Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ---------->DOF2                                                                              <---------YAB1                                                                            --------->YAB1   ------->MYC3                                                            <---------YAB1   <-------MYC3       <---------HSFB2a(2)                                --------->YAB1 >MYB46(1)            --------->HSFB2a(2)                            <---------ARR11(3) >MYB83     <------MYB46(1)                        ----------->GT1   --------->ARR11(3) --MYB59    <------MYB83    --------->ANAC58   ---------->DOF2   <---------At4g35610 -GT1      <---------TOE1(2)--------->ANAC58 <---------YAB1      --------->At4g35610  <---------GLK1(2)   ttacatgtgtttgtaggtttatttcgagacaagaattagaaacagctatgaaagagtataatatgggagatgatattatgatcaaagagattatctcaga  22905400                                               --------->YAB1                                    --------->AHL20(2)                                --------->AHL20(2)                                <---------AHL20(2)                          <---------AHL20(2)                          --------->TOE2(3)  ------>MYB83          -------->HAHB4                        --------->ARR11(3)   ------>MYB46(1)       --------->YAB1      <---------YAB1    <---------ARR11(3) <---------MYB46(2)     <---------YAB1    <---------At4g35610<---------CCA1(2)   <---------MYB59       <---------TOE2(3)   <---------YAB1   agttgatgctgataatgtaagtcgaatatctcaatttataaaataccaaacacaatttgtttagtttaatgatagttttaaaatgttctaattcatattt  22905500                                                                                --------->YAB1                                                                               <---------ATHB12                                                                             --------->WOX13(1)                                                                         --------->ANAC46                                                              --------->At4g35610                                                              <---------At4g35610 <---------YAB1                                                           --------->At4g35610------>MYB83                <------ZmHOX2a(1)                          <---------At4g35610------>MYB46(1)  <-----            ---------->DOF2--------->AHL20(2)     <---------YAB1       --------->YAB1          ------   ttgtttgtttttaaaaaaggatggaagtataaattatcaagagttttgcaatatgatgaagagctgctcacaatcacaccaatcaaaattggttcaaccg  22905600                                     --------------->AtSPL3                                     --------------->AtSPL8                                    <---------ZAT14                     --------->AHL20(2)    <------ZmHOX2a(1)<---------AHL20(2)  <---------TOE2(3) --------->AHL20(2)        <---------AHL20(2) ----MYB59<---------GLK1(2)         --------->ZAT14     ----------->GT1  <-----------GT1   ------>ZmHOX2a(1) ->GAMYB  <---------ICU4 <---------AHL20(2)  --------->AHL20(2) ----------->GT1    --------->YAB1   aattaaggaccataatctccgatttaattcatttttagttcagtacataaaatttcgaatgtaatttggataaataaactgtccataatattcctcatac  22905700                          <-----------GT1                      <------------CBF                               <---------YAB1                <------------CBF                                   --------->AHL20(2)               -------->ATHB1                                      --------->ATHB51               --------->ATHB12                                    <---------AHL20(2)               <---------ICU4                                 <---------MYB59                   -----              <---------YAB1                                  ------->GAMYB               <---------MYB46(3)              <---------ATHB12      ---------->DOF2        --------->MYB52(1)       --------->DAG2            --------->WOX13(1)    --------->LBD16          <-----------GT1         ---------->DOF2           ------------>ATHB5    --------->ANAC46    <---------TOE2(3) <---------AHL20(2)<--------P   aatttgtttttggtccatcattggtattgtactctccgtaaaccgatttcggtttaagaattaaccgaattattttttttggcgaaaaagggttgttcgt  22905800                                                 --------->GLK1(2)                                                 <-----------ARR10                                                <---------GLK1(2)               ----------->HVH21                                           <------MYB83                <---------ANAC58                                           ----------->GT1             <---------ANAC58               *TSS                        <---------ANAC46     <-----------HVH21  <------------MYB.PH3(1)      <---------MYB52(2)                   <------MYB46(1)   <---------ANAC58 <------MYB46(1)   --------->REM1(1)                      --------->MYB59 --------->ANAC46    <------MYB83<---------- ----->ID1    <-------TEIL                --------->MYB46(2) <---------ANAC58--------->MYB59     <---   cgtctacaactagcgattcatttctcaaaattgagtcagatagttcggtagaatcttttcaagccgtgtcatttcttgttcggtaacagttttttctctt  22905900                                                                                          ---------->ID1                                                                                      <----------DOF2                                                                                  ------>ZmHOX2a(2)                                                                                 <---------GLK1(1)                                                                                 --------->GLK1(1)                                                                                 <------ZmHOX2a(2)                                          <---------HSFB2a(2)                    <---------At4g35610                                   ----------------->AGL2                       ------->TEIL                                <------MYB46(1)                                 <---------AGP1                                <------MYB83                                    --------->ARR11(3)                               --------->MYB59                                  <-----------ARR10                               <---------MYB46(3)                               <---------ARR14(2)    ------->TEIL              <--------P  --------->HSFB2a(2)                   --------->ARR14(2) -GT1                       <---------HSFB2a(1)                            --------->MYB52(1) --------HVH21 --------->ANAC46<---------AtMYB61                ----------------------->TaNAC69(2)   gtcatgtatgctctgatacaccatggaagaaggttggtccagttacagaaattgtctaatttcagagtttcagttcaaaacggatctgctttgtccaatt  22906000                        ----------->HVH21                  <---------ANAC46                                                                  -                 <---------At4g35610                    <----------DOF2                       -------             <---------ZAT6                    ----------->GT1                                -------             <-----------RAV1(1)              <---------TOE2(3)                            <---------         <---------ANAC58                   ---------->DOF2                           <---------ANAC46         <---------ANAC58                --------->TOE2(3)                       --------->ATHB12----    <----------DOF2 <---------At4g35610  --------->TOE1(3)<-----------GT1       <-------TEIL --------   ccttctcttttgctagtgttgctgatgcgacccttatagatagccttaaaggtaacaactttacagtctcttacctagttgattcattgggtttaaccac  22906100                                                     <---------GLK1(2)                                              --------->GLK1(1)                      ---------->DOF2         <---------GLK1(1)                    --------->ANAC58      <------ZmHOX2a(1)                    --------->ANAC58     ----------->GT1         --------->GLK1(2)        --------->HSFB2a(2)<---------ARR14(2)        <---------GLK1(2)    <---------HSFC1(2)<---------ARR14(2)        <---------ARR14(2)   <---------At4g35610   --------->LBD16 -------->ZAT2      --------->ANAC46 <------ZmHOX2a(1)--------->GLK1(2) >GAMYB --------->ARR14(2)   --------->At4g35610 <---------LBD16 -->TOE2(3)    ==================================HOX2a_HOX2a --GT1<---------TOE1(2)      --------->HSFC1(2)--------->ARR14(2)                         ---------->DOF2 ------>DOF2   =============================HOX2a_HOX2a                               <-------TEIL ->MYB46(3)    ------>ZmHOX2a(2)  <---------HSFB2a(2)--------->ARR14(2)        --------->CCA1(2)   aaagctcgcagaatcgatctccaagaaagtaagcttcgaggagaggagaaatccggattctgttctgagtcttcttacaagttatgggttcacaaagtct  22906200                                                                                             --------             <---------YAB1                                                                <------ZmHOX2a(1)           <---------ICU4        <---------ANAC46                               <---------ZAT14           --------->YAB1        <---------ANAC58                               --------->ZAT14           <--------HAHB4   --------->ATHB12                       --------->ANAC58  --------->ZAT14          <---------YAB1 --------->ANAC46           <---------GLK1(1)           --------->At4g35610        --------->YAB1  --------->MYB46(3)   --------->At4g35610   --------->ANAC58  <---------ZAT14 --------->GLK1(1)    -------->P <---------ANAC58   --------->GLK1(1)           <---------At4g35610   cagatttcaagtatcattactatctacccacgattgcttgcattagatgctgagaaatccattgctcccaagcttcagtctctgcagtccagaggagctt  22906300  Previous    Next  AGI:  At1g61950.1    Description:  CPK19 (calcium-dependent protein kinase 19); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK33 (calcium-dependent protein kinase 33), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G50700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17935.1); similar to calcium-dependent protein kinase [Solanum lycopersi Range:  from: 22903082    to: 22905611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g61960.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G62085.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22905815    to: 22907502    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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