Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <----------DOF2                                   <-                                    <---------TOE2(3)               <---------ICU4                ---                                  <---------AHL20(2)               --------->ICU4                <---                                 --------->AHL20(2)  <---------ANAC58       --------->AHL20(2)   <---        --------->AHL20(2)<---------ARR11(3)    <---------DAG2    <---------AHL20(2)  <---------AHL20(2)      ----------->GT1     --------->ARR11(3) <-----------GT1     --------->YAB1  <-------TEIL    <--- -----TOE2(3)    --------->TOE2(3)--------->AHL20(2) <---------ANAC58   ----------->GT1 <-----------GT1   gatgaagtaagtaaataaaccacaaaaacatctcatttaatgaaaaaaaaccttttcgttcattctataaaaattagaaaaaatacattttatccatttg  19840400                                                                            --------->AHL20(2)                                                                         --------->YAB1                                                                     --------->AtMYB61                                                                     <---------MYB59                                                                     ------->GAMYB--------->DAG2                                                       <---------ANAC58------>MYB83                                                       <---------ANAC58------>MYB46(1)       <----------DOF2                               <------MYB83  -------->P    ---------->DOF2    <-----------GT1                                  <------MYB46(1)--------->MYB46(3) --------MYB52(1)                                  <--------P      --------->ANAC58 ------>TOE2(3)              <---------AHL20(2)  --------->ATHB12--------->MYB46(3) ------ANAC58                --------->AHL20(2)  <---------MYB46(3)--------->ANAC58               --- ------ANAC46          <---------At4g35610   <---------AHL20(2) <---------At4g35610          -------- ------ANAC58      --------->TOE2(3)   --------->TOE2(3)        --------->At4g35610          <-------   cgttaatttcttttctatttatcttagctaataaaatcaattcttaattaatggttggcatgcttcagcaaccaaacataaaataaagcaaaatcagctc  19840500                                     --------->ZAT6                                        --------->ANAC58                                    --------->ZAT14                                        --------->ANAC58                                    <---------ZAT18                                      <-----------GT1                                    --------->ZAT18                                   <---------ICU4                                    <---------ZAT14                                   ------>MYB83                                  <---------ZAT18                                   --------->TOE2(3)      --------->ANAC46            --------->ZAT14                                   <---------MYB59      --------->ANAC58            --------->ZAT18                             --------->YAB1   ------      --------->ANAC58          --------------->AtSPL8               ------>ZmHOX2a(1)------>MYB46(1) --------->YAB1                 <---------------AtSPL8       --------->ANAC55(2) <-----------GT1 ------>YAB1                 ---------->DOF2          <---------AHL20(2)     <---------YAB1--------->ANAC46 ->At4g35610              <------ZmHOX2a(2)          <---------AHL20(2)    --------->YAB1<---------ICU4 --At4g35610   --------->AHL20(2) <---------ZAT14    --------->AHL20(2)   --------->AHL20(2)  <------   taataaaaacgaaacatttacatatgagatcaaaagtgtacactaattgaagtcattaattttaagtaatcctccatttattataacctaattacgacac  19840600              --------->YAB1           <--------HAHB4           --------->YAB1          <---------YAB1        --------------->AGL15              <---------AHL20(2)       ----------------->AGL2              --------->AHL20(2)       ===========================================MADS_MADS       ----------------->AGL3             --------->AHL20(2)       <-----------------AGL3             <---------AHL20(1)       ------>ZmHOX2a(2)                  <---------AHL20(2)      <------ZmHOX2a(2)                <---------AHL20(2)     --------->AGP1                    --------->AHL20(2)            --------->YAB1     <---------AGP1                   <---------AHL20(2)             --------->AHL20(2)     --------->ARR11(3)               --------->AHL20(2)            <---------ATHB12          -------     <---------ARR11(3)    <-------TEIL--------->AHL20(1)  --------->YAB1           ------->TEIL >NtERF2<---------------AGL15     --------------->AGL15    <---------ICU4       --------------------- ---ALFIN1<---------AHL20(2)      <---------YAB1          --------->ICU4 <----------ID1---------->DOF2   cgttttagatctataattagaactccatatacatttctaattaaattattttcaaatgcaaaaatgaccaataaaaaaacaaaatgaatcaaagaaaaaa  19840700                                                           --------->LBD16                                                          <---------ANAC55(1)                                                          --------->ANAC55(2)                                                          <---------ANAC55(2)                                                          <---------ANAC46                                                          <---------ANAC58                                                          <---------ANAC58                                                        ------>MYB83                                                        ------>MYB46(1)                             -                                                     <---------HSFB2a(1)                            -        --------->YAB1                               --------->HSFB2a(1)                           --       <---------ATHB12                        --------->AHL20(2)             *TSS                 --   ------------>CBF          ----------->GT1--------->AHL20(2)         ---------->DOF2           ----   --------->MYB46(3)       ----------->GT1--------->AHL20(2)          ============================== --->DOF2               ---------->DOF2    <---------AHL20(2)      --------->ZAT18            ------- --->ANAC81 --------->AHL20(2)  --------->AHL20(2) <-----------GT1----------->GT1             -------   gagtaaccaatgaaaaaaatagaataaaaagagataaaatgcgaaataaataaaaaccttccgtgagagtgcaaaaagaagagaaattttagaatcaaga  19840800                                             --------->GLK1(1)                                             <------ZmHOX2a(2)                                             <---------GLK1(1)                                            --------->ARR11(3)                                            <---------ARR11(3)   <---------TGA1a                          --------->ARR14(2)   --------->O2                             <---------ARR14(2)   <---------O2                             <---------AGP1   ===================================bZIP_DOF------>ZmHOX2a(2)   --------->TGA1a         <----------DOF2  <-----------ARR10 -------->DEAR3(1)       ============================HOX2a_HOX2a                                   <- -------->TOE2(2)        ------>ZmHOX2a(1) <---------CCA1(2)                                     ---- ------->MYB46(3)        ===========================HOX2a_HOX2a                             --------- ------->DEAR3(2) <---------ALFIN1      <---------LBD16                                     <-------- ----->MYB52(1)  ====================================HOX2a_HOX2a                            --------- ============bZIP_DOF<---------ALFIN1<---------At4g35610                                   --------->MYB59 -->ANAC58       ------>ZmHOX2a(1)   --------->At4g35610                                  <---------- -->ANAC58       ===================================HOX2a_HOX2a                  --------->TOE2(3)<--   aaccgacgtctctctcttcctcacctcctctttcttctctgcttcggatctctctcttctctctctctctctccctgattaaacctctaaaatcaggtaa  19840900    <----------DOF2 ----------GT1 ----->ICU4                                                             ------>ZmHOX2a(1) -->GT1                                                                <---------ANAC46            <- -ANAC55(2)--------->YAB1                                              --------->TOE1(2)          <-- >ANAC55(2)<---------ICU4                         <---------GLK1(1)    <---------LBD16       ------->TEIL -RAV1(2) <---------ATHB12             <----------DOF2      <-------TEIL--------->LBD16   --------->ANAC55(2) -------ICU4                       <---------GLK1(2)    <---------TOE1(2)--------->LBD16  <---------ANAC55(2)   ttatctcttttaatcatcaccataatcgtcttctctagcttctttttttttgaattcccagtttcattttgttcctgggaaaaacaaaaaaaacgtattt  19841000        <------MYB83        <------MYB46(1)       <---------MYB46(3)      <---------ANAC46                                                                  <---------ICU4    <------MYB83                            <---------DAG2                              --------->ATHB12    <------MYB46(1)                         <----------DOF2                            <---------YAB1   --------->MYB111(1)        <---------TOE2(3)                                        --------->ICU4 --------AHL20(2)  >>>>>>>>>ARR2     --------->YAB1                 <---------LBD16  --------->YAB1 -------AHL20(2)  --------->ATHB12  <---------YAB1     --------->ARR11(3)  --------->MYB52(2)       <   tttatttggtgggttttgtttgattgtgaatttatgttatcatcaactttatctgaagaaattgcattgttctgggtttgtttgttttcatgatttcaat  19841100                                                                                             <-------                                                                                            <-------GAMYB                                                                                         <---------ANAC46                                                                                        <---------At4g35610                                                                                        <---------ZAT2                   --------->ARR11(3)               <---------GLK1(2)                <---------At4g35610    <---------MYB46(3)                              --------->ARR14(2)              <-----------RAV1(1)   <---------WOX13(1)    <---------AtLEC2           <---------ARR14(2)           <----------DOF2<---- ---------YAB1    <---------CCA1(2)              <---------ANAC46          <----------DOF2 <---------MYB46(3)   ctctgattgttgatttttgtttatcttgcagggagtttttttcttctggtttcggattctcagaaaaattagcaagtctttgtcttttgctgctggttgc  19841200                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                   --------->LBD16                             --------->TOE2(3)          ---------->ID1  <---------YAB1                      ------>ZmHOX2a(1)   <---------TOE1(3)      <---------LBD16    <---------ANAC46 -P <------NtERF2 <-----------GT1         <---------TOE2(3)     ------>ZmHOX2a(1)  --------->MYB46(2) -----AtLEC2  <----------DOF2--------->YAB1          ----------------------->TaNAC69(2)             <   atagcccccattgaagcttttttcctctcaatcttaatgttctcaaggttagagttttgttccttcctccggttctgattgtagttaggcgtaatgggct  19841300  Previous    Next  AGI:  At1g53190.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G15070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39354.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 19840778    to: 19843895    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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