---------SPL7                -                  ===================HOX2a_HOX2a                 <---------ARR14(2)      <---------MYB52(1)                  ------>ZmHOX2a(2)                            --------->ANAC58<---------AtMYB61   <-                <---------ARR14(2)                             --------->ANAC58--------->ALFIN1 -----                --------->ARR14(2)                        --------->DAG2<---------LBD16 <-------GAMYB             <---------WOX13(1)                           <---------TOE2(3)<---------ABI4(1)<--------          <---------YAB1<---------At4g35610        ----------->GT1--------->CCA1(2)    ----------->GT1     <---------At4g35610--------->At4g35610       ----------->GT1--------->ARR14(2) <------ZmHOX2a(1)   tcatggaagatgatgactgatccgtctgatgaggaggttttctgtagtagaacgggaaataaggcaagatagggtccggcggtggaggaccgttatatcc  26768600                                                                                    <---------TOE2(3)                                                                                <-------GAMYB                                                                               <------MYB46(1)                                                                               <------MYB83                                                                               <---------DEAR3(2)                                                                              <---------DEAR3(1)    <                                                                              <---------MYB46(3)   <-                                                                             <--------P     <--------                                                                             <---------MYB55(1) <----                        --------->ALFIN1                                    <-----------HVH21-------- ---------->RAV1(2)  <---------TOE2(3)     <-------TEIL                     <---------MYB52(1) ------ ---------ZAT2       --------->DAG2    --------->MYB59                 <-----------GT1<------ZmHOX2a(1) -------->ZAT2--------->ANAC55(2)      --------------->AtSPL8          <---------ARR14(2)--------->YAB1 --------ALFIN1--------->LBD16         --------------->AtSPL3     <---------ARR14(2)<---------ANAC46< ---->ANAC46  --------->ANAC46  ----------->GT1                  <------ZmHOX2a(1)  <---------TOE1(3) -CCA1(2)  --------->TOE2(2)   ----------->GT1                <------ZmHOX2a(1)<---------MYB46(3) ---   cccgctgggattacctccgtaataaggtggagaagggtaattcggtacattactcgacgatggaggaggatagtaaccggtcggttgaggataataaccg  26768700     <---------ANAC46     <---------ANAC58     <---------ANAC58                                   <---------RAP2.6(2)    --------->ATHB12                                    <---------ANAC58 <-------GAMYB                                          <---------ANAC58 ---------DEAR3(2)                             --------->ANAC58 --------DEAR3(1)                              --------->ANAC58 ---GT1--------->ALFIN1                       --------->SPL7 -----SPL7--------->TCP20                     <-------TEIL ->MYB52(1)                                 <---------SPL7<------NtERF2 ->GAMYB  --------->TCP16(1)      ----------->GT1       <---------ANAC46      <---------------AtSPL8 ---------MYB46(3)  --------->LBD16       <---------------AtSPL8         <---------YAB1             - ------>SPL7     --------->MYB52(1)       <---------------AtSPL3--------->ARR11(3)                  -   gccggttgagtggagccagtaccggctattggcaacgggttacaagggtacggacatggcgtctgtgatattgttatgaaggggaacataacaagagaaa  26768800                              --------->TOE2(3)                             <---------ANAC46                                    --------->AHL20(2)                             ----------->GT1               <---------ARR11(3)  ----------->GT1                          <---------MYB52(1)               --------->ARR11(3)  --------->ANAC58                    ----------->HVH21                      <---------GLK1(2)   --------->ANAC58                    --------->WRKY38(1)        <---------AHL20(2)      ----------->GT1 -------->ANAC58  --------->At4g35610          --------->AHL20(2)      --------->YAB1 -------->ANAC58  <---------bZIP60(2)<---------ICU4  <---------YAB1<---------AHL20(2)--------->AHL20(2)   acacgaacaatagacttatgaggtgaccgtaacgtttattcatggccaattttttatgaaagattttgtttaatggtaaacaagaaaatatatgtttgtg  26768900                         <----------DOF2              <---------ARR11(3)              --------->ARR14(2)              <---------ARR14(2)              --------->ARR11(3)              --------->ARR14(3)                                         --------->AHL20(2)              <---------GLK1(2)                                      <----------DOF2              <---------ARR14(3)                                    <---------ANAC58            ----------->ARR10<----------DOF2       <---------GLK1(1)<---------ANAC58   ---------->DOF2  --------->HSFB2a(2)        *TSS--------->GLK1(1)<---------ANAC46              <--   taagagaaagagagaagattttcgagactttctttcttcttgagtctgagtggaaatcagtaagtgagtggcttttaaaataagttgtttcatgtgagtt  26769000                    --------->AHL20(1)                    <---------ARR11(3)                           <---------ANAC58                    <---------AHL20(1)                           <---------ANAC58                    --------->AHL20(2)                           <---------ANAC46                  --                    <---------AHL20(2)                       ------->MYC2                          <-                    --------->ARR11(3)                       ------->MYC3                         ---                  ------->TEIL       <---------MYB52(2)      <-------MYC2                   ---------               --------->ICU4  ----------->TGA1            ------->TEIL                   <---------ANAC58               <---------YAB1<---------ICU4         <---------TOE2(3)                     <---------ANAC46   --------->MYB52(1)        --------->YAB1         <---------YAB1                        <---------ANAC58 --------ID1<---------ZAT6  --------->ICU4    --------->ZAT18<-------MYC3             ---------->ID1   aagacaaacgactagtgatgaatatattgaataatgacgactaacaagggcattgagattgaacgtgtcttgtggctacgatacacttgttgtcttgtaa  26769100                                               ------>NtERF2                                    --------------->AGL15                                    <---------MYB59                                    <---------------AGL15                                   ----------------->AG                                   ----------------->AGL1                      <------MYB83      <---------ANAC58             ----------------->AGL2                      <------MYB46(1)      <---------ANAC58             <-----------------AGL1                <---------TOE2(3)    <---------YAB1               <-----------GT1<------NtERF2 --------->AHL20(2)  --------->YAB1              <----------DOF2 --------->DEAR3(1)  <---------AHL20(2)     <------ZmHOX2a(2) <---------YAB1            ------>ZmHOX2a(1)  <---------ALFIN1<---------AHL20(2)        <---------ARR11(3) ------->YAB1           ---------->ID1       --------->ATERF1(1)  --------->AHL20(2) --------->LBD16 --------ICU4         <---------ANAC58------>MYB46(1)     <---------YAB1 <---------TOE1(3) ------>ICU4          <---------ANAC58------>MYB83        --------->AHL20(2)  <---------AtMYB61 ----- -->GT1         <---------AHL20(2)<-----------------AGL1  <---------AHL20(2)  --------->MYB59  ------   attatgatacttggctgtataatttcgtccttctttaaccaaattgggccaccgcttgatataattaaaaaaattcaggtttggttccgagatcagaatt  26769200                                                         <---------YAB1                                                      --------->ICU4                                                    --------->YAB1                                                    <---------ICU4                 <---------YAB1        <----------DOF2<---------YAB1           <---------HSFB2a(2)            <---------ARR11(3)         <---------------AGL15           <---------GLK1(2)       <-----    --------->ATHB12                   --------------->AGL15 <---------ZAT6    --------->HSFB2a(2) --->ATHB1  <-----------ARR10        ---------->ID1<---------YAB1 --------->STY1(2)           ------- --->ICU4   --------->ARR11(3)      <-----------GT1--------->ICU4 <---------STY1(2)   --------->TOE2(3)   attcgacgattgaatatctatgtttgtagaatgttttttttctttttcgagttattattattagagatagctagcttcttactggaaaccatagactaaa  26769300               --------->DAG2       --------->SPL7                                               <---           --------->At4g35610  --------->ZAT6                                                <------       <-----------HVH21        --------------->AtSPL8                                       <-------  <---------AHL20(2)          --------->MYB52(1)            <---------ARR11(3)           <----------DOF2 ----TOE2(3)  ---------->DOF2--------->AHL20(2)             --------->ARR11(3)          <---------ANAC58 --->DOF2  <---------At4g35610<-----------GT1 ------->TEIL <---------CCA1(2)            <---------ANAC58   gtttttatttgtcagcaaaagtagtctacaattaactgtaccacgatgaacctctagttatatatctcatgaaaacccctaaaattgatggctttattaa  26769400  Previous    Next  AGI:  At1g70985.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G23050.1) Range:  from: 26768334    to: 26768947    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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