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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                             <---------ANAC46
           <---------SPL7                                                  <---------MYB46(3)
          --------->TOE2(1)                                               --------->ALFIN1
         ---------->ID1                                          ------>NtERF2
   <---------ANAC58             <----------DOF2                 --------->ANAC46 <------ZmHOX2a(1)
   <---------ANAC58     ----------->ARR10          <---------ZAT14     --------->ALFIN1<------ZmHOX2a(1)
-------GAMYB        <------ZmHOX2a(1)              --------->ZAT14     <---------AtMYB61      <-----
 
ctcgttgagttcgtcgtactcgaggataagtttcgcttgaagaagacgatgctctgtagttgtatcgacgcgagatggtggtgaggaagaggacggagga  24932100
                                                       <---------ZAT18
                                                     <------NtERF2
                                                     ------>NtERF2
                                                    --------->LBD16
                                                    <---------RAP2.3(1)
                                                   <---------RAP2.3(2)
                                                   <---------DEAR3(1)
                                                   <---------ANAC46
                                                  <---------LBD16
              --------->LBD16                  <---------ANAC58                     <----------DOF2
          --------->GLK1(2)                   --------->ZAT2                  <---------REM1(1)
          --------->ARR14(2)                  --------->HSFB2a(1)          <---------MYB46(3)
          <---------ARR14(2)                  <---------ZAT2             <-------GAMYB           ---
         <---------GLK1(2)                    --------->HSFC1(2)        --------->MYB52(2)      <---
<------ZmHOX2a(1)                             <---------HSFC1(2)        <-----------RAV1(1)   ------
-ZmHOX2a(1) <---------LBD16   <---------REM1(1)<---------ANAC58         <---------MYB46(3)    <-----
 
gaaggagagagagattccggtgagaagattgagttgtagagtgatgcgaagcttgcggcgaactcttcttggtgtttgttgttgaagctttgttcagaga  24932200
                --------------------->WRI1
               <---------DEAR3(1)              ------>ZmHOX2a(2)
              <------NtERF2                   <------ZmHOX2a(2)
             <---------ERF1                  <---------ARR11(3)
             ------>NtERF2                   --------->ARR11(3)
             <---------ORA47(2)              --------->AGP1
             <---------RAP2.3(1)             <---------AGP1
             <---------DEAR4(2)              --------->ARR14(2)
            --------->ATERF1(2)            ----------->ARR10
            <---------RAP2.3(2)         --------->STY1(2)
            <---------RAP2.3(3)         <---------STY1(2)
            <---------RAP2.6(2)        --------->ANAC58         <------NtERF2
            <---------DEAR3(1)         --------->ANAC58         --------->LBD16
            <---------ANAC46       --------->ANAC58             ------>NtERF2                   ----
           <---------ABI4(1)       --------->ANAC58           --------->ATERF1(1)               <---
          <---------RAP2.3(1)      <---------ANAC55(2)        <------NtERF2                     ----
          <---------ATERF1(1)      --------->ANAC55(2)       ------>NtERF2                      <---
         <---------DEAR3(1)     --------->ARR14(2)           <---------ATERF1(1)          <---------HSFC1(1)
----------->HVH21               <---------ARR14(2)           <---------RAP2.3(1)          --------->HSFC1(1)
--->ZmHOX2a(2)--------->ATERF1(1)  --------->ANAC46         --------->ANAC46              --------->HSFB2a(2)
---ZmHOX2a(2)<---------ATERF1(1)<---------MYB52(1)          <---------DEAR3(1)<-----------RAV1(1)
--->GLK1(1)--------->ATERF1(1) <-------GAMYB <---------ARR14(2)--------->DEAR3(1)         <---------HSFB2a(2)
----GLK1(1)<------NtERF2       <-----------HVH21     --------->ZAT6      >>>>>>>>>>>>>>>>>LFY-------
 
tcggtgatagtggaggcggcgatgagtttatcgccgttacgcaagctagatctgtaacagtagacgccgcgagtttctccattgttgcaatttctcgaaa  24932300
                                               ------>ZmHOX2a(2)
                                              --------->CCA1(2)
                                              <------ZmHOX2a(2)
                                             --------->ARR14(2)
  ------>ZmHOX2a(1)                          <---------AGP1
  --------->LBD16                            --------->ARR11(3)                        --------->ARR11(3)
----->HSFB2a(1)                              --------->AGP1                            <---------ARR11(3)
------HSFC1(2)                               <---------ARR11(3)          --------->HSFC1(2)
----->HSFC1(2)                          <---------MYB52(1)       <---------ARR14(2)  ----------->GT1
------HSFB2a(1)                    <---------ARR14(2)         --------->YAB1    --------->LBD16
--->DOF2                           --------->ARR14(2)   --------->YAB1   <---------HSFC1(2)
 
gcttcctgaagaagataacacagaaattgacaaaattgaatccgtttagatctacaaaatcacaatcggaaactgaaacttcccagagaagataataaga  24932400
                                                                                              ------
                                                                                              <-----
                                                                                              <-----
                                                                                            <-------
                                                                                            --------
                                                                  --------->CCA1(2)         <-------
                                                                 --------->ARR11(3)       <---------
                                                                 <---------ARR11(3)       <---------AHL20(2)
                                                                 --------->ARR11(1)       --------->AHL20(2)
                                                                 *TSS                   <-----------TBP
                                                      --------->At5g28300               --------->AHL20(2)
                                                     ----------->GT1                  <-----------TBP
                                                ---------->DOF2<---------YAB1         --------->AHL20(2)
                  <----------DOF2             ---------->DOF2  <---------TOE2(3)      <---------AHL20(2)
  <---------------AtSPL8                ---------->DOF2    XXXXXXXXXXXXXXXXXXXX>MIR774B <---------AHL20(2)
  <---------------AtSPL3          ---------->DOF2   <---------DEAR3(1)              <-----------TBP
 
gcgagagagtacctgaattagctttgaaacttctcagagaagcgaaagagaaagagcggtgaaattaagatatgaacgatgctctgtatatatatatata  24932500
                                                   --------->LBD16          --------->ANAC58
--->AHL20(2)                                      <---------LBD16           --------->ANAC58
----AHL20(2)                              <---------ARR11(3)                --------->ANAC46
------TBP                     ---------->DOF2    <---------LBD16            --------->ANAC55(2)
----TBP                    >>>>>>>>>TBF1  --------->ARR11(3)                <---------ANAC55(2)
->AHL20(2)             <------ZmHOX2a(1) --------->YAB1                   <-----------GT1       ----
--AHL20(2)          <------ZmHOX2a(1)   ----------->GT1        <---------HSFB2a(2)            ------
--TBP           --------->ALFIN1      ---------->DOF2          --------->HSFB2a(2)           -------
 
tatagagagaaccagagaggtgaggaggaagaagaaagagagaaagataatatgcgggagagactacgagaagattgttacgctacttaatctagaccat  24932600
                       <---------HSFB2a(2)
                 ------>ZmHOX2a(2)
                <------ZmHOX2a(2)                                                    <------ZmHOX2a(1)
               <---------ARR11(3)                                              <---------ZAT14
               <---------ARR14(2)                                              --------->ZAT14
               --------->ARR11(3)                                              --------->REM1(2)
               --------->ARR14(2)                                             --------->ALFIN1
               --------->GLK1(2)                                            <---------ANAC46
               <---------AGP1                                              <-----------------------TaNAC69(2)
      --------->AHL20(2)                                               <---------ANAC46
----->SPL7    <------ZmHOX2a(1)                 --------->MYB52(1)     <---------ANAC55(2)        <-
--->TOE1(2) <---------TOE1(3)          --------->AHL20(2)<---------ANAC58 <---------ZAT14         <-
-->AtMYB61  <---------TOE2(3)          <---------AHL20(2)<---------ANAC58 --------->ZAT14         <-
 
acgatgagattatttaaggatctgtttgagaagcgagtgtatttaattggataacgaattgcttcttcatggttaagtgaagtgtagaggaatatttctc  24932700
              ------>NtERF2
             --------->ANAC46
             --------->ANAC58
             --------->ANAC58        --------->GLK1(1)
           <---------ANAC58         <---------ARR11(3)
           <---------ANAC58     <---------DOF5.7(2)
        <----------DOF2         ---------->DOF2
  <----------DOF2        --------->ARR14(2)
------>MYB83<---------LBD16   <---------MYB52(1)
------>MYB46(1)<------NtERF2----------->GT1
--------MYB111(2)        <---------ARR14(2)            <---------YAB1                       <-------
--------MYB46(2)--------->DEAR3(1)  --------->ARR11(3) <---------AHL20(2)        ----------->RAV1(1)
--------MYB111(1)------>NtERF2--------->DOF5.7(2)  <---------GLK1(2)            --------->MYB46(3)
 
acctactttcactttcgcgccaacttcagaaccgttaaagatttctatgtaacagaatattatttgttttttagataacttcaacaacaaaactagtgtt  24932800
                                      <---------AHL20(2)             <---------YAB1
                                      --------->AHL20(2)          <---------YAB1
                          <---------AHL20(2)                      <---------TOE1(3)
                         <---------AHL20(2)                       <---------TOE2(3)               --
                         --------->AHL20(1)                   --------->TOE1(3)      <-----------GT1
--ZAT6   <-------TEIL    --------->AHL20(2)                 <---------TOE1(3)     --------->YAB1 ---
 
tagttttacacatacagtgagaacaaaatttaatattctatttatattgctgtatagtttcttaagcttaagattatagtgacaatattcaccataaaaa  24932900
                 <------ZmHOX2a(2)
                --------->ARR11(3)
           <------MYB46(1)                                                                       ---
           <------MYB83                 <---------At4g35610                  <---------AHL20(2)  ---
        <---------MYB52(1)             ------->TEIL             --------------->AGL15            <--
------->TOE2(3) <---------ARR11(3)   <-------TEIL  ---------->DOF2          --------->AHL20(2)------
-------->GT1 <--------P             --------->AtLEC2            <---------------AGL15      ---------
 
atgttaaatccatttggtagatcatatttagtcaataacatgcatcttccatcccaaaggaggtttactagttcgagtatttaatagcttaaaacattaa  24933000
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AGI:  At1g66810.1   
Description:  zinc finger (CCCH-type) family protein. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT1G68200.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42208.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)
Range:  from: 24931276    to: 24932466    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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