Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Publications Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                            <-----------TGA1             <----------DOF2                              <-----------HVH21              ----------->GT1   ctcattccaattcatctttgcttcagcataatacgccatttcttgtagcaacttcagtatcgtcacagtatcatatctgcaaaacaaaacgaggtcaaaa  21566200        ----------->RAV1(1)       <------NtERF2      --------->ABI4(1)      ------>NtERF2                                                   --------->ALFIN1        -------  ------->GAMYB                       <-----------GT1           ---------->DOF2    <----------DOF2<--   tcaaacgccgccacaaattataagagatgaaatcgaatattaacgaaacgaaacaaaaacctctgcaaaagagtggcgatgtctgcttcactgatgaact  21566300   ------>ZmHOX2a(1)      -------->P                                     <----------ID1 >TEIL                   <-----------GT1                                 XXXXXXXXXXXXXXXXXXXX>MIR869.1 --------DOF2  <-----------GT1                      ------->GAMYB<-----------GT1                 ----   ctttcctcttcttattgttactgttatcaaccattttttgttcgtggtttgtaacagcaatcacatgttacgattgagccaaatctggtgttgatttcag  21566400     --------------->AGL15                                            ------>NtERF2    ----------------->AGL2                                            --------->ABI4(2) ------->HVH21<------ZmHOX2a(1)                      >>>>>>>ZML2    <------NtERF2 <-----------GT1   tgacaaaccctaattaggatttttgagaatgagagagagatactgggaaattgttctagggcttggagacggcgcatccaattgttaccggagatggaga  21566500                                                                <----------DOF2                                     ---------->DOF2      --------->ALFIN1                            <------ZmHOX2a(1)           ===================bZIP_DOF        <------ZmHOX2a(1)                ===================HOX2a_HOX2a          ===================bZIP_DOF       -----------                ================HOX2a_HOX2a             <---------TGA1a                   <----------ID1                ------>ZmHOX2a(2)    =============================bZIP_DOF               ----------->GT1        <------NtERF2    <------ZmHOX2a(1)              --------->TGA1a          <----------DOF2   --   agggaatcgcagcgatgatcggcgagaggaggagagtgtgaaagcgcgtgaagagcacgcgtgcggctttggttttttattttcttttgaagaggaaaaa  21566600                     ------------>AtMYB77                 <------ZmHOX2a(1)               --------->ALFIN1            --------->ALFIN1   ----------->HVH21<------ZmHOX2a(1)        <----------DOF2                                   <----- >GT1      <------ZmHOX2a(1)  *TSS         ------>NtERF2                         ----------->HVH21 -------->DOF2<------ZmHOX2a(1)<-----------HVH21                          <-----------GT1 <----------   aaaaagcgacggaggaggaggaggaacggttgcagtcacgctcgccgcttgactagatattagaatcttctacgattttccaaatgaccgatttgcccct  21566700                                                                    <<<<<<<<<<WRKY38                      <----------DOF2                               <<<<<<<<<<WRKY43          <-----------GT1  <-----------GT1                          <<<<<<<<<<WRKY26 <----------DOF2<-----------GT1  ---------->ID1                   <------MYB83 ----ALFIN1  <----------DOF2  <----------DOF2                     <------MYB46 -GT1 <------------------------ANAC81  <-----------GT1<-----------GT1   ccgatttaagttttacttttacggctttttttcttttcgtttttcgacatatgattttacgttatagttggtcaagttcttaatattttttctcttaaat  21566800                                          ----------->GT1                                         <----------ID1                                     ---------   caaatttattttttatatataatatttattttagaaatggaagagggcaaaaaaaattctctgtatgatatatatatatcttaaaaaaaattaagagtaa  21566900                           <----------DOF2                  ------>MYB46 -->GT1           ------>MYB83              <----------DOF2             <-----------GT1---------->DOF2   tttcaataaatttaaatacctactgtattctttattaatccaacatctttaatgatttttaatagcatatcatttaactaagcatatattaaagatttta  21567000             <----------DOF2         <-----------GT1                                              >>>>>>>>>RAP2.2        <-----------GT1                  ---------->DOF2  ----------->GT1   ttcataacatttacccttttaatacatagtagacagctgattataaagagtttgtctgtttcgttactacaatctaaaactacattatatatttcaaact  21567100  Previous    Next  AGI:  At1g58220.1    Description:  myb family transcription factor. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G09710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61600.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 21561908    to: 21566630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version