Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <------MYB46(1)                                                                      <------MYB83                                                                  <---------MYB46(3)                          --------->YAB1                        <---------ANAC58                         <---------YAB1                         <---------ANAC46        <-----------GT1 ------->TEIL                ------->GAMYB<----------DOF2 ->CCA1(2)   --------->ARR11(3)                   --------->At4g35610 <---------MYB46(3) -ARR11(3)   <---------ARR11(3)       --------->YAB1----------->GT1 <--------P >ARR11(3)  <---------CCA1(2)   <----------DOF2 --------->ETT(2)<---------ANAC58         ----------->GT1   gcttcaaaattcacatatctataatgtatcatagctttaatcaaaaaatgtcaacagaaaaaacctgcttgttggtgagattgagccaaggaggtttatt  20848400                                                                              <---------YAB1                                                                    --------->At4g35610                                                                    <---------At4g35610                                                          --------->ICU4    --------->YAB1               <---------AHL20(2)                       --------->YAB1      <---------ICU4      <----------DOF2                       --------->At5g28300    ------->TEIL--------->MYB52(1)   -   ------>ZmHOX2a(1)                --------->MYB46(3)  <---------ICU4     <---------YAB1         --- ------>ZmHOX2a(2)    <---------At4g35610  ----------->GT1<---------YAB1 --------->YAB1      <-------   tgatccttctttggtatatttttgacctgagagattgaacaaacacagtgaaatttgataatgactatgcagctatcatcataactgaaatcgtttatca  20848500                                                                                                    <                               --------->YAB1                                                       -                         --------->TOE2(3)  --------->ANAC46                          <---------ARR14(2)                   --------->ANAC46      <-------TEIL                                 --------->ARR14(2)                   --------->ANAC58   ----------->GT1                                 --------->GLK1(2)    <---------ARR11(3)   --------->YAB1<----------ID1                                <---------GLK1(2) -------->ANAC46   --------->ANAC58  --------->DAG2                            --------->At4g35610 -- ------>ANAC46   <---------ATHB12    <---------------AtSPL8                    <---------At4g35610 <- ----GT1         ---------->DOF2   ---------->DOF2  <----------DOF2       <----------DOF2          <-   acacaacatctattatccaataagcaatgttaatgagaaaaggtacaaacaatacttttgatgttctgagtaagtactttgagcttagaatctgatttgg  20848600                                                                   --------->At4g35610      <----------ID1                                               <---------ZAT2 --------HAHB4                                                     <---------At4g35610 -------->ATHB12                                                   --------->ZAT2 ------->ICU4                                                   ---------->DOF2                     - -----ZmHOX2a(2)   <---------ALFIN1                  ---------->DOF2         --------->AHL20(2)    -- --------YAB1    ----------->RAV1(1)     <-----------GT1       <---------MYB52(1)               <----   gatcattagggacgaagagcaacatcccttctctctgcaaatttttcgattttgcaaaagaaacagttaagctgagagataatataactcaaataagagc  20848700                                             <------ZmHOX2a(2)                                            <---------ARR11(3)                                         --------->LBD16                                          ---                                         ------>ZmHOX2a(1)                                        <--                                        <---------LBD16                                          <---                                     <---------ARR14(2)                                      ------>MYB83                                    --------->GLK1(1)                                        ------>MYB46(1)                                    <---------GLK1(1)   <---------ZAT18                     ---------                                  ===================HOX2a_HOX2a                            ---------                                  <------ZmHOX2a(1)     --------->ZAT14                     ---------                                  ==================HOX2a_HOX2a                            <---------MYB55(2)         --------->YAB1         --------->LBD16  ----------->HVH21                        --------->ZAT2 ----------->GT1               <---------LBD16------>ZmHOX2a(2)                         --------->ANAC46 -------->DAG2                 <-----------RAV1(2)      <---------ZAT14                --------->MYB46(3) -------->DOF2             --------->GLK1(1)<---------ARR14(2)                      <-----------GT1 ------ID1                 <---------GLK1(1)--------->ARR14(2)            <---------GLK1(2)--------->MYB46(3)   gaaaagtgtaatcttcatacaattctgagaaatccaggagttcctggatccttgacagtgctcttgtatttgactagcttctctatttgcccaccagcca  20848800                                                      ---------->DOF2                               < ------>ARR14(2)                                   <---------GLK1(1)                                - -------ARR14(2) <---------MYB46(3)                --------->GLK1(1)                                - ------CCA1(2)   --------->ABI4(2)              *TSS <---------ATHB12                            ---- >ANAC46         --------->MYB55(2)           <---------At4g35610                                <--- >ANAC58        --------->ALFIN1              --------->At4g35610                         ----------- >ANAC58   --------->MYB52(1)         <------ZmHOX2a(2)       <------------CBF <-----------GT1 ------   tatccaactgtagaaacggtggttctctgttttccagtcgatcaattcatcggaaatcaagcgaaattggaatctaggtttatactatagaacgggaata  20848900                                                                    --------->ANAC55(2)                                                                    ----------->GT1             <---------ICU4                                         <---------ANAC55(2)   <---------ETT(1)                                             <-----------HVH21   --------->ANAC46                                            <------MYB46(1)   ----------->HVH21                                           <------MYB83 ---------ARR14(2)                                         --------->ATHB12 -------->GLK1(2)    ------>MYB46(1)                      --------->ICU4 -------->ARR14(2)   ------>MYB83                         <---------YAB1 ----->ANAC55(2)   <---------MYB59                      <---------ICU4                 ----------->GT1 ------ANAC55(2)   --------->MYB46(3)                  --------->ICU4     --------->AHL20(2) >GT1        --------->YAB1           --------->AHL20(2)--------->YAB1 ----------->GT1--------->DAG2 --->ICU4   <---------ATHB12----------->HVH21  --------->SPL7<---------WOX13(1)      ---------->DOF2   agtatccgacccgaatcatgacccaacttactgacccgaattaaactgctacggcccattatgattggtcatgtgataaaatgaacaaaaagtcaaaact  20849000                                                                       ----------->HVH21                                                                       <---------ETT(1)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                   <---------GLK1(1)                                                                   --------->CCA1(2)                                                                   --------->GLK1(1)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                             --------->ALFIN1                                                           --------->ALFIN1        <---------ANAC58                                                           <---------ANAC46        <---------ANAC58                                                          <---------MYB52(1) ------>MYB83                                           --------->At4g35610    --------->ARR14(2)                            ------>ZmHOX2a(1)         --------->MYB52(1)     ------>MYB46(1)     ----                           --------->TOE2(3)      ---------->DOF2 <---------ARR14(2)       <------ZmHOX2a(1)                      <-------TEIL         <---------At4g35610--------->REM1(2) <----------DOF2<-----   aattaggggcatcaaaatgtaagattcatccttatgtcgattttcatctgatcaaagaccggtgtgtagatatccgaccaagctttcttgagaggagagt  20849100          <---------ARR14(2)         <---------SPL7     <------MYB83     <------MYB46(1)     <---------ANAC46    <---------MYB46(3)    <---------DEAR3(1)    --------->MYB52(2)                                                           <-----------HVH21    --------->MYB46(2)                                                          --------->ANAC46    --------->MYB55(2)                                                          ------->GAMYB  <---------MYB52(1)                                                           --------->MYB46(3)  <---------ARR14(2)     --------->ZAT14                                   <----------DOF2         <-  --------->ARR14(2)     <---------ZAT14                                  <---------ANAC58         -- ----->MYB52(1)   --------->REM1(1)     <-----------HVH21     ---------->DOF2--------->MYB52(1)    <- ----ZAT14--------->ARR14(2)      <----------DOF2       ------->TEIL      <---------ANAC58        <--   accggttcggtggaacggctacttctctaaactgaactttcccatcagacatttcatgagccttcaaagttcaatggcttaaccgtcataggctcggttt  20849200    --------->LBD16   --------->ANAC55(2)                                                                  <---------YAB1   <---------ANAC58                                                                   <---------ICU4   <---------ANAC46                                                                   --------->YAB1   <---------ANAC58                                                                  --------->ICU4  <---------LBD16                                                                 --------->AHL20(2) ------GAMYB                                                                   --------->TOE1(3) ------->At4g35610           <----------DOF2                                   --------->TOE2(3) --------At4g35610         ------->TEIL                                  --------->ANAC46--------->YAB1 ---------RAV1(1)   ------>NtERF2          <---------ATHB12----------->GT1  <---------ALFIN1   cagttgcggattgaatagactctgccatggactttaacaccttcaatgactaaattcaaacctgtaaaatagcatacaacaccttaaattatgatagtct  20849300  Previous    Next  AGI:  At1g55750.1    Description:  transcription factor-related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT3G61420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45216.1); contains InterPro domain BSD (InterPro:IPR005607); contains InterPro domain Kelch related (InterPro:IPR013089) Range:  from: 20843861    to: 20848848    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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