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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                             ----------->GT1
                                                                            ----------->GT1   <-----
           ---------->DOF2                                               <------ZmHOX2a(1)    ------
          --------->AHL20(2)                                     <------ZmHOX2a(1)        --------->At5g28300
          <---------AHL20(2)                                   --------->MYB59           -----------
      <---------AHL20(2)                                 --------------->AGL15         --------->At4g35610
   --------->YAB1                    --------->ARR11(3)  <---------------AGL15         <---------At4g35610
  <---------YAB1--------->GLK1(1)    <---------ARR11(3) <-----------------AGL1      ---------->DOF2
--TEIL--------->AHL20(2)           <---------HSFC1(2)   <-----------------AGL3      <---------At5g28300
>YAB1<---------YAB1                --------->HSFC1(2)   <-----------------AGL2     <-----------GT1--
 
atttcattataaattaaagagttccagtgagtcttggaaacatcttctcccttaccatgactaaattaggaacagaggaagggtaattacagcagtaaca  23555300
                                   ----------->GT1
           <---------At5g28300   --------->ZAT14
          <-----------GT1        --------->REM1(2)
   ----------->GT1         >>>>>>>>>>>>>>>>>LFY
   <---------YAB1          --------->MYB52(1)
--------->ICU4     --------->At4g35610
----MYB52(2)       <---------At4g35610    ----------->HVH21                     ---------->DOF2
--->MYB46(3)     <-----------RAV1(2)     <---------WOX13(1)                ----------->RAV1(1)
>GT1   <---------ICU4----------->HVH21<---------AHL20(2)               ------------------------>ANAC81
------->YAB1   <-----------HVH21 <---------ZAT14----------->GT1  ------>ZmHOX2a(1)
 
aacatgatgaaaattacagttcaggtgacataccagtgtagataattgacagagtaaaaacaatggtcctcaaaatgccaacaaaaagaagagaagagca  23555400
                                                             ------>ZmHOX2a(2)
                                                            <------ZmHOX2a(2)
                                                           <---------GLK1(2)
                                                           --------->ARR14(2)
                                                           <---------ARR11(3)
                   --------->At5g28300                     <---------ARR14(2)
                  ----------->GT1                          --------->ARR11(3)                      -
            --------->ANAC58                             ----------->ARR10                        <x
            --------->ANAC46                   <---------ANAC46                             --------
            --------->ANAC58                   <---------ANAC58                            <--------
    --------->CCA1(2)          <---------TOE2(3) ----------->HVH21                         <--------
   --------->ARR11(3)       <---------YAB1     ----------->RAV1(2)                      --------->GLK1(2)
   <---------ARR11(3)  --------->ZAT6          <---------ANAC58------>ZmHOX2a(1)     <---------TOE2(3)
 
ttccaagatatagccaaggcactgtaacaccattaatgttatgtcgaatggcctgaagcatagatcctttcaacttaggcatgttattgagattccaggg  23555500
                              --------->At4g35610
                              <---------At4g35610            <------ZmHOX2a(1)                     <
                          --------->TOE2(3)               <---------LBD16                        <--
     --------->ZAT14<---------ARR14(2)                    --------->HSFB2a(2)              ---------
 --------->TOE2(3)  --------->ARR14(2)                <---------ARR14(2)                   ---------
------->P           <---------ARR11(3)                --------->ARR14(2)  --------->LBD16  ---------
xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   ----------------->AGL1<---------ANAC55(2)  <-----
->LBD16             --------->ARR11(3)       <---------AtMYB61     --------->AtMYB61       ---------
---RAV1(2)         <---------CCA1(2)       <----------DOF2<---------HSFB2a(2)       <---------HSFC1(2)
-LBD16           <---------CCA1(2)<---------GLK1(2)<------NtERF2  --------->MYB46(3)--------->HSFC1(2)
 
gctaccacaatactcatcccatatatctgcctcaactgattctggtctttggtcgcctattcgaggaaaaccactcccgtaaacagaagtatccaagtca  23555600
                                                                                               <----
     <---------MYB59                                                                           <----
    --------->YAB1                                                                            *TSS
    --------->ANAC46     ----------->HVH21                                                 ---------
    --------->ANAC55(2) <---------MYB111(1)                          ------>ZmHOX2a(1)   --------->ANAC46
---------YAB1          --------->At4g35610                           --------->HSFB2a(2) ------>MYB83
---------GT1           ----------->RAV1(2)                      <---------ANAC58       --------->AtMYB61
>ANAC58                --------->ZAT2                      <---------ARR14(2)          <---------MYB59
>ANAC46                --------->O2                        --------->ARR14(2)     ------>ZmHOX2a(1)
>ANAC58              <---------ALFIN1                  <-----------GT1            ==================
----ICU4            --------->MYB46(3)            <---------DAG2<---------ANAC58----------->RAV1(2)<
>bZIP60(2)      --------->AtMYB61                 <----------DOF2    <---------HSFB2a(2) ------>MYB46(1)
 
ttaccatacataacttcaacctcaccacctgacccttctactatctcccaaaactttttctctatctgcgtcctagacactgttcctgaaccaaaccact  23555700
                                        --------->YAB1
                                       --------->ICU4
                                  --------->ANAC58
-----DAG2                         --------->ANAC55(2)                                         ------
------DOF2   ------------>CBF     --------->ANAC58       ---------->DOF2                      ------
>MYB46(3) <------ZmHOX2a(2)--------->ARR11(3)       --------->AtLEC2                      --------->ANAC58
=================HOX2a_HOX2a      --------->ANAC46 --------->ANAC46                       --------->ANAC58
----------DOF2             <---------ARR11(3)  <-----------GT1  ---------->DOF2           --------->ANAC46
 
ttcttttggctcgatcagcaattcgcttaaaatcttcaagtaataagcatttaccaggcacaaagccaaaagtctcttcatcagtgtttaaacactcaag  23555800
                   <----------TaMYB80
                   --------->CCA1(2)
                   <---------GLK1(1)
                   --------->GLK1(1)
                  --------->ARR14(2)                         <---------ICU4
                  <---------ARR14(2)                       <----------DOF2                  <-------
                  ---------->TaMYB80                      --------->TOE2(3)               --------->ZAT14
              --------->ALFIN1    <------NtERF2         ------>MYB46(1)               <---------ALFIN1
            --------->TGA1a      ------>NtERF2<---------ARR11(3)                 --------->ANAC58
            --------->O2        <---------DEAR3(1)      ------>MYB83             --------->ANAC58
            <---------O2        --------->ALFIN1        -------->P           --------->ANAC46
--->ANAC58  <---------TGA1a   ------->GAMYB   --------->AHL20(1)       <-----------HVH21  <---------ZAT14
--->ANAC58  ==========================MYC_MYB <---------AHL20(1)<-----------GT1---------->DOF2
 
gcaataccagttcccaagtgggatatgcttcaacggtggcgatagacaatatatatgccaacctttattacaactatcacacaaaagcatcacttcaccg  23555900
                                -------->P                                                         -
      <----------DOF2 --------->ANAC46                                                        <-----
      <---------DAG2  --------->ANAC58                          <-----------GT1               <-----
  ---------->ID1      --------->ANAC58                        <-----------GT1 <----------DOF2 ------
--At5g28300         <---------ALFIN1             <---------ALFIN1 --------->ANAC46            <-----
 
tgtttgtcacttttacattgctcacacgcttgatcaaccccttcttcattttccaccttgggatttttcacatcagcatttctttttcttctcttcgagc  23556000
    <-------TEIL                                                                  <---------HSFB2a(2)
   --------->GLK1(2)                                  ------->TEIL                --------->HSFB2a(2)
-------->LBD16                                     --------->ANAC58               <---------HSFC1(1)
----At4g35610                                      --------->ANAC58         <---------YAB1 ---------
----ZAT2                                        ----------->HVH21        <---------YAB1    ---------
--->ZAT2                                      <----------DOF2 <-------TEIL--------->YAB1   ---------
----GLK1(1)                        <----------DOF2 --------->ANAC46    --------->YAB1   <---------ATHB12
 
tccgagattcagaacatcgtcgaatgccattaatcttccttttgcaactctttgacgcatctacattcatccgattatgataattctcgaaatcatgcaa  23556100
                                                                                        <-----------GT1
                                                                                        ---------->ID1
                                                                                       <-----------GT1
                                                                              --------->ANAC58
                                                                              --------->ANAC58
                   --------->ANAC58       --------->ARR11(3)                  --------->ANAC46
  <----------DOF2  --------->ANAC58       <---------ARR11(3)              <-----------HVH21
>ANAC58            --------->ANAC46 <----------DOF2         ----------------------->TaNAC69(2)
>AtLEC2     ------->GAMYB        <---------ALFIN1       <---------At4g35610--------->ZAT14    ------
>ANAC58     ----------->HVH21   <---------ZAT18  <-----------GT1         --------->ANAC46   <-------
 
atgctctttgtataactgacacaagacatgtttcgcacactttgaaatcttttcaccagagctcataaactgatacacttcaccccattttttccctttg  23556200
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AGI:  At1g63490.1   
Description:  transcription factor jumonji (jmjC) domain-containing protein. similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G20400.2); similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G08620.1); similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G20400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62816.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); cont
Range:  from: 23548321    to: 23555695    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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