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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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           ------->MYC3                                                                  ===========
           <-------MYC3                                                                  --------->CCA1(2)
          --------->ANAC46                                                               <------ZmHOX2a(2)
        <---------ALFIN1                                                                <---------ARR14(2)
   <---------ARR14(2)                                  --------->ANAC58                 <---------ARR11(3)
   ------>MYB46(1)                                     --------->ANAC46                 --------->ARR11(3)
   --------->ARR14(2)   ----------->GT1                --------->ANAC58                 --------->ARR14(2)
   ------>MYB83  ---------->DOF2   ------->TEIL      --------->YAB1              ---------->DOF2
 
aaaacctatccacacgttgtaaaagcagagaaaaaatgaaactttgctaaatacaatcacaccatgtaagagtaagagacataacaaagaagatccaatt  25489700
                                                 --------->MYB52(1)
                                                ----------->HVH21
                                                ----------->TGA1
                                              <---------ZAT2
                                              --------->ZAT2
                                       <---------ARR14(2)
                                       --------->ARR11(3)
                                  <---------ANAC46
                                 <---------TOE2(3)
                                --------->MYB52(1)
                            <------ZmHOX2a(1) --------->At4g35610
                  <------ZmHOX2a(1)    <---------ARR11(3)
        ---------->DOF2    --------->ZAT18    <---------At4g35610                <---------TOE2(3)
=========================HOX2a_HOX2a ----------->ARR10    ------->TEIL          ---------->DOF2<XXXX
 
gtacaaaattgaaaagagagaggagaagagaggactaacgtagatattgagctgacgaatgaagctagagaaattgctgtgtttaaagtatttaggcaag  25489800
                            <---------DOF5.7(2)
                            --------->MYB52(1)
                          <---------ARR11(3)
                  <---------ANAC46
                <---------MYB46(3)          <---------ZAT18                                     ----
                --------->ABI4(2)           --------->ZAT18                                     ----
               <---------AtMYB61            <---------ZAT14                                  <------
               --------->ALFIN1          --------->At4g35610                               ---------
               <---------DEAR3(1)       <-----------GT1                                  -------->P
            <---------DEAR3(1)   ------->TEIL                                          --------->MYB46(3)
XXXXXXXXXXXXXXXXXMIR4221  --------->ARR11(3)--------->ZAT14    <---------YAB1       --------->YAB1
 
agttgaacagagaagacggtggtgtccaagataacgaagctattatctgcacttggactccatgagattatagagtcagtagtagaatcatcaaccatat  25489900
                                                        --------->SPL7
                                                      --------->ORA47(1)
                                                      <---------SPL7
                                                      <-----------HVH21
                             >>>>>>>>>TBF1           --------->DEAR3(1)
                         --------->ZAT14          <---------ALFIN1
                     <---------ALFIN1             --------->DEAR3(1)
                    <------NtERF2                 --------->AtMYB61
                    --------->ATERF1(1)          <---------MYB55(2)
                   <---------RAP2.3(1)         --------->DEAR3(1)
                   <---------ATERF1(1)         <---------ALFIN1
                   ------>NtERF2               --------->AtMYB61
                  --------->PCF2              <---------MYB55(2)
                  --------->ANAC46            --------->MYB46(3)
                  <---------DEAR3(1)         ------>MYB83  <---------MYB52(1)
                  --------->DEAR3(1)        --------->ANAC46
                 --------->RAP2.3(1)        <---------ALFIN1
------->GT1     <---------ATERF1(1)        --------->MYB46(3)                   --------->GLK1(1)
----->YAB1     <---------DEAR3(1)          <---------MYB55(2)                   <---------GLK1(1)
---CCA1(2)   --------->MYB52(1)    >>>>>>>>>TBF1 --------->MYB46(3)         <---------HSFB2a(2)
>YAB1        --------->ARR14(2) >>>>>>>>>TBF1------>MYB46(1)      <-----------GT1          <--------
 
cgtaacattttctcaagaacggcgccactgaagaagaagaagaagacccaccaccaccgtccgtcgatttcaccataatcgagaaatctctaaactttag  25490000
                                                  <------ZmHOX2a(1)
                                                 <----------ID1
                                                 ----------->GT1                                  --
                                                <---------TOE2(3)             <----------DOF2-------
                 >>>>>>>>>SARD1             --------->YAB1      --------->ARR14(2)         <------ZmHOX2a(1)
                 >>>>>>>>>CBP60g          --------->ANAC58      <---------ARR14(2)         =========
--DOF2  <---------GLK1(1)                 --------->ANAC58      --------->GLK1(2) <-----------RAV1(1)
 
atgaaattttgaattctgaaatttgggattgaatcgattagtcgcaagaataaggaaaaatgaagagaatttgggattggggtttatgtgggaaggagat  25490100
                                                                                <---------CCA1(1)
        <---------MYB52(1)                                                      <---------RVE1(1)
       <-------GAMYB ------>ZmHOX2a(2)                                         <---------ARR11(3)
      <---------ANAC58             <---------------------WRI1>>>>>>>>>TBF1     --------->ARR11(3)
      <---------ANAC58  *TSS      ---------->DOF2        <------ZmHOX2a(1)    <<<<<<<<<RAP2.2
----->TEIL         <---------ARR14(2)          --------->ANAC58      <---------At5g28300
-->At4g35610       --------->ARR14(2)          --------->ANAC46     --------->MYB52(1)
============================HOX2a_HOX2a        --------->ANAC58    ----------->HVH21
 
gaaacttgtgcgttgggcaagggatcgtcgttcacatcaaaggaaatttcaaggaagagaggaagaagaagtcacggttttagatatttttaagtctttg  25490200
                <---------AHL20(2)
                --------->AHL20(2)
            <---------AHL20(2)
           <---------YAB1
          <---------AHL20(2)
      <---------CCA1(1)              ----------->GT1
      <---------RVE1(1)           --------->ANAC46          <----------DOF2
     <---------ARR11(3)         <-----------GT1       <-----------GT1                    <----------
     --------->ARR11(3)  <-----------GT1    --------->AHL20(2)              --------->DAG2        --
--------->MYB52(1)  <---------AHL20(2)      <---------AHL20(2)             ---------->DOF2 ---------
----------->RAV1(1) --------->AHL20(2)--------->TOE2(3)     --------->TOE2(3)----------->GT1      --
 
gcccaacagatatttttatttaaaaaaataacattttacgacgttaataaaacatatttacaactttaatggaaatagaaaagtaaaacattttacgaca  25490300
      <---------AHL20(1)
      --------->AHL20(1)
      --------->AHL20(2)
    --------->AHL20(1)
    <---------ARR11(3)
    <---------AHL20(1)                                             ------->TEIL
 --------->AHL20(2)                                     <---------AHL20(2)
 <---------AHL20(2)  <---------TOE2(3)                 --------->AHL20(2)
-GT1--------->ARR11(3) --------->YAB1                  <---------AHL20(2)
------->YAB1       <---------AHL20(2)             <---------AHL20(2)     <---------ANAC46  <------ZmHOX2a(1)
>ANAC46   <-----------GT1                   <---------AHL20(2)  <---------ATHB12    <---------TOE1(2)
------->AHL20(2)  <---------YAB1  ----------->GT1 --------->AHL20(2)   <---------ANAC46  --------->MYB59
 
ataaaaaaatattttacaatttttaatgaaaatagagaagttaatataaaaatttaaattaaatcaaatgaatgttgtgtattttcgaatgttaggactt  25490400
                                                                          <------ZmHOX2a(1)
                                 <---------AHL20(2)                     <---------TOE2(3)
                               <---------YAB1                      --------->ICU4
                             <--------HAHB4                   ------>ZmHOX2a(2)
                             --------->YAB1                   =================================HOX2a_HOX2a
                             <---------ICU4                   ===================HOX2a_HOX2a
                       <---------TOE1(2)                     ==================================HOX2a_HOX2a
                  --------->ARR11(3)                         <------ZmHOX2a(2)
                  <---------ARR11(3)<---------AHL20(2)       ====================HOX2a_HOX2a   -----
                 --------->GLK1(1)<---------YAB1            --------->ARR11(3)                 -----
            ----------->GT1  -------->ATHB1                 <---------ARR14(2)               -------
          <------ZmHOX2a(1)  --------->ATHB51               <---------ARR11(3)            --------->ANAC46
        <---------TOE2(3)   --------->ICU4       <-----------TGA1  <---------YAB1       ------>ZmHOX2a(1)
        <---------TOE1(3)<------ZmHOX2a(1) <---------ICU4   --------->ARR14(2)    --------->ARR14(2)
 
aataagggtttaaggatgtgaaatcttaggaattattattttaaaatcatttcgtcatttagggatcttgatgatgaggatgcccaatctcctatgccac  25490500
                   <---------ANAC46
     <---------ANAC58                              --------->ZAT18
     <---------ANAC58                              <---------ZAT14
<-----------RAV1(1)<---------AtLEC2         --------->ALFIN1                                  <-----
---->bZIP60(2)    <-------TEIL            <---------ANAC58               --------->LBD16      <-----
---->REM1(1)  ----------->GT1             <---------ANAC46           --------->GLK1(2)    --------->DAG2
---->RAV1(1)  --------->MYB52(2)          <---------ANAC58      ---------->DOF2         ---------->DOF2
 
atcatgttgcctaagattagttacatggacatcacattgagcttggggtgagagttcaccataaactaaaagattccagattagacaatccaaaaggtca  25490600
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AGI:  At1g67970.1   
Description:  AT-HSFA8 (Arabidopsis thaliana heat shock transcription factor A8); DNA binding / transcription factor. Identical to Heat stress transcription factor A-8 (HSFA8) [Arabidopsis Thaliana] (GB:Q9S7U5); similar to HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17750.1); similar to unknown [Populus trichocarpa] (GB:ABK95426.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:  from: 25488362    to: 25490125    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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