Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------->
MYC3
===========
<-------
MYC3
--------->
CCA1(2)
--------->
ANAC46
<------
ZmHOX2a(2)
<---------
ALFIN1
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ANAC58
<---------
ARR11(3)
------>
MYB46(1)
--------->
ANAC46
--------->
ARR11(3)
--------->
ARR14(2)
----------->
GT1
--------->
ANAC58
--------->
ARR14(2)
------>
MYB83
---------->
DOF2
------->
TEIL
--------->
YAB1
---------->
DOF2
aaaacctatccacacgttgtaaaagcagagaaaaaatgaaactttgctaaatacaatcacaccatgtaagagtaagagacataacaaagaagatccaatt
25489700
--------->
MYB52(1)
----------->
HVH21
----------->
TGA1
<---------
ZAT2
--------->
ZAT2
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ANAC46
<---------
TOE2(3)
--------->
MYB52(1)
<------
ZmHOX2a(1)
--------->
At4g35610
<------
ZmHOX2a(1)
<---------
ARR11(3)
---------->
DOF2
--------->
ZAT18
<---------
At4g35610
<---------
TOE2(3)
=========================
HOX2a_HOX2a
----------->
ARR10
------->
TEIL
---------->
DOF2
<XXXX
gtacaaaattgaaaagagagaggagaagagaggactaac
gtagatattgagctgacgaatgaagctagagaaattgctgtgtttaaagtatttaggcaag
25489800
<---------
DOF5.7(2)
--------->
MYB52(1)
<---------
ARR11(3)
<---------
ANAC46
<---------
MYB46(3)
<---------
ZAT18
----
--------->
ABI4(2)
--------->
ZAT18
----
<---------
AtMYB61
<---------
ZAT14
<------
--------->
ALFIN1
--------->
At4g35610
---------
<---------
DEAR3(1)
<-----------
GT1
-------->
P
<---------
DEAR3(1)
------->
TEIL
--------->
MYB46(3)
XXXXXXXXXXXXXXXXX
MIR4221
--------->
ARR11(3)
--------->
ZAT14
<---------
YAB1
--------->
YAB1
agttgaacagagaagacggtggtgtccaagataacgaagctattatctgcacttggactccatgagattatagagtcagtagtagaatcatcaaccatat
25489900
--------->
SPL7
--------->
ORA47(1)
<---------
SPL7
<-----------
HVH21
>>>>>>>>>
TBF1
--------->
DEAR3(1)
--------->
ZAT14
<---------
ALFIN1
<---------
ALFIN1
--------->
DEAR3(1)
<------
NtERF2
--------->
AtMYB61
--------->
ATERF1(1)
<---------
MYB55(2)
<---------
RAP2.3(1)
--------->
DEAR3(1)
<---------
ATERF1(1)
<---------
ALFIN1
------>
NtERF2
--------->
AtMYB61
--------->
PCF2
<---------
MYB55(2)
--------->
ANAC46
--------->
MYB46(3)
<---------
DEAR3(1)
------>
MYB83
<---------
MYB52(1)
--------->
DEAR3(1)
--------->
ANAC46
--------->
RAP2.3(1)
<---------
ALFIN1
------->
GT1
<---------
ATERF1(1)
--------->
MYB46(3)
--------->
GLK1(1)
----->
YAB1
<---------
DEAR3(1)
<---------
MYB55(2)
<---------
GLK1(1)
---
CCA1(2)
--------->
MYB52(1)
>>>>>>>>>
TBF1
--------->
MYB46(3)
<---------
HSFB2a(2)
>
YAB1
--------->
ARR14(2)
>>>>>>>>>
TBF1
------>
MYB46(1)
<-----------
GT1
<--------
cgtaacattttctcaagaacggcgccactgaagaagaagaagaagacccaccaccaccgtccgtcgatttcaccat
aatcgagaaatctctaaactttag
25490000
<------
ZmHOX2a(1)
<----------
ID1
----------->
GT1
--
<---------
TOE2(3)
<----------
DOF2
-------
>>>>>>>>>
SARD1
--------->
YAB1
--------->
ARR14(2)
<------
ZmHOX2a(1)
>>>>>>>>>
CBP60g
--------->
ANAC58
<---------
ARR14(2)
=========
--
DOF2
<---------
GLK1(1)
--------->
ANAC58
--------->
GLK1(2)
<-----------
RAV1(1)
atgaaattttgaattctgaaatttgggattgaatcgattagtcgcaagaataaggaaaaatgaagagaatttgggattggggtttatgtgggaaggagat
25490100
<---------
CCA1(1)
<---------
MYB52(1)
<---------
RVE1(1)
<-------
GAMYB
------>
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ANAC58
<---------------------
WRI1
>>>>>>>>>
TBF1
--------->
ARR11(3)
<---------
ANAC58
*
TSS
---------->
DOF2
<------
ZmHOX2a(1)
<<<<<<<<<
RAP2.2
----->
TEIL
<---------
ARR14(2)
--------->
ANAC58
<---------
At5g28300
-->
At4g35610
--------->
ARR14(2)
--------->
ANAC46
--------->
MYB52(1)
============================
HOX2a_HOX2a
--------->
ANAC58
----------->
HVH21
gaaacttgtgcgttgggcaagggat
cgtcgttcacatcaaaggaaatttcaaggaagagaggaagaagaagtcacggttttagatatttttaagtctttg
25490200
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
CCA1(1)
----------->
GT1
<---------
RVE1(1)
--------->
ANAC46
<----------
DOF2
<---------
ARR11(3)
<-----------
GT1
<-----------
GT1
<----------
--------->
ARR11(3)
<-----------
GT1
--------->
AHL20(2)
--------->
DAG2
--
--------->
MYB52(1)
<---------
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
---------
----------->
RAV1(1)
--------->
AHL20(2)
--------->
TOE2(3)
--------->
TOE2(3)
----------->
GT1
--
gcccaacagatatttttatttaaaaaaataacattttacgacgttaataaaacatatttacaactttaatggaaatagaaaagtaaaacattttacgaca
25490300
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
ARR11(3)
<---------
AHL20(1)
------->
TEIL
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
-
GT1
--------->
ARR11(3)
--------->
YAB1
<---------
AHL20(2)
------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC46
<------
ZmHOX2a(1)
>
ANAC46
<-----------
GT1
<---------
AHL20(2)
<---------
ATHB12
<---------
TOE1(2)
------->
AHL20(2)
<---------
YAB1
----------->
GT1
--------->
AHL20(2)
<---------
ANAC46
--------->
MYB59
ataaaaaaatattttacaatttttaatgaaaatagagaagttaatataaaaatttaaattaaatcaaatgaatgttgtgtattttcgaatgttaggactt
25490400
<------
ZmHOX2a(1)
<---------
AHL20(2)
<---------
TOE2(3)
<---------
YAB1
--------->
ICU4
<--------
HAHB4
------>
ZmHOX2a(2)
--------->
YAB1
=================================
HOX2a_HOX2a
<---------
ICU4
===================
HOX2a_HOX2a
<---------
TOE1(2)
==================================
HOX2a_HOX2a
--------->
ARR11(3)
<------
ZmHOX2a(2)
<---------
ARR11(3)
<---------
AHL20(2)
====================
HOX2a_HOX2a
-----
--------->
GLK1(1)
<---------
YAB1
--------->
ARR11(3)
-----
----------->
GT1
-------->
ATHB1
<---------
ARR14(2)
-------
<------
ZmHOX2a(1)
--------->
ATHB51
<---------
ARR11(3)
--------->
ANAC46
<---------
TOE2(3)
--------->
ICU4
<-----------
TGA1
<---------
YAB1
------>
ZmHOX2a(1)
<---------
TOE1(3)
<------
ZmHOX2a(1)
<---------
ICU4
--------->
ARR14(2)
--------->
ARR14(2)
aataagggtttaaggatgtgaaatcttaggaattattattttaaaatcatttcgtcatttagggatcttgatgatgaggatgcccaatctcctatgccac
25490500
<---------
ANAC46
<---------
ANAC58
--------->
ZAT18
<---------
ANAC58
<---------
ZAT14
<-----------
RAV1(1)
<---------
AtLEC2
--------->
ALFIN1
<-----
---->
bZIP60(2)
<-------
TEIL
<---------
ANAC58
--------->
LBD16
<-----
---->
REM1(1)
----------->
GT1
<---------
ANAC46
--------->
GLK1(2)
--------->
DAG2
---->
RAV1(1)
--------->
MYB52(2)
<---------
ANAC58
---------->
DOF2
---------->
DOF2
atcatgttgcctaagattagttacatggacatcacattgagcttggggtgagagttcaccataaactaaaagattccagattagacaatccaaaaggtca
25490600
Previous
Next
AGI:
At1g67970.1
Description:
AT-HSFA8 (Arabidopsis thaliana heat shock transcription factor A8); DNA binding / transcription factor. Identical to Heat stress transcription factor A-8 (HSFA8) [Arabidopsis Thaliana] (GB:Q9S7U5); similar to HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17750.1); similar to unknown [Populus trichocarpa] (GB:ABK95426.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:
from: 25488362
to: 25490125
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version