Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                             <---------ARR11(3)            <---------------AtSPL3     --------->CCA1(2)                   --------->AtLEC2            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----------->GT1         ------>ZmHOX2a(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC55(2)     <---------ANAC58            <---------------AtSPL8    <---------ARR14(2)                 <---------ANAC58            --------------->AtSPL8    --------->ARR14(2)                 ===================HOX2a_HOX2a            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ANAC55(2)    ====================HOX2a_HOX2a        --------->AHL20(2)            --------->ARR11(3)                <------ZmHOX2a(2)        <---------AHL20(2) --------->AHL20(2)   <---------TOE2(3)      <---------ARR14(2)    <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                --------->ARR14(2) --------->GT1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->ANAC46 ------>ZmHOX2a(1) -------TOE1(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->ANAC55(2) -------TOE2(3) ------->TEIL         <------ZmHOX2a(1)--------->ZAT6--------->ANAC55(1)---------->DOF2 >ICU4<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ----------->GT1          <---------LBD16  --------->TOE2(3)   aaggttatatttaaaatgtacttcccaaataatatagtaggatatggtataacgtaacactgcaacttatacggatcgtgcaaaatcctaaaaggccatt  26175200                                                                                   --------->ATHB12                                                                                   --------->YAB1              ------>MYB46(1)                                                      <---------ICU4              ------>MYB83                                                         <--------ATHB1             ----------->RAV1(1)                                                   --------->ATHB51            ------->GAMYB                                                         <---------YAB1           --------->MYB46(3)                                                     <---------ATHB51         <-----------GT1     <-----------GT1                                      --------->ICU4    --------->YAB1        <---------ICU4           >>>>>>>>>MYB98    <---------YAB1-------->HAHB4    --------->AHL20(2)   <---------YAB1        ----------->GT1      --------->AHL20(2)   <---------ATHB12      --------->ICU4      ---------->DOF2        <---------AHL20(2)   <---------ATHB51    <---------ICU4    ---------->DOF2   <------ZmHOX2a(1) ----------->GT1 --------   ttgcaataatataaccaacaaaaaatcatttttacaaaacatgaaaagaaagtaacatagaggaccatattaaaataggtggtaataattgcaaacaaag  26175300                                                                  --------->ZAT18                                                                  <---------ZAT14                                       ------>ZmHOX2a(2)          --------->ZAT14          <---------YAB1                                  <---------WOX13(1)              <---------ZAT18         ------>ZmHOX2a(2)                                ==============HOX2a_HOX2a   --------->TOE2(2)           --------->ARR11(3)                            <---------MYB52(1)              --------->TOE1(2)           <---------ARR11(3)               --------->ANAC46 <------ZmHOX2a(1)           --------->TOE2(3)       <---------At4g35610 -->DOF2    --------->TOE1(2)  <---------YAB1         --------->AtMYB61        <----------DOF2   aattttcacttgcacatacgatatgtgtccattaggattgatcgatgtctatacgaccaaaacctaagtgtacaaacctttcttttatctgatcttattg  26175400                                           --------->MYB46(3)                                         ----------->RAV1(1)        <---------ANAC46                 ----------->GT1        <----------ID1              <---------ANAC58                --------->DAG2       --------->DAG2              --------->ALFIN1               --------->DAG2        ------------------------>ANAC81<---------ANAC58   ------>ZmHOX2a(2)              ---------->DOF2      ---------->DOF2            --------->DAG2  --------->LBD16   -----   <---------ARR14(2)         <-----------GT1                ---------->DOF2<---------LBD16 ---------   --------->ARR14(2) --------->ZAT6--------->DAG2  ----------->GT1 ----------->GT1--------->ICU4   cctcatatatggaagaaaaaggtaacaccaatttacaaaaaggcaacaaataagaagaaaaaaaaaagtggtgtgaaatcgggaaatgatcgaagaaaga  26175500                                    <---------YAB1                                  <---------ICU4                                  --------->YAB1                                 --------->ICU4                               <---------ICU4                               --------->YAB1                                                       <                              <---------YAB1                                              ------->GAMYB                              --------->ICU4                               <---------GLK1(2)     <---                          --------->AHL20(2)                 --------->WRKY18(1)       ----------->RAV1(1)                          --------->AHL20(1)                <-----------HVH21       --------->HSFB2a(2)                         --------->YAB1 ---------->DOF2---------->DOF2   <---------ARR14(2)   -------  --------->AHL20(2)   --------->AHL20(2)       ---------->DOF2          <---------ARR11(3)   ------- ------>GT1        --------->MYB46(3)--------->YAB1   <------ZmHOX2a(1)  --------->ARR11(3) --------- ->DOF2           -------->P--------->YAB1  ---------->DOF2<----------ID1--------->ARR14(2) <--------   gaaataaaaaaacacatactaaccaaaaaataataataatcataaagaaagaaagaggaaagggtcaagagagcatatattctcttctccaacagaaccc  26175600                  <---------ANAC46            --------->ARR11(1)         <---------HSFB2a(2)         <---------------AGL15         --------->HSFB2a(2) >>>>>>>>>TBF1         --------------->AGL15        <-----------------AGL2        <-----------------AGL3        ----------------->AGL3        ----------------->AGL1        <-----------------AGL1      <-----------GT1 ---------->DOF2                                      <---------AHL20(2)       <      *TSS  <---------ARR14(2)                                          --------->ARR11(3)          - --------->YAB1   <---------ANAC58                              --------->ANAC46    --------->ARR11(3) ---------ATHB12  <---------ANAC58                            <---------ALFIN1      <---------ARR11(3) ------ALFIN1--------->CCA1(2)               ----------->GT1  --------->AtMYB61    <---------CCA1(2)< -->ANAC58  --------->ARR14(2)             ---------->DOF2   --------->MYB46(3)<---------AHL20(2)   < -->ANAC58  --------->ARR11(3)         ---------->DOF2      -------->P  <---------ARR11(3)          < >ARR14(2)  <---------ARR11(3)   ---------->DOF2        --------->TOE2(3)  --------->AHL20(2)       - -ARR14(2)--------->LBD16 ------------------------>ANAC81  --------->WOX13(1)  --------->AHL20(2)  <-   cactcatgtttccagatatggagtgaaagaagaagaaaagaaaaagaaagaaaaaaaacatcaaccactccaaagatttatatatatatctattaatctc  26175700               --------->ANAC58               --------->ANAC58               --------->ANAC46            ------->GAMYB           <---------MYB55(2)           <---------MYB52(2)           <---------MYB111(2)           --------->MYB46(3)                                                 <---------AHL20(2)   <----------DOF2                                                      <---------MYB52(1) ---------ARR11(1)                                             <---------ANAC46 -------->ARR11(3)                                  <---------AHL20(2)<---------MYB46(3) ---------ARR11(3)                            <---------ANAC58 <---------ANAC58 -----------ARR10     --------->GLK1(2)       <---------ANAC58 <---------ANAC58                 <---- ---------ARR14(2)  --------->MYB46(3)     <----------DOF2   --------->ARR11(3)                <----- -------->ARR14(2)------>MYB83        <-----------GT1   --------->AHL20(2)  <---------------AGL15 --------CCA1(2)  ------>MYB46(1)    <---------ATHB12   <---------AHL20(2)  --------------->AGL15   catatctttgccaacaaacccaacaatctttgaaaacaaatcaccctttcgtttttatttaaatttcttgggtcgtttcttaaatttgtatgtgtttatt  26175800             <---------ICU4             <--------ATHB1             --------->YAB1             ---------->DOF2                            --------->ICU4            <---------ATHB51                      --------->ANAC58            <---------ATHB12                      --------->ANAC46          <---------At4g35610            --------->ICU4                 --------->YAB1                  --------->MYB52(1)     <------ZmHOX2a(2)                     <---------ICU4       <---------ANAC58      --------->ANAC58    --------->ARR11(3)             <---------YAB1 --------->ANAC58  <-----------RAV1(1)    <---------ARR11(3)        --------->ZAT6  --------->YAB1  ------->TEIL<---------WRKY12 <---------TOE2(3) -----AHL20(2)        --------->YAB1  <---------------------WRI1<---------ANAC58      --------->ANAC58 ----YAB1 --------->YAB1 --------->YAB1 --------->YAB1---------->DOF2     <---------WRKY38(1)   aatggagatcaacaataatgccaacaatactaatactactattgataatcacaaggcaaagatgagccttgtgttgtcaacggatgctaagccaaggttg  26175900                                                                   ------->TEIL                                                                --------->ANAC58                                                                --------->ANAC55(2)                                                                <---------ANAC58                                                                --------->ANAC58                                                                <---------ANAC55(2)                                                                <---------ANAC58                                                           --------->ZAT6                                                           --------------->AtSPL3                                                           <---------------AtSPL3                                                         ------>MYB46(1)                                                         --------->MYB52(1)                                                        ----------->HVH21                                       --------->WOX13(1)------>MYB83            ------>ZmHOX2a(2)       <---------RAP2.6(3)<---------MYB46(2)        <-----------GT1          <---------ARR11(3)        --------->At5g28300<---------MYB111(1)  <----------DOF2          --------->ARR11(3)       ----------->GT1  <------ZmHOX2a(1)<----------DOF2   ------->TEIL          <-------TEIL<---------MYB52(1)<---------MYB59    ---------->ID1   aaatggacttgtgatcttcatcacaaattcatcgaagccgttaatcaacttggaggacctaacagtacgtacttttgtctttttttcatcttcattttca  26176000                               <---------MYB46(3)                             <-------GAMYB                             <---------ANAC58                             <---------ANAC58                       <---------AHL20(2)                      --------->ARR11(3)                      <---------ARR11(3)                                                            -                 <---------AHL20(2)                           --------->MYB52(1)                    <                 --------->AHL20(2)                      <---------ALFIN1                           -            <----------DOF2 <------MYB83               ----------->RAV1(1)                 ------>ZmHOX2a(1)       <---------WOX13(1)   <------MYB46(1)         --------->ANAC58                       --------->LBD16      <---------ANAC58<---------AHL20(2)            --------->ANAC46                      <---------LBD16      <---------ANAC58--------->AHL20(1)            --------->ANAC58                   --------->GLK1(2)     --------->ATHB12 <---------AHL20(1)        <---------HSFB2a(2)        <---------TOE2(3)   <-----    <---------YAB1    --------->AHL20(2)        --------->HSFB2a(2)     <---------REM1(1)----------->RAV1(2)  <---------ANAC58   ================================================================================  <---------ANAC58   <---------------AGL15<---------YAB1 --------->REM1(1) <---------TOE1(3)   <-----   tgtttcttgattgtctttttttaatatatttggttgttctgtttatgtttgtagaagcaacacctaagggtttgatgaaggttatggagattcctgggct  26176100  Previous    Next  AGI:  At1g69580.1    Description:  transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G04030.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48371.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 26175606    to: 26177275    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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