Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------ANAC55(1)                                                                                       --------->ANAC55(2)                                                                                       --------->ANAC55(1)                                   <---------ANAC46                                    <---------ANAC55(2)                            --------->CCA1(2)                               --------->ANAC46                           <---------ARR11(3)                              <---------LBD16                           <---------ARR14(2)                             ----------------------->TaNAC69(2)                           --------->ARR14(2)                            <---------ARR14(2)                    --------->TOE1(3)    --------->ANAC58              <---------HSFC1(2)          <-        <---------At4g35610--------->ARR11(3)                          --------->HSFC1(2) ------->TEIL    <-----------HVH21      --------->ARR11(1)          ------>ZmHOX2a(1) --------->ARR14(2)       --- ----->DOF2         --------->TOE2(3)    --------->ANAC58    --------->ALFIN1--------->LBD16  -------   aagataagtcagacgattgaaaccttgaagatatgtggtttgaacgaaaacgaagtccttcaagtgttgaagaagtatccgcatttcatacgtattttgt  22919000                                                        --------->YAB1                                                        -------->ATHB1                                                        <--------HAHB4                                                        --------->ATHB51                                                        <---------ICU4                               --------->WRKY12        <---------ATHB51                  --------->MYB52(2)                   <---------YAB1 --------YAB1     <---------MYB46(3)         <----------DOF2<-----------GT1 ------>AHL20(2) <---------TOE1(2)     <---------TOE2(3)--------->AHL20(2)     <-----------GT1 ---->GT1       <---------MYB52(1) <----------DOF2     --------->ICU4          --------->YAB1       -   taaaattgcatcatcttcgtttgtttcattccattgactttaatgttcttttgaacaattattaactatgtgttttgctatttatcatctaatatagatg  22919100                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                        <------ZmHOX2a(1)               --------->ICU4             --------->TOE2(3)        <---------TOE2(3)             <-----------HVH21        <-------         <---------AHL20(2)     --------->ATHB51                 ----------->RAV1(2)      --------->ICU4 -------->ICU4                  <---------ICU4 <---------WRKY18(1) ------>ZmHOX2a(1)      --------->GLK1(2)   tcatgttttatattatctcaattgttcatgtccataattttaggaagtttgactgtttgagtgatgctcctgtcattagcatcactcaagagattatgaa  22919200                                                                                                   --                                                                                                  ---                                                                                             --------                                                                                            ---------                                                                 ---------->DOF2          --------->YAB1                                                           <------MYB46(1)                --------->MYB52(1)                                                           <------MYB83                   <---------ICU4                                                          <---------MYB46(3)             <---------ATHB51                                                        <---------MYB52(1)               <---------AHL20(2)                                     >>>>>>>>>ARR2     <-------GAMYB                    --------->AHL20(1)                                    --------->ATHB12  <---------MYB46(3)               --------->YAB1 --YAB1    <---------YAB1          <---------YAB1 ----------->HVH21             <---------ZAT18   <--   ttctctccaaattttgatttttgtgaatgtccaaattttgattgtagtacatgtgaccgttgggttagaaagttggaaacaatgcacaaaaataatggtt  22919300                                                                              <---------CCA1(2)                       <---------AHL20(2)                                 --------->GLK1(2)         -    ------->TEIL      <---------AHL20(2)                                  <---------ARR11(3)        < ------->YAB1         --------->AHL20(2)      ---------->DOF2            --------->RVE1(1)<---------- ------>ICU4       --------->WOX13(1)    ---------->ID1--------->HSFB2a(2)--------->ARR11(3)        < --->GT1  --------->DAG2  ------------>CBF  ------>ZmHOX2a(1)      --------->TOE1(3)   ============== >ICU4   ---------->DOF2  <---------ATHB12 --------->TOE2(3)       --------->TOE2(3)   ------>ZmHOX2a(1) -------YAB1     ------------>CBF <---------AHL20(2)   <---------HSFB2a(2)<-----------ARR10    <-----   ataatgaaccaaaaagtaaaccaattaaatcaatatttgatttgtccttaaaccggtccagaactaaaaccctaaaaatcttatctttcctctccgatat  22919400          *TSS         --------->At5g28300        ----------->GT1      <---------ZAT14      <---------ZAT18                      <---------ANAC58      --------->ZAT14                      <---------ANAC46                       --------->ANAC58  ------>ZmHOX2a(2)                        <---------ANAC58                 <---------LBD16 -------->ARR14(2)                      <---------MYB52(1)              --------->ARR14(2) ---------ARR14(2)           <---------ANAC55(1)                        --------->GLK1(2) -------AGL1                 <---------ANAC58                           <---------ARR14(2) ---------AGP1               <---------ANAC46         ----------->GT1   <-----------ARR10 ========HOX2a_HOX2a         <---------ANAC58       ---------->DOF2    <---------GLK1(2) -------CBF     <-----------GT1      <---------------------WRI1 --------->GLK1(2) --------->ANAC58   tggatctgtgcagtaattttactaatcgatttcgtgttcttcgttgcttagtaagaaagtagaaagtttctgagaatctcgggcacgaattgaatcagat  22919500                                                                                  <---------ANAC46                                                                                  --------->MYB52(2)                                                                                 <-------TEIL                                                                              --------->HSFB2a(1)                                                                              <---------HSFC1(2)                                                                              <---------HSFB2a(1)                                                                              --------->HSFC1(2)                     <----------DOF2                                     --------->HSFB2a(2)                 <---------TOE2(3)                                       <---------HSFB2a(2)                <-----------GT1                                     <---------At4g35610             <----------DOF2                                        <---------ZAT2<---------ANAC58           ----------->GT1                                          --------->ABI4(2)    <--------P        --------->GLK1(2)           <----------DOF2                --------->ALFIN1     <-------GAMYB       <---------GLK1(2)---------->DOF2                         <---------DEAR3(1)<---------ANAC58   aattcgctagaatcggtttaacgctttaaaggcaatcgctttgcattctcatgaattctcttatactcggtgctgctagaaggttcgtggggttgcattt  22919600                                                                            ----------------->AGL1                                                                     =====================bZIP_DOF              <----------DOF2                                        <---------TGA1a             <---------DAG2                                     --------->At4g35610          --------           ------->TEIL                                         <---------At4g35610     --------->ARR11(3)         --------->ZAT14                            <---------At4g35610   --------->ZAT18  <---------         <---------ZAT14                 <---------ARR14(2)  <---------At4g35610        <---------ARR11(3)         <---------ZAT18   ------->TEIL  --------->ARR14(2) <-----------RAV1(1)---------->DOF2      -   gagagtttcagtgaaccttttgcaaaatgaatctttctcttcgtattcgttctcttctgctagtgctgctgatgtgagccctaaaggggagacctttaaa  22919700                                                                        ------>ZmHOX2a(2)                                                                      <---------AGP1                                                                      <-----------ARR10                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)         <---------ANAC58                                            <---------CCA1(2)         --------->TOE2(3)                                         <---------HSFB2a(2)         <---------ANAC58                                          --------->HSFB2a(2)           <--- --------->TOE2(1)                                              <---------MYB52(1)         --------->ZAT18 --------->TOE1(1)         --------->At4g35610                <---------ANAC58             <-------TEIL ->AHL20(2)          <---------ANAC46                   <---------YAB1--------->ARR14(2)   <---------ZAT14 -DOF2------>ZmHOX2a(1)    <---------At4g35610       --------->GLK1(2)<---------ARR14(2)   --------->ZAT14 ----->ZmHOX2a(1)<---------At5g28300     ----------->HVH21    <---------ANAC58      --------->CCA1(2)   tcctcgtccttccttgattcactgcgtttagctacaaaactcactgacaagggaaattctgattccgttctggatcttctcagaagttatgggttcactg  22919800       ------>ZmHOX2a(2)       ======================HOX2a_HOX2a      --------->GLK1(1)      <------ZmHOX2a(2)      <---------GLK1(1)      =======================HOX2a_HOX2a     <---------ARR11(3)     --------->ARR14(2)     --------->ARR11(3)                           <------------ATHB5     --------->AGP1                               --------->YAB1     <---------AGP1                              <---------ATHB12                                 ---     <---------ARR14(2)                          --------->ICU4       ---------->DOF2           <----     --------->ARR14(3)               <---------ANAC58           <---------MYB46(3)       <---------ZAT14    <---------CCA1(2) <------ZmHOX2a(1)<---------YAB1          <---------MYB52(1)         --------->ZAT14 ------GLK1(2)     <-----------RAV1(2)<---------ANAC58----------->HVH21             <-----------GT1   attctcagatctccagcatcatcaggagtgattcaagagtgcttatagacaatgatgcgacatcccttggttcaaagcttcagtttttgcagtccagagg  22919900  Previous    Next  AGI:  At1g62010.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G62120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22919410    to: 22920995    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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