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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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      ------>ZmHOX2a(2)
    <---------ARR11(3)
    --------->ARR11(3)                                                  <----------DOF2
---------ANAC46                                                      <-----------GT1
----bZIP60(2)               <<<<<<<<<TBF1                           <---------CCA1(2)
-->HVH21             <-----------GT1                            <---------ANAC46
>DEAR3(1)         ----------->GT1       ------>ZmHOX2a(1)      ---------->ID1<----------DOF2
 
ttgccttgatcttagaacacagtgtaacttcttcttcccattcctcatcttcatcaacttctacttgtcgtttatctttccttttactactaacatcaga  23042600
                        <---------At4g35610
                        <---------ANAC55(2)
                        --------->ANAC55(2)
                   --------->YAB1
                   <---------ICU4        --------->TOE2(3)                                       ---
                  --------->ICU4         --------->TOE1(3)                                       ---
                  <---------ATHB12       --------->YAB1                     ------>ZmHOX2a(1)   ----
              <---------ZAT18      --------->YAB1                           <----------DOF2---------
      --------->ANAC55(2) ----------->HVH21                            --------->WOX13(1)  ------>ZmHOX2a(1)
     -------->P --------->WOX13(1) --------->TOE2(3)                 <---------YAB1        ---------
   <---------MYB111(1)  --------->At4g35610                    <---------ANAC46            <--------
   <---------MYB111(2)  ----------->RAV1(2)                 <---------MYB52(1)     <---------TOE1(2)
 
aaaccacttacctattgtgcaatcatcacctgactctatcttaaccataacttcaacttcttcgttgcgcttatcaatccttttcgcagtattcctctga  23042700
                                                             <---------TOE1(2)
     <---------ANAC55(2)                          <---------ARR11(1)
     --------->ANAC55(2)                          <---------ARR11(3)
  <---------ATHB12                                --------->ARR11(3)               --------->At4g35610
--------->WOX13(1)            --------->YAB1      --------->ARR14(2)               <---------At4g35610
------>ANAC58              --------->YAB1         <-----------ARR10              --------->MYB46(3)
------>ANAC58     --------->YAB1                  <---------ARR14(2)            <---------At5g28300
--->TEIL          <---------ICU4                 <---------GLK1(1)        <---------ANAC58
>At4g35610       <---------ATHB12                <---------CCA1(2)        <---------ANAC46<---------ICU4
-->RAV1(2)       --------->ICU4                <---------AtLEC2           <---------ANAC58--------->YAB1
-At4g35610     --------->WOX13(1)          <----------DOF2  ------>ZmHOX2a(1)  <-----------GT1
 
acccaatcacttaatatgcaatcatcatcttcataatattcttctactttgcatatctttctccttcgtttcgcattccgtttaaccgctgaatcatcgc  23042800
                      --------->ARR14(2)
                     <---------MYB52(1)
                   <---------ANAC58
              --------->HSFC1(2)
              <---------HSFB2a(1)
              --------->HSFB2a(1)
              <---------HSFC1(2)
           ---------->DOF2
        --------->HSFB2a(2)
        <---------HSFB2a(2)
    --------->At4g35610         --------->ZAT6                    --------->ATHB12
    <---------At4g35610   ------>ZmHOX2a(1)             <---------DAG2                      ------>ZmHOX2a(1)
    --------->ZAT2 <---------ANAC58                  <<<<<<<ZML2 <---------YAB1--------->GLK1(1)
 
tatcttcagctctcgaaagcttccgtttcctactatcactactactactagggctagaaccttttgacatgaatggtttcagagttctcttcttcctagt  23042900
                                                        --------->GLK1(2)
                                                        --------->ARR14(2)
                 <---------YAB1                         <---------ARR14(2)
                <---------ARR11(3)                     <---------GLK1(2) ------>ZmHOX2a(1)
                --------->ARR11(3)                   --------->LBD16   ----------->RAV1(2)
          --------->YAB1                       <-----------GT1      <---------At4g35610         ----
  --------->ANAC46--------->ATHB12           --------->AHL20(2) <----------DOF2   ---------->DOF2
 
cgtccacgaatattgataagataattggaaacaattcatatgctccaatttaactccagaatccattctttagctcctgcaaacaaaaatcgccagtgat  23043000
                   <---------ARR14(2)
                   --------->ARR14(2)
        ------>ZmHOX2a(2)
       <------ZmHOX2a(2)
      <---------AGP1
      --------->AGP1--------->GLK1(2)
      --------->ARR11(3)                                          >>>>>>>>>RAP2.2
      --------->ARR14(2)                                <---------ARR14(2)
      <---------ARR14(2)         <------------CBF       --------->ARR14(2)
      <---------ARR11(3)    --------->ANAC46       --------->AtLEC2                                <
     <---------CCA1(2)    --------->REM1(1)     ------->TEIL    --------->ARR11(3)         ---------
------->GT1        <---------GLK1(2)       --------->MYB52(1)   <---------ARR11(3)         <--------
 
ggtaattcagatctatgaaacagattcttacaccaaaattgaaacaaaacgaacatgcagatttgaatatctaaaacagagacaacaaattcgagttctt  23043100
            --------->AHL20(2)                                                         ---------->DOF2
      --------->YAB1                                                          ------>MYB83
   <---------ICU4                                  --------->YAB1    <---------YAB1  --------->YAB1
  <---------YAB1      --------->AHL20(2)      ------------>CBF   --------->TOE2(3)  <---------ATHB12
  --------->ICU4      ---------->DOF2   <---------ATHB12      ----------->RAV1(1) --------->WOX13(1)
--------->YAB1   ------------>CBF     --------->WOX13(1)   ------>MYB46(1)    ------>MYB46(1)
------ZmHOX2a(2)--------->YAB1      ------------>CBF       ------>MYB83<---------AHL20(2)    -------
>ARR11(3)   <---------AHL20(2)<---------ARR14(2)  <---------ATHB12<---------YAB1<---------ATHB12
-ARR11(3)  --------->AHL20(2) --------->ARR14(2)--------->WOX13(1)--------->ICU4------------>CBF<---
 
cgatcataatcaaaattaatcgcaataaaacagtatatgatcaatcgattccaatcaaaaccaaacaacattattaaaaccaaatcaatcaaaagagaca  23043200
                   --------->At4g35610
                 --------->YAB1
        <------------CBF                          --------->YAB1
    <---------HSFB2a(2)                          <---------YAB1
    =========================================================MADS_MADS
    <---------------AGL15                    --------------->AGL15
    --------->HSFB2a(2)    <------ZmHOX2a(2) --------->TOE2(3)                        <---------GLK1(1)
   ----------------->AGL2 <---------ARR11(3) <---------DAG2                          <---------ARR11(3)
   <-----------------AGL1 --------->ARR11(3) <---------------AGL15          --------->ANAC58
----->CBF     <---------GLK1(1)           <-----------GT1                   --------->ANAC58   -----
---------CBF  --------->GLK1(1)    ------------>CBF              ----------->GT1     --------->ARR11(3)
 
attgagtctagaattggaaatcagaagaagatcgaaaactcaattttaccttatgatgaacacaaacacagaaaaaaacaagctcgaagaactctgcaac  23043300
                                                     ---------->DOF2
                                                 --------->At4g35610
                                        <---------ZAT2                                     <--------
       ------>ZmHOX2a(1)                --------->At4g35610                                <--------
     ----------->RAV1(2)                <---------At4g35610                <---------GLK1(2)<-------
 ------->TEIL                           --------->ZAT2                     --------->ARR14(2)
---->ICU4                 <-----------GT1        <---------At4g35610       <---------ARR14(2)    <--
 
gatgaatctcctgtgaaaaacaaatctataaaccctagattccagctaagttagatgaaagagattgaacaaactttggattctctcaaacttagctttc  23043400
                                                                   ---------->DOF2
                                                                 <------ZmHOX2a(1)
                                                               --------->MYB59
                                                        <---------HSFB2a(2)
                                                        --------------->AGL15
                         ---------->DOF2                --------->HSFB2a(2)                   ------
                    ----------->GT1                     <---------------AGL15           ----------->GT1
                   <---------TOE2(3)                   <---------LBD16                 <---------ANAC55(2)
                   ----------->GT1                     ----------------->AGL2  <---------ANAC58
                 ---------->DOF2                    --------->ARR11(3)         <---------ANAC58
      --------->YAB1<----------ID1                  <---------ARR11(3)----------->GT1  --------->ANAC58
-ANAC58     ============================================================MADS_MADS      --------->ANAC58
-ANAC58     <---------------AGL15                  --------->CCA1(1) ----------->GT1   --------->ANAC46
---DOF2  --------->MYB52(1)               <---------LBD16--------->LBD16     --------->ARR11(3) <---
--------DOF2--------------->AGL15  ----------->GT1 --------->RVE1(1)--------->DAG2    <---------LBD16
 
ctttttatttcataactgaataaaggaaaaaagagaaatagtttattcggagaaatatcccagaattaggaaaaggaaaatttcttgagcacggaaaaaa  23043500
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AGI:  At1g62310.1   
Description:  transcription factor jumonji (jmjC) domain-containing protein. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G11950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44407.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60121.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)
Range:  from: 23039704    to: 23042966    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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