Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                          <---------ANAC58                                        <--                                          <---------ANAC58                                     <-----                                          <---------ANAC46                                   <-------                                         <-------TEIL                                     <---------ARR14(2)                                      <---------MYB46(3)                                  --------->ARR14(2)                                      <------MYB83                                      --------->LBD16 ----->ZAT6                           <---------DEAR3(2)                              <---------LBD16 ---->HVH21                           <------MYB46(1)          <-----------ARR10    <---------ARR14(2) -->ETT(2)        ------->TEIL      <---------MYB52(1) --------->AHL20(2)           ------->TEIL  --- --WOX13(1)<---------YAB1       <-------TEIL       --------->MYB46(3)               --------->ARR14(2)   cagtaaccagattacaaatgtactctggtatacatacagttggttcgtgatcaacaattgaatagtatctaaaccagaccaaaatgaatccggttctgct  22914500                                                      ------>MYB83                                                <---------ZAT18                                                --------->ZAT18                                            ------>ZmHOX2a(1)                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                --------->ICU4                                        --------->ARR11(3)                           <---------ANAC46     -------->HAHB4                     --------->ARR14(2)                           <---------ANAC58     --------->YAB1                     <---------ARR11(3)                       <------ZmHOX2a(1)     <---------ICU4                     <---------ARR14(2)        --------->ARR14(2) --------->ANAC55(2) >>>>>>>>>GT-1                          --------->AGP1------>MYB46(1)         <-----------RAV1(2) ----MYB46(1)                          --------->GLK1(1)          <---------ARR14(2) <---------ANAC58 ----MYB83                         --------->TOE1(2)  --------->MYB52(1)   ----------->HVH21 ----AtLEC2         <---------AHL20(2) <---------GLK1(1)          <---------ARR11(3)<------NtERF2 --YAB1            --------->AHL20(2) ----------->ARR10           --------->ARR11(3)<---------------- -------->GT1   <----------DOF2 <---------ARR14(2)  <---------MYB59      <---------At4g35610   tggttaataataccaagtcttttaaattgatgcagaacgtgagatcctagtgaaccaaactgaaacaatatctgaagatgacaggaggcgtaatgaggct  22914600                                --------->DAG2                               ---------->DOF2                      ------>ZmHOX2a(1)                     --------->TOE2(3)                    ----------------->AGL1                                                  ---------                 --------->KAN4(2)     ----------->HVH21                      --------->ANAC58            <---------TOE2(3)>>>>>>>>>GATA-1   <------MYB83                   --------->ANAC58    --- -------TaNAC69(2)  ----------------->AG       <------MYB46(1)    --------->REM1(1) --------->AHL20(2)   agagtatgcaatttgaggtcattcctaaatagataaagcaaatgacatttggtgaatgaagaagctctacaaccatatgttcgcaatttaaaacaaaccg  22914700                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        <---------AGP1                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        --------->ARR14(3)                          -                                                        <---------ARR14(3)                         --           ------>ZmHOX2a(2)              ------>ZmHOX2a(1)                                    <-----          <------ZmHOX2a(2)               ======================HOX2a_HOX2a                    ------         <---------ARR11(3)               =======================HOX2a_HOX2a          <---------ICU4-         --------->ARR11(3)     <----------DOF2         <---------ARR11(3)  <---------ANAC58  <------ >MYB52(1)<---------GLK1(1)    <---------DAG2  <---------DAG2    <----------DOF2   --------->YAB1 --- ------>GLK1(1)       <---------ZAT6<-----------GT1     --------->ARR11(3)  <---------ANAC58  <------   atatcgtttgagatctcagaaatagtgtgatcaccttttttctcctccaatttttgaagatctcaaactttgttttgggcttgaaacataatgtccatat  22914800                                            ----------->HVH21      --------->LBD16                     --------->At4g35610     <---------ANAC58                     <---------At4g35610     <---------ANAC58                     --------->ZAT2     <---------ANAC46                     <---------ZAT2 ---------->RAV1(2)                   --------->ANAC58                   <---------ICU4 ---->NtERF2                          --------->ANAC58                   --------->ATHB12 ----ARR14(2)                     <-----------HVH21                      --------->ATHB51 --->ARR14(2)                    ----------->HVH21                      --------->ICU4 -------->ATERF1(1)            <---------ANAC58   <----------DOF2       <---------YAB1 ---GLK1(1)                    <---------ANAC58 --------------->AGL15 *TSS                       ---- ------>ANAC46           <-----------HVH21----------->RAV1(2)  ---------->DOF2          <---------TOE1(3) ---CCA1(2)            <------NtERF2 >>>>>>>GRF7<---------------AGL15 --------->YAB1    <---------TOE2(3)   ccgcctgccgtgatactatatgggccgagtcaggcctgtcaggcacctgactcttttgagaaaaaaaaagaatcataattgaaattcttcaaggtttact  22914900                                                                          <---------ANAC58                                           <---------ANAC46  <-------TEIL <---------ANAC58          <---------ALFIN1                 <-----------------AGL1       --------->GLK1(2)        ----------->RAV1(1)      <----------DOF2           <---------ARR14(2)    <---------YAB1------  --------->ALFIN1 --------->TOE2(3) <---------TOE1(3)     --------->ARR14(2) <---------YAB1  <------ ----->MYB52(1)    --------->TOE1(3) <---------TOE2(3) <---------At4g35610<---------ANAC46    -------   atcggtggagcaacacataaaccctaaattttgggatttagggtttcgcgatttggaagcggattcatggtgagtttcttgttattgttcgtaattccag  22915000                                                                    --------->ETT(1)                          --------->ZAT18                        <------MYB46(1)                          <---------LBD16--------->HSFC1(1)      <---------ANAC46                        <---------RAP2.3(3)                      <------MYB83<----------DOF2                     <---------YAB1      --------->HSFB2a(2)    --------->MYB59                  ---- --->LBD16         --------->YAB1        <---------HSFB2a(2)    <---------MYB46(3)     --------->ZAT14 ---HSFB2a(2)     <-------TEIL   <-------TEIL               <---------MYB46(3)         <---------ZAT14 -->HSFB2a(2) <---------YAB1--------->LBD16                 --------->MYB111(1)    <---------ALFIN1   agaaattttggtatctatgattcatgactgcgcgattcatcttctcgaattgaaacagagagtagttgggtcggaatagctttcaacactgtagcatttg  22915100                                              <------MYB46(1)                                              <------MYB83                <---------ANAC58                                             --------->MYB59              <---------ANAC46                                             <---------MYB46(3)           <---------ANAC58                                             <---------AtMYB61  <---------ANAC58                                          <---------HSFB2a(1)   <---------ANAC58              -------                                  --------->AtLEC2          --------->GLK1(1)               <-------TEIL       <----------DOF2          <---------AtLEC2           --------->ARR14(2)        --------->ZAT14 ------>ID1               <---------GLK1(2) <--------P     <---------ARR14(2)        <---------ZAT18   tagcattgtcttttgtaatgtattctctgattctccatggaagaaggttggtccaatcgcagaaatgcttgagtttgagtgtttcagtgcaaaatgcatt  22915200                                                                        <-----------GT1                                    <---------TGA1a                --------->ARR11(3)                                    =================================bZIP_DOF                               <---------At4g35610                 <---------ARR11(3)                               --------->At4g35610          --------->DAG2                            <---------At4g35610            --------->DAG2                           <    ---------->ID1          --------->At4g35610           ---------->DOF2                      ------ >TEIL             <---------At4g35610             <---------AtMYB61  <----------DOF2         <------   tgttttgtccaattccttctcttctgctagagctgctgatgtgagcattagagatggtcgaaaagggaagaactttacagtctcttacctcgttgattca  22915300                                                                                                    <                                                                                                    <                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                   <---------GLK1(2)           ------                                                                 <---------YAB1                <-----                                                               --------->YAB1                 <------                                                          --------->WRKY18(1)                <-------                                    ---------->DOF2      <-----------HVH21                   -------- ---------ANAC46  --------->At4g35610        <----------DOF2--------->WOX13(1)               -------- --->ATHB12     --------->ZAT18  --------->ANAC58  <------ZmHOX2a(1)                        <-------- -TEIL     ---------->DOF2       --------->ANAC58 <----------ID1 ------>ZmHOX2a(1)          ---------   ttgggtttatctaaaaagctcgctgaatccatctcaaggaaagttagctttgaggacaaggtcaatcctgattctgttctaagtctgtttagaagttacg  22915400  Previous    Next  AGI:  At1g61990.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68941.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22914870    to: 22916600    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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