Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->MYB52(1)       ----------------->AGL3                        <---------AHL20(2)       ----------------->AGL2                   <---------YAB1    <---------MYB46(3)                       --------->GLK1(2)   <---------AtMYB61                         ------->TEIL   --------->ALFIN1                          --------->ARR14(2)                   >>>>>>>>>TBF1  <---------MYB52(1)          <---------YAB1 <---------ARR14(2)             <------ZmHOX2a(1) ------>MYB52(1)   ------>ZmHOX2a(2)      --------->ANAC55(2)            <------ZmHOX2a(1) ------ARR14(2)   <------ZmHOX2a(2)       <---------YAB1               --------->ALFIN1 ----->ARR14(2)  <---------ARR14(2)       <---------ANAC55(2)          ------------------------>ANAC81 ----->MYB52(1)  --------->ARR14(2) <---------YAB1  --------->AHL20(2)<------ZmHOX2a(1)       ------- >GT1  <-----------------AGL3----------------------->TaNAC69(2)    <------ZmHOX2a(1)  --------->GLK1(2)   aaccggtggtccataaacggatcgacttggttttgattttgattacgaatctgattaaatcggagattaggaggaggaggagaagaagaatcgatgggga  18761700                                      <------NtERF2                                      --------->ATERF1(1)                          ------>MYB83                                    <---------ANAC46                 --------->ARR14(2) ------>MYB46(1)                                   <------NtERF2                     <---------ARR14(2) ------>MYB83                                   --------->ATERF1(1)           --------->At4g35610  <---------MYB59                                   <---------LBD16               <---------LBD16   --------->MYB52(1)                             <---------ANAC58                    <---------At4g35610 --------->MYB46(3)                        <---------MYB46(3)                     <---------DEAR3(1)  ------>MYB46(1)                       <---------TOE2(2)                 <---------GLK1(2)       <---------MYB59                    --------->ANAC46<---------DEAR3(1)  --------->HSFC1(2)       <---------MYB46(2)                   <---------LBD16<---------RAP2.3(1)   <---------HSFC1(2)       <---------MYB52(2)               <------ZmHOX2a(1) <---------DEAR3(1)     --------->At4g35610     <---------ANAC55(2)          <----------DOF2    <---------ANAC58           <---------At4g35610    ------->TEIL      <---         <---------ANAC58 <---------ARR14(2)         <---------At4g35610  ---------->DOF2        <--- ---->GT1<---------ANAC58 --------->ARR14(2)         <---------ZAT2 <------NtERF2<---------MYB111(1)   aattagttttggctttaggaccacggaggttacgagcggcggagtcgtaagcgcgagcagcttcttcggcggaatcgaaagtacctaaccaaacacgagc  18761800                      <---------At4g35610                      --------->At4g35610                      <---------ZAT2                      --------->ZAT2                      ----------->RAV1(2)                  ------>ZmHOX2a(2)                 --------->GLK1(1)                 <---------GLK1(1)                 <------ZmHOX2a(2)                                                           --------                <---------AGP1                                                               <-------                <---------ARR11(3)                                                           ------>NtERF2                <-----------ARR10                                                            <-------                ------->TEIL                                  ------->TEIL                  <--------                <---------ARR14(2)                            --------->ARR14(2)            <--------                --------->ARR14(2)                       --------->At4g35610                ---------               <---------CCA1(2)                     --------->ANAC46                       <--------             --------->ANAC55(2)                     --------->ANAC58                       <--------             --------->ANAC55(1)                     --------->ANAC58             ------>ZmHOX2a(2)             --------->ANAC58                       --------->SPL7                <-------TEIL-------             --------->ANAC46 --------->HSFB2a(1) <---------SPL7                 <------ZmHOX2a(2)             <---------ANAC55(2)         <---------ARR11(3)   <---------ARR14(2)--------->AGP1<------NtERF2          <------ZmHOX2a(2)  <-----------ARR10    ------>ZmHOX2a(1)             <---------ARR14(2)    <---------AtLEC2<-----------RAV1(2)  --------->ARR11(3)   --------->GLK1(2) <---------GLK1(2)  -- <-----------GT1--------->ARR11(3)      ----------------------->TaNAC69(2)      --------->ARR14(2)--- -------DOF2 --------->ANAC58--------->ARR14(2)  <---------ANAC58       <----------DOF2    --------->RAP2.6(3) ------DAG2 <---------LBD16  <---------ARR14(2)  <---------ANAC58   --------->GLK1(1)<---------MYB52(1)   ttttttccatggatcacggatctcagctgcgaatcgtccccaaggtctcttccttacgcctctgaatctgatttcttttacagatccgttgatggcggca  18761900                  <------NtERF2                 <---------RAP2.3(1)                 ------>NtERF2                 <---------ATERF1(1)                <---------O2                --------->O2                <---------RAP2.3(2)               --------->ATERF1(1)         <-------TEIL         --------->SPL7       <---------ARR14(2)       --------->ARR14(2)      <------MYB46(1)      <------MYB83<---------LBD16     <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------AtMYB61     --------->MYB111(1)     --------->MYB59     <---------MYB46(3)     --------->MYB46(2)    <---------MYB55(1)    <--------P <------NtERF2   <---------MYB52(1)  ----------->ARR10  <---------DEAR3(2) <------NtERF2 ->RAP2.6(2)  ------>NtERF2 --ATERF1(1)  <---------ATERF1(1) --RAP2.3(1) --------->DEAR3(1) -RAP2.6(2)  ----------->HVH21                                                              ------>ZmHOX2a(2) -DEAR3(1)<---------DEAR3(1)                   <---------MYB46(3)                          <------ZmHOX2a(2) >ATERF1(2)--------->LBD16                    <---------AtMYB61                            --------->CCA1(2) -ATERF1(2)<---------ATERF1(1)              <---------ICU4                                --------->AGP1 -ANAC46 <---------LBD16                   <---------YAB1                                 <---------ARR11(3) -->ATERF1(1)<---------DEAR3(1)            --------->ICU4      --------->ANAC58           <---------AGP1 ----->GAMYB--------->ATERF1(1)         ------>ZmHOX2a(1)      --------->ANAC58       ---------->DOF2 ------>MYB46(3)<---------DEAR3(1) ------>ZmHOX2a(1)         ---------->DOF2--------->YAB1--------->ARR11(3)   acgacggtaggtccggcgacggcggaagagcctcttcctctcctcatgatggtggatttaagagaaagccagaggtaatggtaatggagaaagatctaat  18762000                                                         <------ZmHOX2a(1)                                                    <---------MYB46(3)                                                    --------->MYB55(2)                                                   --------->ALFIN1                              <---                  ---------->DOF2               --------->ALFIN1        <------ZmHOX2a(1)        ----          ---------->DOF2      --------->At4g35610 <---------ANAC46  --------->CCA1(2)        -------   <---------MYB46(3)       <------ZmHOX2a(1)   <---------AtMYB61   <---------ARR14(2)       --------   agagattgttgagaaagagagaaagagagaggaagatgaagatgagggagatggtgggaggaatggagaagataggaaactctctcttcaacacaaaaag  18762100                                                                 <------------CBF                                                               <---------AHL20(2)                                                               --------->AHL20(1)                                                               --------->AHL20(2)                                                               <---------AHL20(1)                                                              --------->AHL20(2)    ------>ZmHOX2a(1)                                         <---------AHL20(2) *TSS                    ---------->ID1                    <---------AHL20(2) ------ARR11(3)         <-----------GT1                    --------->AHL20(2)                  ------ ----->ARR11(3)  <----------DOF2                          --------->AHL20(2)                   ------ -->DAG2    <------------------------ANAC81             --------->YAB1                         <----- -->DOF2    <----------DOF2<----------DOF2             <---------AHL20(2)           <---------RVE1(1)   ctcttcctcttcttcttttctttttttttcttttttttttgtaatttcaaaatgtttttaataaataaattgttttttttgttgtgatattttgaaattt  18762200                                                                             <---------ALFIN1                                                                           --------->DEAR3(1)                                                                           ----------->RAV1(1)                                                                          <---------TCP20                                                                          --------->PCF2                                                                          --------->ANAC46                                                                         ------>NtERF2                                                                        <---------ATERF1(1)                        <---------MYB46(3)                              --------->ANAC46            <                       <---------YAB1                                   --------->ANAC58   -------->P                       <---------TOE2(3)              <---------HSFB2a(2)<------NtERF2     ------>MYB83                   --------->AHL20(1)                 --------->HSFB2a(2)<---------ATERF1(1)     <---                   --------->ARR11(3)             --------->At4g35610   --------->ANAC58   ------>MYB46(1)       <---------AHL20(2)                         <---------At4g35610   <---------ALFIN1--------->MYB46(3)       --------->AHL20(2)<-------GAMYB            --------->ZAT18      --------->DEAR3(1)--------->AtMYB61 <---------TOE2(3) <---------AHL20(1)             <---------ZAT18   --------->ANAC58   ------>MYB46(1) --->AHL20(2)      <---------AHL20(2)           <---------ZAT18     --------->ANAC58   ------>MYB83 < --->AHL20(1)     --------->ICU4                --------->ZAT18     --------->ANAC46  --------->ORA47(1) ----AHL20(2)----------->GT1 <---------YAB1     --------->ZAT14  <---------REM1(2)  --------->DEAR3(2)   tttaagaatttaaatttgtaatattttggttgtaatagtttttttttttgtgcgctctcgaatgctcttcacgcccgccccacaagaccgaccaactcgg  18762300                                                                                                    -          <-----------GT1             <<<<<<<<<TBF1                                                 -     --------->YAB1        ---------->ID1                                                   -------->ATHB1    <---------YAB1      <----------DOF2        <---------AHL20(2)                           <-------- ---------ANAC58      <------------------------ANAC81                                       --------- ------MYB52(1)<----------DOF2<---------MYB52(1)                                           --------->ICU4 ---------ANAC58   <----------DOF2<-----------GT1                                          <---------YAB1   tttcttatcattttgctctttcttttcttttcgttttttcttcttctgtttatttgttttgatcaaccgattttagagattacaaaacaaaccattattg  18762400                                                                                        --------->YAB1                                                                                        <---------ICU4                                                                                       --------->ICU4                                                                                       <-------------                                                                                       <---------YAB1                                                                                    <---------YAB1                                                        --------->ANAC58            --------->ICU4                                                        --------->ANAC58          --------->YAB1                                              <---------ARR11(3)               --------->YAB1 -------->ANAC58           <-----------GT1    <---------AHL20(1)    <---------GLK1(2)<---------ICU4 -------->ANAC58      --------->TOE2(3)       --------->AHL20(1)--------------->AGL15--------->YAB1 -ICU4                <---------DAG2          --------->AHL20(2)===================================== >ATHB51    <---------MYB46(3)        ------>ZmHOX2a(1) --------->AtLEC2   ---------->DOF2          -   tcaagctaaattggtggtcaataaccttttttctgttctcctagccaaaatattagtcatgcaattccaagattagcaaaagaataataataataagggt  18762500                                                                                          --------->LBD16                                                                                         ----------->GT1                                                                                         <---------ANAC46                                                                           <------ZmHOX2a(2)                                                       --------->AHL20(2) --------->ARR14(2)   --------->AHL20(2)            ------------>MYB.PH3(1)                  <---------ARR14(2)    -----   <---------AHL20(2)            --------->GLK1(2)     <---------AHL20(2) <-----------ARR10     ----- --AGL15           <-----------GT1          ----------->GT1              --------->At4g35610    ----- ==MADS_MADS     --------->AHL20(2)   <---------MYB52(1)          <-----------RAV1(1)  --------->MYB52(1) -------->YAB1   <---------AHL20(2) ----------->GT1   --------->AHL20(2) <---------At4g35610  -------   aagaataaaataaactcatttaaactattttagaaaatcggttattttgaaaaaaaaaaaattttgttttgttgcagatcaacacaaaataccgtagaaa  18762600  Previous    Next  AGI:  At1g50640.1    Description:  ATERF3/ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor. Identical to Ethylene-responsive transcription factor 3 (ERF3) [Arabidopsis Thaliana] (GB:O80339;GB:Q0WS49;GB:Q1LYT1); similar to ATERF-7/ATERF7/ERF7 (ETHYLINE RESPONSE FACTOR7), DNA binding / protein binding / transcription factor/ transcription repressor [Arabidopsis thaliana] (TAIR:AT3G20310.1); similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) (GB:Q9SXS8); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR01 Range:  from: 18760816    to: 18762101    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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