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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                               <---------YAB1                                                -------
                          ------>ZmHOX2a(1)                                                  -------
                      <---------ARR14(2)                                                     <------
-------GLK1(2)        --------->ARR14(2)               --------->AHL20(1)               <---------ANAC58
-----ARR11(3)         --------->ARR11(3)  <---------ANAC55(2)       <---------AHL20(2)  <---------ANAC58
---->ARR11(3)     --------->AHL20(2)      --------->ANAC55(2)<---------TOE2(3)          <---------ANAC46
----CCA1(2)       <---------AHL20(2)     --------------->AtSPL8  ------->TEIL      <---------O2
 
tattctccaatatacacatatttaaaatcctcttactattagactacgtactacaaaatatactaatgtatataaacagagaaatcacatggcttgtgga  19834700
                  <---------YAB1
                -------->ATHB1
                --------->ATHB51
                --------->YAB1
                <---------ICU4
                <---------AHL20(2)
                <--------HAHB4
                -------->HAHB4
               <---------ATHB51
               --------->ICU4                                                                  <----
            <---------AHL20(2)                                                                 -----
    <<<<<<<GRF7<---------YAB1         <---------ATHB12                                         -----
  ----------->HVH21                 --------->WOX13(1)                                      ------->TEIL
  ------>ZmHOX2a(1)   <-----------HVH21--------->YAB1                      <---------MYB46(3)  <----
-->ZAT18    --------->AHL20(2)   --------->ANAC58            <---------AHL20(2)          <---------ANAC55(2)
-->ZAT14   <---------WOX13(1)    --------->ANAC58       <----------DOF2<---------YAB1    --------->ANAC55(2)
---ZAT14 --------->ATHB12      ---------->DOF2       ------->TEIL   <---------YAB1 --------->ICU4  <
 
ctgtcctgacattgattaattattatgtcatcgcttaagcaatcatagttttgttgaatctttttttatttcttatagttgttgccaaaattatgtattt  19834800
                                                                                     <---------AHL20(2)
                                                                                 <---------YAB1
                                                                               <---------AHL20(2)
      <----------DOF2                                                          --------->ATHB51
    ------>MYB83                                     <---------ZAT18           <---------ICU4
    ------>MYB46(1)                                  --------->WRKY38(1)       --------->AHL20(2)
   <---------ALFIN1                                  --------->WRKY12         <---------YAB1
  --------->MYB46(3)                       --------->TOE2(3)                  --------->ICU4
<-----------GT1                            <---------------AGL15           <---------YAB1
-----AHL20(2)                              --------------->AGL15         --------->YAB1
---->AHL20(2)                              --------->TOE1(3)             ----------->GT1
---->AHL20(1)                             ==========================================================
-----AHL20(1)                             ----------------->AGL3   --------->HSFB2a(2)
-----------GT1          <-----------GT1 <-----------GT1            <---------HSFB2a(2)<---------AHL20(2)
 
tattacccactttagatacctctaattttacataagtttcaatataccttatatagttgactctattgctctagaattgtaattattttttattttgcaa  19834900
                                         --------->AHL20(1)
                                      --------->AHL20(2)
                                    ------>ZmHOX2a(1)
                                   --------->TOE2(3)
                                --------->GLK1(2)
                                <---------ARR11(3)
                                --------->ARR14(2)                   --------->ANAC58
                                <---------ARR14(2)                   --------->ANAC58
                           --------->LBD16                           --------->ANAC46         <-----
                       <---------At5g28300                    --------->AHL20(1)              ------
                 <---------YAB1 --------->ARR11(3)            <---------AHL20(1)       --------->YAB1
                <---------AHL20(1) --------->TOE1(3)          --------->AHL20(2)       --------->AHL20(2)
   --------------->AGL15  --------->LBD16<---------AHL20(1)   <---------AHL20(2)    --------->YAB1
  ----------------->AGL2 <---------LBD16 <---------ARR11(3)   <---------ARR11(3)   <---------YAB1  =
  ==================================================================================================
  ----------------->AGL3<---------LBD16  --------->ARR11(3)   --------->ARR11(3) --------->YAB1    -
====================MADS_MADS ---------->TaMYB80 --------->AtLEC2  <-----------GT1 --------->ICU4<--
 
taagttccaatttcagcattatttttcaccgggaaaatccttaaaatattctatgcaaaatccaatatattcactccacatagataataataaaaaactt  19835000
        <------------CBF
       --------->ATHB51         <---------ZAT18
       --------->ATHB12         --------->ZAT18
       <--------ATHB1           <---------PCF2
       <---------ICU4        --------->ALFIN1
       -------->HAHB4       ------->MYC3
      <---------ATHB51      <-------MYC3
      --------->AHL20(2)   --------->O2
      --------->ICU4       <---------O2                --------->GLK1(2)
      <---------AHL20(2)   --------->TGA1a            <---------GLK1(2)
----------AGL15            <---------TGA1a  <---------AHL20(2)
--------->AGL15        <-----------------AGL1       --------->LBD16
=====================================bZIP_DOF      <---------HSFB2a(2)                            --
==========MADS_MADS    <----------------PIF3(2)    --------->HSFB2a(2)                           ---
--------->DOF2         ----------------->AGL1     <---------LBD16       <------------CBF         <--
-------YAB1           ------>NtERF2        --------->AHL20(2)         <-------TEIL        ----------
 
ataaaagaaataattgaagaaaggctgcccatgtgggcacttccaaataaatctccagaatcgatgcttcaaatacattggatgtttactaaacaacaca  19835100
                                       <---------ARR14(2)
                                       --------->GLK1(2)
                                       --------->ARR14(2)
                                      <---------GLK1(1)
                               ---------->DOF2        ------>ZmHOX2a(2)
                            --------->ANAC46         <------ZmHOX2a(2)
                           --------->MYB46(3)       <---------ARR14(2)
                          --------->ANAC58     --------->ARR14(2)
                          <-----------------AGL1    --------->ARR14(2)            <----------DOF2
        *TSS  <---------MYB52(2)      --------->GLK1(1)<----------DOF2          --------------->AGL15
------->CCA1(2)           --------->ANAC58 --------->LBD16           --------->ANAC58             --
------>ARR14(2)       <---------ALFIN1<---------HSFB2a(1)            --------->ANAC46     --------->GLK1(2)
-------ARR14(2)------->GAMYB----------->RAV1(1)<---------ARR14(2)    --------->ANAC58    <---------GLK1(2)
->RAV1(1)     --------->MYB46(3)  ----------->GT1   <---------ARR11(3)          <---------------AGL15
 
gatatgaacaaacttcaacaaacaaacacacccacaaaggaaaatccgaagacccgatctttgttataaaacacacaacttctctctttttagaatctct  19835200
                                                                                    ================HOX2a_HOX2a
                                                                                    ------>ZmHOX2a(2)
                                                                                  --------->ARR11(3)
                  <----------DOF2                                                 <---------ARR11(3)
           <-----------GT1                           <---------ANAC55(2)      --------->YAB1
          <-----------GT1                         <------ZmHOX2a(2)       --------->ATHB12
      <----------DOF2                            --------->ARR11(3)     <---------ANAC55(2)  <------ZmHOX2a(1)
-------->ID1  <----------DOF2          ---------->DOF2                  --------->ANAC55(2)<--------
 
tgtcttcttctttttaactttcttttgtaatctcttgtctgaaaaagaaatggatcatgtaagttcaagtgagttacttattgatgatcttcttgaggat  19835300
                                                               -------->P
                                                         --------->AGP1
                                                         <---------ARR11(3)
                                                         <---------GLK1(2)
                                                         --------->ARR11(3)
                                                         --------->ARR14(2)
                                                         <---------ARR14(2)
                                                        <---------At4g35610
                                                       ----------->ARR10
                                           --------->ARR11(3)------>ZmHOX2a(1)
                                         <---------TOE1(3) ------>ZmHOX2a(2)                  ------
                   <-----------GT1       <---------TOE2(3)<------ZmHOX2a(2)                   ------
     <----------DOF2           <---------HSFB2a(2) --------->WOX13(1)                       --------
-TOE2(3)--------->HSFB2a(2)   --------->ETT(2)  <-----------HVH21         <<<<<<<<<TBF1     <-------
 
tactggttctttgagaacttatttacaagaaggtcgagaggcttaaggtattgtcactcagatccttacccctcttcttcttctacttcgacttctcctg  19835400
                                  --------->HSFB2a(1)
                             <---------HSFB2a(2)
                             --------->HSFB2a(2)                                            ------>ZmHOX2a(2)
                             --------->HSFC1(1)                                            <--------
                        --------->HSFB2a(1)                                                ---------
                        <------MYB83                                                       <------ZmHOX2a(2)
                        <------MYB46(1)                                                   <---------ARR14(2)
                        <---------HSFB2a(1)        <----------DOF2                        <---------AGP1
                        <---------HSFC1(2)        ------>ZmHOX2a(2)                       <---------
              <---------ARR11(3)  <---------HSFB2a(1)                                     --------->ARR11(3)
              --------->ARR11(3)  --------->At4g35610                                    <---------CCA1(2)
          <-------TEIL  --------->HSFC1(2)       <------ZmHOX2a(2)                       <------NtERF2
--->LBD16--------->GLK1(2)   <---------HSFC1(1) --------->ARR11(3)   <---------------AGL15--------->ARR14(2)
>ZmHOX2a(1)   --------->ARR14(2)  --------->HSFC1(2)            <---------At4g35610      <---------ARR14(1)
--->RAV1(2)   <---------ARR14(2)  <---------HSFC1(2)     <---------ICU4             --------->DAG2
--LBD16 <---------ARR14(2)   >>>>>>>ZML2        <---------ARR11(3)   --------------->AGL15<---------ARR11(3)
 
aaaaaatgggagattcagatattgggaaggttctagaagcttccacagggcgatctttaatcagggcatcttctatagatagtagagaaggcggatctca  19835500
               --------->ARR14(2)
       <---------bZIP60(2)                                                                     -----
       <---------ANAC58                                                                     ------>ZmHOX2a(1)
     --------->MYB52(1)                                                                     <-------
    ----------->HVH21                                             <---------HSFB2a(2)       ========
  --------->At4g35610                                             --------->HSFB2a(2)      ---------
  <---------ZAT2                                                --------->AtLEC2           <--------
  --------->ZAT2                                              <---------ANAC58             <--------
  <---------At4g35610    --------->ICU4                       <---------ANAC58       --------->ARR14(2)
 ------->TEIL <---------MYB52(1)                       <---------ANAC46              <---------ARR14(2)
-GLK1(1)     <---------DEAR3(2)    <-------TEIL        <------MYB83               --------->ALFIN1
>GLK1(1)    <---------DEAR3(1) <---------TOE2(3)       <------MYB46(1)           <-------MYC3  <----
--ARR10<---------ANAC58---------->DOF2                --------->MYB59            ------->MYC3 <-----
 
gacgaagctgacgggccggttctctgaaaagattagggttcaagaacagagacaagttgggtcttccttgcagaagaaggaacatgtggttcttcctaaa  19835600
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AGI:  At1g53180.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15115.1)
Range:  from: 19835109    to: 19836563    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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