Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->MYB46(3)                                          --------->REM1(1)                                        ----------->RAV1(1)                     ----------->RAV1(2)                                     --------->ANAC58                       ---------->DOF2                                     --------->ANAC58                     <------ZmHOX2a(1)            --------->ARR14(2)      --------->DAG2                       --------->LBD16 ----->YAB1 <---------ARR14(2)     ---------->DOF2               --------------->AGL15           <--- ----->TOE2(3)               ---------->DOF2                   --------->ARR11(3)             <------ ----->TOE1(3)  ------>ZmHOX2a(1)--------->ARR11(3)            <---------ARR11(3)             ------- ----At5g28300 --------->TOE2(3)--------->YAB1   ----------->RAV1(1)   <---------LBD16     <---------At4g35610   cataacacatttcaaatcctcaattccaaaacaaagataaagcaacaacaacaacaaaacaacaataccttgttcaggaaaagcctggaacgtagcagat  25952500                                                                                       ==============                                                                                       ==============                                                                                       ----------->RAV1(2)                                                                                       ==============                                                                                       ------>ZmHOX2a(2)                                                                                      ===============                                                                                      ===============                                                                                      ===============                                                                                      <------ZmHOX2a(2)                                                                                     --------->AGP1                                                                                     --------->ARR14(3)                                                                                     <---------GLK1(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                                                     <---------ARR14(3)                                                                                ----------->RAV1(1)                                                                                ===================RAV                                                                              --------->MYB46(3)                                                                            --------->DEAR3(1)                                                                            <---------ALFIN1                                                                            --------->AtMYB61          <------------MYB.PH3(2)                        <-------TEIL <---------ARR14(2)     ------>ZmHOX2a(2)     <----------DOF2                                   --------->ARR14(2)  --------->MYB46(3)========    --------->TOE1(3)                                  <---------GLK1(2)--------->MYB46(3) <---------ARR14(2)    --------->TOE2(3)                                  <---------ARR14(2)--------->AtMYB61 --------->ARR14(2) --------HVH21             <---------YAB1        --------->ZAT2       --------->ARR14(2) ------>ZmHOX2a(1) ---At4g35610            --------->YAB1     --------->MYB52(1)--------->GLK1(1)--------->AtMYB61  --- -->At4g35610           <---------ATHB12  <---------MYB52(2)  <---------GLK1(1)<---------ALFIN1------   gtcaaacctttaacaaactctctcaaatcatcagtaataccaaaactaacaagctcagattcagaaatctcagaaccaccaccaccagatcctgatcctc  25952600       --------->LBD16      <-----------RAV1(2)                  ------>ZmHOX2a(2)    ------>ZmHOX2a(1)                     <---------At4g35610 ==========HOX2a_HOX2a                   <---------ARR11(3)                             <---------ANAC46 ====HOX2a_HOX2a                         <---------ARR14(2)                    --------->ARR14(2) =HOX2a_HOX2a                 <---------AHL20(2)                               <---------ARR14(2) ==========HOX2a_HOX2a       --------->AHL20(2)                              ----------->ARR10     -- ====HOX2a_HOX2a    <------NtERF2        --------->ARR14(2)                --------->At4g35610   ---- =HOX2a_HOX2a     --------->ETT(1)    <---------HSFB2a(2)                  <---------At4g35610   ---- ==========HOX2a_HOX2a  <---------ATHB12 <---------AGP1                    <---------ZAT2<-------GAMYB --->ZmHOX2a(1)  --------->DDF1       --------->HSFB2a(2)             <----------DOF2<----------DOF2 >ZmHOX2a(1)     --------->RAP2.6(3) <---------LBD16           --------->TOE1(2) ------>ZmHOX2a(2) <-   ctaatcctccaggtataatgtcggcaatcgattttatattctggatctgatcagcttgtttcaatgctacgactttgagctgatccgctttcgttgaaac  25952700             <----------DOF2             --------------------->WRI1        <---------ARR14(2)        --------->GLK1(1)            <------NtERF2 --------->ZAT2                     ------>NtERF2                                <---------HSFB2a(2) <---------ZAT2                    <---------DEAR3(1)                       <---------HSFB2a(1) --------->At4g35610               --------->DEAR3(1)                       --------->HSFC1(2) <---------At4g35610              <------NtERF2                             --------->HSFB2a(1) -------->CDC5              <-----------HVH21                     <----------DOF2--------->HSFB2a(2) ----->TOE2(3)              ------>NtERF2  <---------LBD16      --------->At4g35610    <---------ZAT18 ----->TOE1(3) --------->WRKY12 <---------DEAR3(1)              <---------At4g35610    --------->ZAT18 ----------RAV1(2)         --------->DEAR3(1)            ------>ZmHOX2a(2)  <---------HSFC1(2)   ctcagcagcgaattcctttgacttcttcgccgtctcggcgacgaactcggagacattgatcgaatcagctttcttagaagcttcgagagcgaactctttg  25952800                           <---------TOE2(3)                        <---------WOX13(1)                   --------->bZIP60(1)                  ----------->STF1                ----------->TGA1                          <---------TOE1(3)                ----------->HVH21                         <---------TOE2(3)             <---------ANAC46                    <---------ZAT14                      <---------HSFB2a(2)          <---------ARR14(2)    <-----------RAV1(1)  <---------ZAT6 --------->GLK1(1) --------->HSFB2a(2)          --------->ARR14(2)   ------->TEIL  --------->ATHB12<---------ANAC46 <---------At4g35610    <-----------GT1<---------bZIP60(1)      <---------YAB1<---------YAB1   <---------At4g35610   gattttttagcggtttcggtgacgagattgacgaatgttgttgaagatgattgtagtgttatggtttgtgatttcttcgctgcttcttctgcaaacgatt  25952900                                                                       <----------DOF2             <-                       <---------AHL20(2)                  ----------->GT1                         --               ------>ZmHOX2a(2)                          ------>ZmHOX2a(2)                        --              <------ZmHOX2a(2)                          <------ZmHOX2a(2)                        ---             --------->AGP1                             <---------ARR14(2)                  ---------             <---------ARR14(2)                         <---------AGP1<---------ANAC58  <---------TOE2(3)             --------->ARR14(2)                         --------->ARR14(2)           --------->AHL20(2)             <---------AGP1                            <---------CCA1(2)    ----------->TGA1<--------             <---------ARR11(3)                <-----------GT1  <---------YAB1 --------->ANAC58   ---             --------->ARR11(3)            <---------AHL20(2)<---------MYB52(1)--------->ANAC58  ----            <---------CCA1(2)       <-------GAMYB <----------DOF2     <---------ANAC58---------->DOF2           ----------->ARR10       --------->ALFIN1 <---------LBD16 <-----------GT1  <---------AHL20(2)   tcgctctcttccatagatcttccatttttttctcggtgtgttgattttttttctttcggatctgttatttttgcgttactgacgaaattaaaggtaacgt  25953000                                  <---------AtMYB61         --------->LBD16       <----------CDC5       <---------LBD16       --------->ANAC58 --------ANAC55(2)           --------->ANAC46 ------->ANAC58              --------->AtLEC2                                           ------------>CBF ------->ANAC58  <---------HSFB2a(1)                                --------->AtMYB61  <<<<<<<<<<<<<< ------>RAP2.6(3)<---------HSFC1(2)                                 <---------ALFIN1   >>>>>>>>>>>>>> >MYB52(1)<------NtERF2  <-----------HVH21                    --------->PCF2       <------------CBF -DOF5.7(2)      --------->HSFC1(2)                      <------------CBF  <---------TOE1(2) -------- ------>SPL7 ----------->GT1 --------->ANAC58<----------DOF2 <-----------HVH21    ------>ZmHOX2a(1) ----->MYB52(1)  --------->HSFB2a(1) --------->ALFIN1   --------->ATHB12  ------>ZmHOX2a(1) <--------   tacggcaaacgcggagggaaacttctgagtcacgcagaggtgtttgacttttaagagtttattggtcgcaccattcctagtttcctattggccaatggat  25953100                                 --------->AHL20(2)                      ----------->GT1 <<<LFY           --------->CCA1(2) >>>LFY          <---------ARR14(2)                         ---------->DOF2 --->GT1<---------ANAC58         <---------AHL20(2)      <---------TOE2(3)                          - -ATHB12<---------ANAC58   <---------YAB1         --------------->AGL15     --------->AHL20(2)-------   aattttgttttcgtttgaaaatatgggttataattttaaatatgaaatgtttcaagtttaagaaaagaagtattcacataaaataagtgtttgaaacaaa  25953200                        <--------HAHB4                           <------MYB83                        --------->ATHB51                         <------MYB46(1)                        <---------ICU4                     <---------TOE1(3)                       --------->ICU4                      <---------TOE2(3)             <---------ANAC55(2)                          ---------->DOF2    ----------->GT1    <---------YAB1              <---------AHL20(2)                       <-------- --------->DOF2----------->HVH21      --------->ZAT6 <---------YAB1          --------->REM1(1) --->DOF2    --------->ANAC55(2)<-------TEIL      <---------YAB1--------->MYB59 --------->YAB1 <-----   gtgaaagtgtgaaatacttgacaccataattaagtccataactctaccaatttttatttttaaagttaggtttagacttacatcataacaacattttata  25953300                                                     --------->ANAC58                                                     <----------ID1                                                     --------->ANAC58                                              <---------TOE1(1)                                              <---------TOE2(1)                                         --------->MYB59                                     --------->ARR11(3)                                     <---------GLK1(2)                                     <---------ARR14(2)        --------->YAB1               <---------ARR11(3)     --------->YAB1                  --------->ARR14(2) -AHL20(2)      --------->YAB1    <-----------------AGL1    <---------AHL20(2)              --------- ----CCA1(2)   <---------YAB1<-----------RAV1(1)  <------ZmHOX2a(1)        --------->At4g35610   tccactacaataatcttatgataactatattgtgttgcagattttggtactaggaacgccaaataatcgataaaaccagcacaactagacctcaaatttg  25953400  Previous    Next  AGI:  At1g69030.1    Description:  similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G26300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73547.1); contains InterPro domain BSD (InterPro:IPR005607) Range:  from: 25950928    to: 25952925    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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