Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->YAB1   <-----------HVH21 ------->ANAC46 --------ALFIN1 ------>ZAT14 -------ZAT14                                 --------->LBD16 ----->AtMYB61         <---------ARR11(3)    --------->ANAC55(2) ------ALFIN1      --------->YAB1            <---------ANAC55(2)                      <---------MYB52(1) ---->ANAC46      <---------YAB1             ----------->GT1                         <-------GAMYB -->ANAC46      --------->GLK1(1)            <---------ANAC46                       <---------ANAC46 ->ZAT14        <---------GLK1(1)           <---------LBD16                         <---------ANAC58 --ZAT18       --------->ARR14(2)    <---------ALFIN1                   ---------->DOF2         <---- --ZAT14       <---------ARR14(2)   <---------ZAT14                 <---------HSFB2a(2)         ----- ->ZAT18     --------->LBD16        --------->ZAT14                ------>ZmHOX2a(2)<---------ANAC58 --->AtSPL8<---------LBD16          --------->LBD16     --------->TOE2(3)        <---------MYB52(1) ----AtSPL8--------->LBD16        <---------LBD16       --------->TOE1(3)--------->DAG2        ------   cacacagtcataccgcggatatcataatcttcaatctccgcacagtcccgtaaaaaaaccctaatttgatcgcgaaaagctccgttccgttgtatcggaa  24644800                                                           <-------MYC3                                                           ------->MYC3                                                          --------->ANAC58                                                          =================================bZIP_DOF                                                          --------->O2            <---------ARR11(1)                            --------->ANAC55(2)            --------->ARR14(2)                            <---------ANAC55(2)           <---------GLK1(2)                              --------->ANAC58         --------->LBD16                             --------->ANAC58         --------->ANAC46                  <---------MYB52(1)      --------->ATHB12        --------->HSFB2a(2)              <---------ANAC58 <---------O2        --------->LBD16              <---------ANAC58--------->ANAC46       <---------LBD16               <---------ANAC58--------->ANAC58<---------WOX13(1) -----GLK1(1)                  =====================================bZIP_DOF ---->GLK1(1)                  <----------DOF2      --------->SPL7<---------YAB1            <-------- --->ARR14(2)           ----------->GT1  <---------ANAC58 --------->TGA1a       <----------DOF2   <--   acccatcttccccgaatcgttgtagattgtaaacttttggcttccgttttctcttacgacacgtttcgatgattgggactggcatttttgagtgatgata  24644900                                                                                     --------->At4g35610                                         <---------At4g35610                       --------->MYB46(3)     <----------DOF2               --------->ARR11(3)                            <-----------GT1 <---------ZAT18                 <---------TOE2(3)                               -------->P --------->ZAT18         <---------TOE1(3)                    >>>>>>>>>TBF1     <-----------GT1    <- -YAB1  <---------YAB1   <---------TOE2(3)         <----------ID1          <------ZmHOX2a(1)  <------ -------ZAT6        <----------DOF2<---------ARR11(3)      >>>>>>>>>TBF1 <---------TOE2(3)    <------   gagttcgcttttgattctgagacttttagggttttgagattttagcttcgatggagacgaagaagaagaagctctgaggaatttacccgctcaaatgcgt  24645000                                                                   <-------GAMYB                                                                  <---------MYB46(3)                                                                  ----------->GT1                   -                                                                <-------GAMYB                      <-                                                          ------>ZmHOX2a(2)                       <--                                                         --------->CCA1(2)                        <--                                                         <---------At4g35610                      ---                                                         --------->At4g35610                      ---                                                         <------ZmHOX2a(2)                        <--                                                        --------->AGP1                            <--                                        --------->ANAC58<---------ARR14(2)                       <---                                        --------->ANAC58<---------AGP1                       <-------                                        <---------ANAC55(2) --------->MYB52(1)             <-------GAMYB                                        --------->ANAC46--------->ARR11(3)             --------->MYB52(1)                                        --------->ANAC55(2)----------->HVH21          ----------->HVH21         <---------HSFB2a(2)     <---------YAB1         --------->ARR14(2)           ------>ZmHOX2a(2)         --------->HSFB2a(2)   <---------ICU4           <---------ARR11(3)          --------->At4g35610      <---------ZAT6          --------->ICU4           --------->GLK1(1)            <---------At4g35610 --------ANAC46               <---------YAB1           <---------GLK1(1)           --------->ARR11(3) ---ANAC58                 --------->ICU4             ----------->ARR10       <-------TEIL<---------MYB46(3) ---ANAC58                 <---------YAB1    <---------WOX13(1)<---------MYB46(3)  <---------ARR11(3)   tttgtgtagttttagaaatacccttggtgttgattattatctacgtaattgccactgagatctgacggttgttaattgagttcatgatctgacggttgta  24645100                                                            <------ZmHOX2a(2)                                                          --------->At4g35610                                                         *TSS          <---------CCA1(2)                            <---------At4g35610        <---------MYB52(1)                            ----------->RAV1(1)      <---------ANAC46                               <---------WRKY38(1)     ---------->ID1                                  <---------WRKY12 <----------DOF2                                     <---------ETT(2) ----->ZmHOX2a(2)                                  <--------ZAP1 -----ZmHOX2a(2)                                   <-----------HVH21 ---------ARR10                               ------->GAMYB --------->ZAT14    <---------AHL20(2) -------AGP1                                 --------->MYB46(3)              <---------AHL20(2) ------>ARR14(2)                          <---------WRKY38(1)               <---------ARR11(3) ------>ARR11(3)                     ---------->DOF2 --------->ETT(2)       --------->ARR11(3) -------ARR11(3)               <---------MYB52(1) <---------DEAR3(2)        <---------AHL20(1) -------ARR14(2)             <---------MYB46(3)   <------MYB46(1)   <---------MYB52(1) ------CCA1(2)        ------->GAMYB <---------WRKY45--------->WRKY18(1)<---------ANAC46 --MYB46(3) <---------YAB1------------>MYB.PH3(2) <------MYB83     <-------GAMYB   <-----------GT1 <-   gatctttgccgtttatctttgtaaccgaagtttgttagtcaaagtcaacagtcggtcaacagatcactctgttgagtatatatttttacaaacctttcta  24645200                                                                        --------->ALFIN1                                                                      <---------ANAC46                                                                   <---------AHL20(2)                                                               <---------AHL20(2)    ----------->GT1                                                               --------->AHL20(2)    <------MYB83                                       <---------YAB1     <---------AHL20(2)         <------MYB46(1)                <-----------GT1  <---------YAB1           --------->AHL20(2)        <---------MYB46(3)           <---------YAB1      <---------AHL20(2)         <---------AHL20(1)  --------->CCA1(2)  ---------->DOF2           <---------ICU4                --------->AHL20(1) --------->ARR11(3) --------AHL20(2)      --------->AHL20(2)                --------->AHL20(2)  <---------ARR11(3)   ttttaaaagctctattattcacatttttaatatttattcttgtgaatgaagagttcgaattttatttatattatgtggagatatagttggtgattttgcg  24645300                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <---------CCA1(2)                                                                 <---------ANAC58                                                                 <---------ANAC46                                                         <---------ANAC46                                                        <---------AtMYB61                                                        --------->ALFIN1                                        <---------ARR11(3)       <---------ANAC58  ---------->ID1                                    ---------->DOF2    --------->ZAT14   --------->YAB1         <-----------HVH21    --------->ARR11(3)       <---------ZAT14  <-------TEIL <----------DOF2        <----------DOF2 --------->ARR11(3) <---------ANAC46 --------->AHL20(2)   aagctttaatatgtcatcggtgttaactttaagttattgaaagaacttagatgttagtgtggtgttttcgtatattcataaatttgttttttttttgttt  24645400                           --------->AHL20(2)                       --------->ICU4                     --------->AHL20(2)                     --------->YAB1                <---------AHL20(2)                --------->AHL20(2)       --------->HSFB2a(2) <---------AHL20(2)                   ---------->DOF2       <---------HSFB2a(2)--------->AHL20(2)              --------->TOE2(3) <-----------RAV1(1)<---------AHL20(2)                    <---------DAG2      <---------AHL20(2)    <   tttatggtgctggaaattttaaataatatttaattcagtgggaaagtttcaaaaatacaaccttttaaaagcactattgttttattctctattttcaaaa  24645500                                                                                               ------                                                                                               ------                                            --------->AHL20(2)                                 <-----                                           <---------AHL20(1)                                  <-----                                           <---------ARR11(3)                                  ------                                     <---------YAB1---------->DOF2                            <------                                ----------->GT1 --------->YAB1              --------->AHL20(2)-------      <---------ARR14(2)  ---------->DOF2  --------->AHL20(1)        <-----------GT1        --------- ----------ID1         --------->TOE2(3)   --------->ARR11(3)  ----------->GT1      <----------DOF2   ataccacaaatatggatttataaattcttaaagcatgttataaaaaatatttataaagttttatatggtttttagcattttaaaaacttttcagtaatta  24645600                                                                                             <-------                                                                                            <--------                                                                                         <---------YAB1                                                                                       <---------CCA1(1)                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3) ---------->ID1                                                                      <<<<<<<<<RAP2.2 --->ATHB12                                                                    <---------AHL20(1) --->ATHB51                                                 --------->AHL20(2) --------->AHL20(2) ----ICU4                                                  <---------YAB1      --------->AHL20(1) ----AHL20(2)                                             --------->AHL20(1) --------->AHL20(1) --->AHL20(2)                                             --------->AHL20(2) <---------ARR11(3)  ---- ---YAB1              --------->ICU4                     <---------ICU4      <---------AHL20(1)  ---- -->ICU4    --------->AHL20(1)                     ----------->GT1           --------->ARR11(3)  ---- >YAB1 --------->AHL20(2)     <---------YAB1      ----------->GT1           --------->YAB1--------->YAB1   tttgttgtataaaatatactagtattgattttgttatagactaaatttgaatgtgttaaatattatataccaatacaaaaatattttagatattataaca  24645700  Previous    Next  AGI:  At1g66170.1    Description:  MMD1 (MALE MEIOCYTE DEATH 1); DNA binding. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT2G01810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73422.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 24642348    to: 24645157    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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