Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------->TEIL                --------->MYB52(1)             <---------ZAT2                                        <---------ANAC46             --------->At4g35610                          <---------YAB1             <---------At4g35610                          <---------TOE2(3)             --------->ZAT2                              <---------AHL20(2)           <---------ZAT14 --------->ANAC58              --------->YAB1       --------->DAG2--------->GLK1(2)                   --------->AHL20(2)    ---------->DOF2  <---------ARR14(2)                <---------YAB1   <------ZmHOX2a(1) --------->ARR14(2)             <---------YAB1 ----------->GT1 --------->ZAT2 ---->HSFB2a(2)----------->HVH21                    <---------AHL20(2)             --------->At4g35610 -----HSFB2a(2)----------->TGA1    ---------->DOF2  --------->AHL20(2)             <---------ZAT2 ----LBD16 --------->ZAT18 --------->ANAC58      <----------DOF2  --------->ALFIN1--------->GLK1(2)   ggagaggaaagagtgagctgacgaatctgaagcaatcgaaagaagaaaatgctttttattaatattatgtggtgaagactgaagaagctgggcgagacac  19860600                     <----------DOF2                ------>MYB83                                      --------->ARR11(3)                ------>MYB46(1)                        <---------AHL20(2)              --------->AtMYB61                        --------->AHL20(2)              <---------MYB111(2)       --------->ARR11(3)        <---------GLK1(2)              --------->DEAR3(1)   <-----------HVH21  --------->AHL20(2)              <---------ALFIN1    ------>ZmHOX2a(1)   <---------AHL20(1)             --------->MYB46(3)   <----------DOF2     <---------AHL20(2)<---------ANAC46      --------->CCA1(2)         <---------ICU4  --------->YAB1    <---------ARR11(3)     <---------ARR11(3)   --------->TOE2(3)     --------->ANAC55(2)    ---------->ID1     --------->ARR11(3)   <----------DOF2  <----------DOF2      <---------TOE2(3)               -----     *TSS  --------->AtMYB61  <-----------GT1  ---------->ID1   <---------TOE1(3)               <----   tcgatgagatataccaccaccctctttactttaatcctttcaggtctttttcgtaatttaatttttaagatttttcgtctaatttgtttttgattttagg  19860700                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                               ------                                                                                               ------     <---------ICU4                                                                            <-----   --------->ARR11(3)                                                                          <-----   --------->GLK1(2)         --------->AHL20(2)                         --------->YAB1        <------   <---------ARR11(3)        <---------AHL20(2)                    <---------AHL20(2)     ===========  --------->RVE1(1)          --------->AHL20(1)         --------->ZAT2 <---------ATHB12   -----------  --------->CCA1(1)          <---------AHL20(1)         <---------At4g35610         --------------->AtSPL8 ------>GT1         <---------ZAT6                      --------->At4g35610         --------------->AtSPL3 ------ID1          <---------ANAC46    <---------AHL20(2)   --------->YAB1    --------->YAB1 -------   gaaaaaatctttacacattgtggtgttcaaatttattccgatttttttgggtctcttcagctctcatatttcaatgataaatcaaaaccgtactaaataa  19860800       <-------TEIL             <-------TEIL       ------->TEIL             --------->ZAT18 --------AHL20(2)               <---------ZAT18 ------->AHL20(2)               <---------ZAT14 -------AHL20(2)             <---------ANAC58 ------>AHL20(2)             <---------ANAC58                                         <---------DAG2 --->AHL20(2)               <---------------AtSPL8                                    <----------DOF2 --->AHL20(1)         <---------------AGL15                                         ------->TEIL ----AHL20(1)         --------------->AGL15                                       <---------ZAT18 ----AHL20(2)        <-----------------AGL1                                       --------->ZAT18 ---AHL20(2)   --------->ARR11(3)                                               --------------->AtSPL8 =====================================MADS_MADS                                 <---------------AtSPL3 ---->AGL15    <---------ARR11(3)   <----------DOF2                             <---------------AtSPL8 -->AHL20(2) ----------->GT1--------------->AtSPL8    ---------->DOF2       ---------->DOF2<---------   attaatatgtacatgaagataatactcatttgggtacactttcgagtttatagtagtaaagagagagaacctctaaaacaaaggtgtactttactttgaa  19860900                                                         <---------ZAT18                             --------->ICU4   --------->DEAR3(1)                 <---------TOE2(3)           --------->ANAC58          ------>ZmHOX2a(1)              <---------AHL20(2)             --------->ANAC46         <---------ANAC58        ----------->GT1    ---------->DOF2   --------->ANAC58         <---------ANAC58  --------->At5g28300      --------->YAB1   <---------At5g28300       --------->TOE2(3) ----------->GT1 <---------TOE1(3)--------->MYB59       <---------ZAT6--------------------->WRI1 -DOF2  --------->YAB1  --------->YAB1   <-----------HVH21       <---------At4g35610   atagggtaaattgtaatttaaggtattaataaagattaggcccattcacggcccattagtgttcttcatcttccttatctgtttctcccgctctctctct  19861000                                                                                        <----------DOF2                                                                                  ----------->GT1                               --------->ZAT14                             <---------------AGL15                               <---------ZAT14                             --------->TOE1(3)                               <---------ZAT18                             --------->TOE2(3)                               --------->ZAT18                             --------------->AGL15                             <---------At4g35610                          ----------------->AGL2                             --------->At4g35610                          <-----------------AGL1                           <---------DEAR3(1)                             ----------------->AGL1                           <---------RAP2.3(3)            <----------DOF2 ----------------->AG                      <---------ANAC58         <<<<<<<<<TBF1 <---------ANAC46  ---------->DOF2                      <---------ANAC58   <<<<<<<<<TBF1   <---------ANAC58 <-----------------AGL3                   *TSS  --------->ARR14(2) <<<<<<<<<TBF1<---------ANAC58 ----------------->AGL3   ctctctctctctctctctctctcttcgtgtctgcgcactcttcttcttcttcttcaatggctttcgcgtttgagaaaccataaaaggaaacttttcagag  19861100                            --------->LBD16                           <---------ANAC58                           <---------ANAC55(1)                           <---------ANAC46                           <---------bZIP60(2)                           <---------ANAC58                         --------->SPL7                      <---------ANAC58                      <---------ANAC58                    ----------------------->TaNAC69(2)                            <---------YAB1            ------>ZmHOX2a(1)                        <---------ANAC58      <---------CCA1(2)          ----------->RAV1(2)   ------->TEIL         <---------ANAC58    <---------CCA1(2)  <--------   ttttctcttgtctcctgttcgtctccgtgccgtgtatgtcactaaatttgtgagtgcttctgcattctcaaactcttatctcttgtgatttgaaatcatc  19861200                    --------->GLK1(2)                                  <-----------RAV1(2)        ---                    <---------ARR11(3)                          <-----------GT1                  <---                 <---------AHL20(2)                         --------->ATHB12      <---------MYB46(3)       <---------TOE2(3)                                  <---------WOX13(1)     <--------P     -----  --------->GLK1(1) --------->ARR11(3)                  --------->ATHB12<---------TOE1(3)  <---------AHL20(2) -ATHB12        --------->YAB1                         <-------TEIL  <-----------HVH21     --------->AHL20(2)   tctgaaatcaaggatttataaaaatctatttctaatttgatgaaaattatgtagaaattcattgatttatcgttcaggtactggttgtttgattttattt  19861300                    <<<<<<<<<<WRKY43                    <<<<<<<<<<WRKY38                  <------MYB46(1)      <---------YAB1<<<<<<<<<<WRKY26                                   --------->WOX13(1)           < ------->ID1      <------MYB83                        --------->At4g35610                           - --------GT1      ----------->GT1                     <---------At4g35610<---------ATHB12          <- ------>HVH21    --------->MYB59              <---------YAB1    ------->TEIL                   <-----   gacctattttgatttcgatttggtcaaatactgtttttgcagaggtttatcaatggagatgaaatgcacatttcaatcaactcgtgctccattccaatgc  19861400      <---------PCF2                                                  <---------ANAC58    --------->MYB55(2)                                                <---------ANAC58    <---------MYB46(3)                                          <-----------GT1 <------MYB83                                               ------>MYB83 <------MYB46(1)                           <---------ATHB12 ------>MYB46(1) ---------MYB46(3)                        ------>MYB83    <---------MYB59 <----------DOF2 -------->MYB55(2)                        ------>MYB46(1) --------->TOE2(3) ---------DOF2                         --------->MYB46(3)<---------ANAC55(2) ----ZAT18                       ---------->DOF2         --------->ANAC55(2)       --------->WOX13(1)   gcttggtggttcccaaattcaatctattggactctcaaagaaccaatcgttttgagaatacctaattcacttgcttctttgaggtctatcagacacttgg  19861500  Previous    Next  AGI:  At1g53240.1    Description:  malate dehydrogenase (NAD), mitochondrial. Identical to Malate dehydrogenase 1, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9ZP06;GB:Q8LBB9;GB:Q9MAH7); similar to malate dehydrogenase (NAD), mitochondrial, putative [Arabidopsis thaliana] (TAIR:AT3G15020.1); similar to Malate dehydrogenase, mitochondrial precursor (GB:Q43744); contains InterPro domain Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal; (InterPro:IPR015955); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Malate dehydrogenase, NAD-dependent, Range:  from: 19858283    to: 19860605    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g53250.1    Description:  endonuclease. similar to endonuclease [Arabidopsis thaliana] (TAIR:AT1G53800.2); similar to endonuclease [Arabidopsis thaliana] (TAIR:AT1G53800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39381.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66607.1); contains InterPro domain Intron-encoded nuclease 2; (InterPro:IPR003611) Range:  from: 19861019    to: 19862924    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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