Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->HVH21                                                                                     <---------WOX13(1)                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                                    <---------AtLEC2                                                                                    <---------ANAC58                                                                               <-----------RAV1(1)                                                                               <---------MYB46(3)                                                                             <-------GAMYB                           <---------ANAC58                                 <-----------RAV1(1)                           <---------ANAC46                              --------->GLK1(2)                           <---------ANAC58                            --------->HSFC1(2)                  <---------ANAC58                                     <---------HSFB2a(1) -------->GT1     <---------ANAC58                                     <---------HSFC1(2)           < ->AGL15      <----------DOF2              <---------AHL20(2)          --------->HSFB2a(1)         <-   cagaaaaatggataagctttgtttgccctgcgtttgagggtttcttaaattgttttggatgatgaaatgaagaagtttctgttgttgcttgacattaagt  22911300                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                      <---------ARR14(2)                                   --------->TOE1(3)                                  --------->ARR14(2)                                   --------->TOE2(3)                                 --------->ZAT2                                 ------>MYB46(1)                                     --------->At4g35610                                 ------>MYB83                                        <---------ZAT2                               --------->DEAR3(1)                     <-----------HVH21       -------       ----------->GT1        --------->MYB46(3)             --------->TOE2(3)       <---------At4g35610     <---------ANAC58         --------->DEAR3(2)        <---------MYB59   --------->ANAC58  ---------     <---------ANAC58     <---------MYB52(2)           --------->ANAC55(2)--------->ANAC46  <-------- <---------MYB52(1)       --------->MYB46(3)      <---------ARR11(3) <---------bZIP60(1)   <---------MYB52(1) -------GAMYB<----------DOF2--------->MYB52(1)<---------AtLEC2       --------->bZIP60(1)<---------LBD16 ----------RAV1(1)       XXXXXXXXXXXXXXXXXXXX>MIR169G* --------->ANAC46   --------->ANAC58--------->LBD16   tctgttgtcttgttactttggtgttctaacaaaccgaccttaactcgtgcatgatatacttaacttcaatgttgtcacgacaagtccagctccggttcct  22911400                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                         ------->GAMYB                   --------->ANAC58                   --------->ANAC46         --------->YAB1--------->ZAT14      ---------->DOF2--------->ANAC46 ------TOE1(2)     --------->ANAC58                                            --------->GLK1(2) ------TOE2(2)    --------->ZAT14                                              --------->ARR14(2) ----ANAC58       <---------ZAT18        <---------ZAT14                      <---------GLK1(2) ----ANAC46       <---------ZAT14  <---------ALFIN1               --------->YAB1 ----ANAC58     --------->ZAT14 ------->GAMYB                     --------->ATHB12         --------->YAB1 -->MYB52(2)  --------------->AtSPL8     --------->ZAT14          <---------ICU4          <---------ATHB12 >ARR14(2)    --------->ZAT6--------->ANAC46                     <---------ATHB12    ------>ZmHOX2a(1) -ARR14(2)  --------->MYB52(1)--------->ZAT14      --------->ICU4--------->ICU4<-----------ARR10   tggttattcaaagataactgtacacaacacacaacacacactcttcactagacataatttgtaagaaatcattactctaagaatctcctcaaatcaaaat  22911500                                              <---------ARR11(3)                                              <-----------ARR10                                              --------->GLK1(2)                                    <-                                              --------->ARR11(3)                                 ----                    --------->YAB1           --------->RVE1(1)     <-------TEIL                  <---  <----------DOF2------->TEIL          ----------->GT1           --------->YAB1            <---------   atgactttgctctgtgatgcatttatagtctttggaaaactcagtaaaaatcttcacatctctacaatattcatggaatttataaaacactctctttgta  22911600                                             <-----------GT1                          <---------ANAC46                                          --------->TOE2(3)                  ---------->DOF2                                          --------->TOE1(3)                 --------->AHL20(2)              ----------->ARR10      --------->At5g28300                    <---------AHL20(2)         --------->ALFIN1           ----------->GT1   <---------AHL20(2)<---------AHL20(1)       <---------O2               <---------ZAT2     --------->AHL20(2) <---------AHL20(2) --------REM1(1)                  --------->ZAT2--------->TOE1(3)       --------->AHL20(1) ----->At4g35610            --------->ARR14(2)  --------->TOE2(3)       --------->AHL20(2)     <----- ------At4g35610 <---------O2     --------->At4g35610<---------AHL20(2)--------->AHL20(2)   --------- -DOF2 --------->O2         <---------ARR14(2)  <---------DAG2 ---------->DOF2   <------ZmHOX2a(1)   gctgtagccaagtggtgagacctgggttcgaatcccagcagtaacattaaccttattaattttgttaaagagaataaattaaaggacgacgtataccaat  22911700          <---------TOE2(3)          *TSS     <---------ICU4                                                                                <-     --------->YAB1                                                                               ---     --------->ATHB12                                                                             <--    --------->ICU4                                                      --------->HSFB2a(2)  <------MYB46(1)    <---------ATHB12                               <XXXXXXXXXXXXXXXXXXXXXMIR2935             <------MYB83 -------CBF              <---------YAB1           <------ZmHOX2a(1)     --------->HSFC1(1)  <-------- --->CBF  <---------TOE1(3) <---------WOX13(1)  <---------TOE2(3)       <---------HSFB2a(2) ---------   tggcaaatcattagggtttatgaaattttgagtgattttcagagaagtttgaggatgactgtgtgattctacttctcgaattgaaatagatagttgggtc  22911800                                                                            <------NtERF2       --------->ARR14(2)                                                  <-----------HVH21      <---------GLK1(1)                                                   --------->bZIP60(1)      <---------CCA1(2)                                                   <---------ANAC58      --------->GLK1(1)                                                   --------->TGA2(1)     ---------->TaMYB80 <---------ANAC55(2)                      <---------HSFB2a(2) --------ICU4           --------->ANAC55(2)            <------MYB46(1)    <---------TGA2(1) ------>ICU4        <-----------HVH21      --------->AtLEC2      --------->HSFB2a(2)               -- -------YAB1     <---------At4g35610  --------->ANAC58 <------MYB83       <---------ANAC46       ---- -MYB46(3)       --------->At4g35610  --------->ANAC58<---------AtMYB61   <---------ANAC58    ------- >MYB59<---------ARR14(2)          <---------GLK1(2)  --------->MYB59     <---------bZIP60(1) <------   ataatcgcatatccttgtcttctgtcatgtattctctgattcgccatggaagaagtttggtcgagttacagaaatggcgtcatttgagagttttagtgca  22911900                                            <----------DOF2                                          --------->LBD16                                         <---------ANAC46    --------->ATERF1(1)                 <---------LBD16    <------NtERF2                    <---------At4g35610            --------->DAG2   <---------ATERF1(1)               <---------ZAT2                ---------->DOF2  <---------ANAC58                   --------->ZAT2          <------MYB46(1)  <---------ANAC58                   --------->At4g35610     <------MYB83 ------->DAG2                       <-----------RAV1(1)     <---------AtMYB61  <----------DOF2 ------>DOF2                      <---------At4g35610      <--------P--------->DAG2 -->ZAT18    ---------->ID1    <---------At4g35610       <---------ZAT6     <---------ARR11(3) ---ZAT18<----------DOF2    ------>ZmHOX2a(1)         ------>ZmHOX2a(1)     --------->ARR11(3)   aaaggcgtctcctttgtccaattccttctcctctgcttctgctgcgcgtttgagtcctagagttggtcgaaaaggtaagagctttacagtctcttacctc  22912000                                                         <---------HSFB2a(2)                                                         --------->HSFB2a(2)                                                    <---------At4g35610                                                    --------->At4g35610                                                   --------->MYB52(2)     ----------->HVH21                                               <------MYB46(1)          ----------->RAV1(2)<---------                           --------->At4g35610 <---------HSFB2a(1)<------ZmHOX2a(1)     ------->TEIL         <---------ANAC46--------->ZAT18       <------MYB83     --------->ANAC58       <---------CCA1(2)    --------->ATHB12 --------->DAG2       --------->ANAC58      --------->ANAC58 <---------ZAT14   <-------TEIL     ---------->DOF2       --------->ANAC58  <------ZmHOX2a(1)    --------->ZAT14   gttgattcattgggtttacccaaaaagctcgctgaatcggtctcaaggaaggttagcttcgaggacaaggacaaccctgactctgttctgaatcttttga  22912100                                       <---------ANAC55(2)                                    <---------MYB52(1)                               --------->AtMYB61                              --------->MYB46(3)                            --------->ANAC46                         ------>ZmHOX2a(2)                       <-----------ARR10                       --------->ARR11(3)                       <---------ARR14(2)                       --------->ARR14(3)                       <---------ARR11(3)                       <---------AGP1  --------->ANAC55(2)                       --------->AGP1 <---------LBD16                       --------->ARR14(2)                     --------->At4g35610               <---------GLK1(2)  <---------ICU4        <---------ANAC46         --------->ZAT18<---------GLK1(1)               <---------ANAC58         <-------TEIL <---------CCA1(2)<---------ANAC46 <---------ANAC58         <---------ZAT14<------ZmHOX2a(2)       --------->ANAC46    <---------At4g35610   --------->ANAC58 -DOF2   --------->ZAT14--------->GLK1(1) <---------GLK1(2)   <---------At4g35610         --------->ANAC58   gaagtcatgggttcactgattctcagatctccaccatcgttacggattatccacaattgcttgtagctgatgctgagaaatcacttgctcccaagcttca  22912200  Previous    Next  AGI:  At1g61970.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22908171    to: 22911295    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g61980.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22911710    to: 22913253    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version