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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
-------
------>
ZmHOX2a(1)
-------
<---------
ARR14(2)
<------
-------
GLK1(2)
--------->
ARR14(2)
--------->
AHL20(1)
<---------
ANAC58
-----
ARR11(3)
--------->
ARR11(3)
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC58
---->
ARR11(3)
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
TOE2(3)
<---------
ANAC46
----
CCA1(2)
<---------
AHL20(2)
--------------->
AtSPL8
------->
TEIL
<---------
O2
tattctccaatatacacatatttaaaatcctcttactattagactacgtactacaaaatatactaatgtatataaacagagaaatcacatggcttgtgga
19834700
<---------
YAB1
-------->
ATHB1
--------->
ATHB51
--------->
YAB1
<---------
ICU4
<---------
AHL20(2)
<--------
HAHB4
-------->
HAHB4
<---------
ATHB51
--------->
ICU4
<----
<---------
AHL20(2)
-----
<<<<<<<
GRF7
<---------
YAB1
<---------
ATHB12
-----
----------->
HVH21
--------->
WOX13(1)
------->
TEIL
------>
ZmHOX2a(1)
<-----------
HVH21
--------->
YAB1
<---------
MYB46(3)
<----
-->
ZAT18
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
ANAC55(2)
-->
ZAT14
<---------
WOX13(1)
--------->
ANAC58
<----------
DOF2
<---------
YAB1
--------->
ANAC55(2)
---
ZAT14
--------->
ATHB12
---------->
DOF2
------->
TEIL
<---------
YAB1
--------->
ICU4
<
ctgtcctgacattgattaattattatgtcatcgcttaagcaatcatagttttgttgaatctttttttatttcttatagttgttgccaaaattatgtattt
19834800
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<----------
DOF2
--------->
ATHB51
------>
MYB83
<---------
ZAT18
<---------
ICU4
------>
MYB46(1)
--------->
WRKY38(1)
--------->
AHL20(2)
<---------
ALFIN1
--------->
WRKY12
<---------
YAB1
--------->
MYB46(3)
--------->
TOE2(3)
--------->
ICU4
<-----------
GT1
<---------------
AGL15
<---------
YAB1
-----
AHL20(2)
--------------->
AGL15
--------->
YAB1
---->
AHL20(2)
--------->
TOE1(3)
----------->
GT1
---->
AHL20(1)
==========================================================
-----
AHL20(1)
----------------->
AGL3
--------->
HSFB2a(2)
-----------
GT1
<-----------
GT1
<-----------
GT1
<---------
HSFB2a(2)
<---------
AHL20(2)
tattacccactttagatacctctaattttacataagtttcaatataccttatatagttgactctattgctctagaattgtaattattttttattttgcaa
19834900
--------->
AHL20(1)
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
TOE2(3)
--------->
GLK1(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR14(2)
--------->
ANAC58
--------->
LBD16
--------->
ANAC46
<-----
<---------
At5g28300
--------->
AHL20(1)
------
<---------
YAB1
--------->
ARR11(3)
<---------
AHL20(1)
--------->
YAB1
<---------
AHL20(1)
--------->
TOE1(3)
--------->
AHL20(2)
--------->
AHL20(2)
--------------->
AGL15
--------->
LBD16
<---------
AHL20(1)
<---------
AHL20(2)
--------->
YAB1
----------------->
AGL2
<---------
LBD16
<---------
ARR11(3)
<---------
ARR11(3)
<---------
YAB1
=
==================================================================================================
----------------->
AGL3
<---------
LBD16
--------->
ARR11(3)
--------->
ARR11(3)
--------->
YAB1
-
====================
MADS_MADS
---------->
TaMYB80
--------->
AtLEC2
<-----------
GT1
--------->
ICU4
<--
taagttccaatttcagcattatttttcaccgggaaaatccttaaaatattctatgcaaaatccaatatattcactccacatagataataataaaaaactt
19835000
<------------
CBF
--------->
ATHB51
<---------
ZAT18
--------->
ATHB12
--------->
ZAT18
<--------
ATHB1
<---------
PCF2
<---------
ICU4
--------->
ALFIN1
-------->
HAHB4
------->
MYC3
<---------
ATHB51
<-------
MYC3
--------->
AHL20(2)
--------->
O2
--------->
ICU4
<---------
O2
--------->
GLK1(2)
<---------
AHL20(2)
--------->
TGA1a
<---------
GLK1(2)
----------
AGL15
<---------
TGA1a
<---------
AHL20(2)
--------->
AGL15
<-----------------
AGL1
--------->
LBD16
=====================================
bZIP_DOF
<---------
HSFB2a(2)
--
==========
MADS_MADS
<----------------
PIF3(2)
--------->
HSFB2a(2)
---
--------->
DOF2
----------------->
AGL1
<---------
LBD16
<------------
CBF
<--
-------
YAB1
------>
NtERF2
--------->
AHL20(2)
<-------
TEIL
----------
ataaaagaaataattgaagaaaggctgcccatgtgggcacttccaaataaatctccagaatcgatgcttcaaatacattggatgtttactaaacaacaca
19835100
<---------
ARR14(2)
--------->
GLK1(2)
--------->
ARR14(2)
<---------
GLK1(1)
---------->
DOF2
------>
ZmHOX2a(2)
--------->
ANAC46
<------
ZmHOX2a(2)
--------->
MYB46(3)
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
<-----------------
AGL1
--------->
ARR14(2)
<----------
DOF2
*
TSS
<---------
MYB52(2)
--------->
GLK1(1)
<----------
DOF2
--------------->
AGL15
------->
CCA1(2)
--------->
ANAC58
--------->
LBD16
--------->
ANAC58
--
------>
ARR14(2)
<---------
ALFIN1
<---------
HSFB2a(1)
--------->
ANAC46
--------->
GLK1(2)
-------
ARR14(2)
------->
GAMYB
----------->
RAV1(1)
<---------
ARR14(2)
--------->
ANAC58
<---------
GLK1(2)
->
RAV1(1)
--------->
MYB46(3)
----------->
GT1
<---------
ARR11(3)
<---------------
AGL15
gatatgaa
caaacttcaacaaacaaacacacccacaaaggaaaatccgaagacccgatctttgttataaaacacacaacttctctctttttagaatctct
19835200
================
HOX2a_HOX2a
------>
ZmHOX2a(2)
--------->
ARR11(3)
<----------
DOF2
<---------
ARR11(3)
<-----------
GT1
<---------
ANAC55(2)
--------->
YAB1
<-----------
GT1
<------
ZmHOX2a(2)
--------->
ATHB12
<----------
DOF2
--------->
ARR11(3)
<---------
ANAC55(2)
<------
ZmHOX2a(1)
-------->
ID1
<----------
DOF2
---------->
DOF2
--------->
ANAC55(2)
<--------
tgtcttcttctttttaactttcttttgtaatctcttgtctgaaaaagaa
atggatcatgtaagttcaagtgagttacttattgatgatcttcttgaggat
19835300
-------->
P
--------->
AGP1
<---------
ARR11(3)
<---------
GLK1(2)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
At4g35610
----------->
ARR10
--------->
ARR11(3)
------>
ZmHOX2a(1)
<---------
TOE1(3)
------>
ZmHOX2a(2)
------
<-----------
GT1
<---------
TOE2(3)
<------
ZmHOX2a(2)
------
<----------
DOF2
<---------
HSFB2a(2)
--------->
WOX13(1)
--------
-
TOE2(3)
--------->
HSFB2a(2)
--------->
ETT(2)
<-----------
HVH21
<<<<<<<<<
TBF1
<-------
tactggttctttgagaacttatttacaagaaggtcgagaggcttaaggtattgtcactcagatccttacccctcttcttcttctacttcgacttctcctg
19835400
--------->
HSFB2a(1)
<---------
HSFB2a(2)
--------->
HSFB2a(2)
------>
ZmHOX2a(2)
--------->
HSFC1(1)
<--------
--------->
HSFB2a(1)
---------
<------
MYB83
<------
ZmHOX2a(2)
<------
MYB46(1)
<---------
ARR14(2)
<---------
HSFB2a(1)
<----------
DOF2
<---------
AGP1
<---------
HSFC1(2)
------>
ZmHOX2a(2)
<---------
<---------
ARR11(3)
<---------
HSFB2a(1)
--------->
ARR11(3)
--------->
ARR11(3)
--------->
At4g35610
<---------
CCA1(2)
<-------
TEIL
--------->
HSFC1(2)
<------
ZmHOX2a(2)
<------
NtERF2
--->
LBD16
--------->
GLK1(2)
<---------
HSFC1(1)
--------->
ARR11(3)
<---------------
AGL15
--------->
ARR14(2)
>
ZmHOX2a(1)
--------->
ARR14(2)
--------->
HSFC1(2)
<---------
At4g35610
<---------
ARR14(1)
--->
RAV1(2)
<---------
ARR14(2)
<---------
HSFC1(2)
<---------
ICU4
--------->
DAG2
--
LBD16
<---------
ARR14(2)
>>>>>>>
ZML2
<---------
ARR11(3)
--------------->
AGL15
<---------
ARR11(3)
aaaaaatgggagattcagatattgggaaggttctagaagcttccacagggcgatctttaatcagggcatcttctatagatagtagagaaggcggatctca
19835500
--------->
ARR14(2)
<---------
bZIP60(2)
-----
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
MYB52(1)
<-------
----------->
HVH21
<---------
HSFB2a(2)
========
--------->
At4g35610
--------->
HSFB2a(2)
---------
<---------
ZAT2
--------->
AtLEC2
<--------
--------->
ZAT2
<---------
ANAC58
<--------
<---------
At4g35610
--------->
ICU4
<---------
ANAC58
--------->
ARR14(2)
------->
TEIL
<---------
MYB52(1)
<---------
ANAC46
<---------
ARR14(2)
-
GLK1(1)
<---------
DEAR3(2)
<-------
TEIL
<------
MYB83
--------->
ALFIN1
>
GLK1(1)
<---------
DEAR3(1)
<---------
TOE2(3)
<------
MYB46(1)
<-------
MYC3
<----
--
ARR10
<---------
ANAC58
---------->
DOF2
--------->
MYB59
------->
MYC3
<-----
gacgaagctgacgggccggttctctgaaaagattagggttcaagaacagagacaagttgggtcttccttgcagaagaaggaacatgtggttcttcctaaa
19835600
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AGI:
At1g53180.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15115.1)
Range:
from: 19835109
to: 19836563
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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