Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------HSFB2a(1)                  --------->TOE2(3)         <---------TOE1(2)                  --------->HSFB2a(1)            ----------->GT1         <---------TOE2(2)                  --------->HSFC1(2)            --------->DAG2    --------->MYB52(1)                      <---------HSFC1(2)           <---------ZAT14   ------>ZmHOX2a(1)                   --------->ANAC58                  ---------->DOF2 ----------GT1                         --------->ANAC58               ----------->GT1 ------AHL20(2)  <---------ZAT6---------->DOF2                        <---------ANAC46              <   ttatcctaacgcaggtatagtgtcaatttgatcaaaagcccaaggaaatttctctataagagagtgtttgtggagtaaagtaacatcaactaaacacaaa  18378600     ------>MYB46(1)     ------>MYB83                                                               <-------TEIL    --------->MYB52(1)                                                    <---------ZAT14<---------At4g35610   --------->DEAR3(1)   --------->HSFB2a(2)                           <---------------AtSPL3        <  --------->MYB46(3)    <---------HSFB2a(2)                           <---------------AtSPL8--------- -----------GT1      ------->TEIL <---------LBD16                  ---------->DOF2       --------->At4g35610   tttcaccaacgagaaacactctgaatctagaaactactcggaaaatagaaacatttgaaattttacagagaaagagtacagattcaattccagctaaaga  18378700                                                  <------NtERF2                                                 ------>NtERF2                                                <---------ANAC46                                               <------NtERF2                                              <---------ATERF1(1)                                              <---------RRTF1(1)                                              <---------RAP2.3(1)                                              <---------ERF1                                              <---------DEAR4(2)                                             --------->DEAR3(1)                                   <--                                             <---------O2                                       <----                                             <---------RAP2.3(2)                                <----                                             <---------RAP2.3(3)                               ------                                      <---------ZAT14                                          <-----                                 --------->ARR14(2)                                            <-----             --------->LBD16     <---------ARR14(2)                                            ------            <---------LBD16   <---------ANAC46------>NtERF2                                  <-------           <---------LBD16   <---------LBD16 <---------DEAR3(1)                             <--------     <-----------ARR10       <-------TEIL ----------->HVH21                           --------->ANAC58 ---------YAB1              --------->ALFIN1--------->ATERF1(1)    <---------ZAT14    --------->ANAC46 ->DOF2 ----------->HVH21 <---------HSFB2a(1)--------->O2 --------->CCA1(2)           --------->ANAC58   gtttgattatctcaccgggataagaagaaggtgcggattgtgtagcgacggcgcgaatagataagcgagagaactgtccattgagaccacgactcgcggc  18378800                                                                                      --------->DREB2C(2)                                                                                      ----------->HVH21                                                                                      --------->DEAR3(1)                                                                                      --------->At1g77200                                                                                     --------->ORA47(2)                                                                                     --------->DEAR3(2)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                    <---------ATERF1(1)                                                                                  <---------ABI4(2)                                                                              <------NtERF2                                                                              <---------SPL7                                                                              <---------ATERF1(1)                                                                            --------->ATERF1(1)                                                                          <---------SPL7                                                <---------HSFB2a(2)      <---------ANAC58                                                --------->HSFB2a(2)      <---------RAP2.3(2)                                           --------->At4g35610           <---------RAP2.6(2)       --                                           <---------At4g35610           <---------ANAC46          --                                           <---------HSFC1(2)       --------->HSFB2a(1)            --                                           --------->HSFC1(2)       <-----------RAV1(1)            --                                        <---------At4g35610    <------NtERF2<---------LBD16      <--- ----NtERF2                             --------->At4g35610   <---------ATERF1(1) <------NtERF2 <---- -----ANAC46                     --------->ATERF1(1)          --------->LBD16 --------->LBD16   ----- -----DEAR3(1)     <---------ANAC46     --------->ZAT2        ------>NtERF2 --------->SPL7------>NtERF2 >NtERF2         <-----------HVH21      <---------ZAT2       --------->DEAR3(1)--------->ATERF1(1)--- ----LBD16      --------->bZIP60(2)    --------->ANAC46      <---------ATERF1(2)  --------->ATERF1(1) -NtERF2   --------->ANAC58     <---------ATERF1(1)          --------->ATERF1(2) <---------ATERF1(1)< --->ATERF1(1)  --------->O2    <---------RAP2.6(3)          <---------DEAR3(1)<------NtERF2    ----- --DEAR3(1)--------->ANAC58    --------->RAP2.6(2)          <---------LBD16------>NtERF2 --------->DEAR3(1) -LBD16    --------->ANAC46    --------->DEAR3(1)       ---------->DOF2  <---------ANAC58----------->HVH21   ggagagtagtttcaagcctcgtcgtagaaatagccgtctcccagcagcttctagagtagaaagccggcgaatgttgcggccggaggcaccgacgacggtc  18378900           <----------ARF1             ---------->DOF2 <---------TOE2(3)                    <------NtERF2 --------->HVH21                    <---------ANAC46 ------->WRKY38(1)                 <------NtERF2 ------->WRKY12                    <---------LBD16 ------->WRKY45                --------->ZAT2 ----GAMYB <----------ID1      <---------ZAT2 -----MYB46(3)                 --------->At4g35610 ---->MYB55(2)  --------->ANAC58 --------->ALFIN1                                             ------- ------>DOF5.7(2)              <---------At4g35610                            <------ZmHOX2a(1)   <-- ---------DOF5.7(2)          --------->ZAT18--------->At4g35610       <---------AtMYB61     <-------- ---->MYB52(2)  --------->ANAC58--------->ATERF1(1)                 --------->MYB52(1)     --------->MYB52(1)   gttgacgatgagggagacaagtaagagcgagggagctggcggaaagagcggaagaagagagaggtcgaagtaatggtcgaggaacaagttaatgaccgga  18379000                      --------->LBD16                      ------>NtERF2                                                       -----------             --------->AHL20(1)                                                       <------MYB83             --------->ARR11(3)                                                       <---------DEAR3(2)             <---------AHL20(1)                                                      --------->MYB59        --------->LBD16                                                            <---------MYB52(1)      <---------LBD16--------->ANAC46             ----------->GT1                  <---------ARR14(2)     -------->P      <---------ETT(1)            *TSS                              --------->ARR14(2)     --------->MYB52(1)  ---------->DOF2 <------ZmHOX2a(1)                        <---------SPL7 -->LBD16    <---------ARR11(3)        <---------TOE1(3)                         <---------MYB46(3) -------AtLEC2      <---------LBD16    <---------TOE2(3)             <------ZmHOX2a(1)<------MYB46(1) -LBD16--------->HSFB2a(2)          <----------DOF2        ----------->HVH21---------->DOF2       <--   gcatggctaccggaatattttctccggcaaagactgtgcttaaggatgcgaatagtttaatccgaccgcgaggagttttaaagcggttcggttcgaaaat  18379100                                             <---------MYB52(1)                                         -------->P                                        --------->MYB52(1)                                        ------>MYB83                                        ------>MYB46(1)                                       ----------->HVH21          <-------TEIL                <---------MYB59      --------->ALFIN1                --------->AtMYB61                       --------->ATHB12      <---------AtMYB61               <---------MYB46(2)           --------->TOE2(3)    --------->LBD16                   <---------MYB111(1)   <------NtERF2    <---------ATHB12  <---------LBD16                     <---------MYB52(2)  --------------->AtSPL3 >GT1 <---------DEAR3(1)            ------->TEIL<------------CBF  <<<<<<<<<ARR2                 <---- -------AHL20(2)               <---------AtLEC2<---------MYB46(3) <<<<<<<<<ARR1            --------->CCA1(2)   ttaaaccggaggtgcaaatttcgaaatctatgtgtatggacctaaccggttattgatatggccgaacaatcttatacgaatgatttatcgaatatacagg  18379200                                                                                               <-----                                                                                            ---------                                                                                            <--------                                                                                          -------->ATHB1                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                         --------->AHL20(2)                                                                                         --------->ICU4                                                                              --------->AHL20(2)  <--                                                                              <---------AHL20(2)  <--                               --------->AHL20(2)                        <---------YAB1  <---------AHL20(2)                               <---------AHL20(2)                       <---------TOE2(3)<---------ATHB51                    --------->WOX13(1)                          --------->LBD16       --------->AHL20(2) --ZmHOX2a(1)  <---------At5g28300  --------->YAB1             --------->ANAC46    --------->YAB1----   agtttgatacacaaattcacagcaattagagattaaaatcataagttatttgtatgttcaactctccgaaatttgacgattaaaatcataaattattatt  18379300 ----YAB1 >ICU4        --------->AHL20(2) -YAB1    <---------YAB1<------ZmHOX2a(1)                             --------->YAB1 -------TOE2(3)     ---------->DOF2                                  <---------YAB1 -------TOE1(3)   <---------AHL20(2)                         <-------TEIL ------>DOF2 <---------YAB1       <---------At4g35610    <---------YAB1   aaagttaacaatatgattatataaaaggattatgtcatctaataccatacttgagcatcaagattcaacttatgataaactccaaaaacttctgcatcaa  18379400                                                                       <---------ALFIN1                                                                       --------->ZAT6              <-                   <---------TOE2(3)                             --------->At4g35610              ---                   <---------TOE1(3)                        --------->WOX13(1)                    ---                   <---------YAB1                         ------>ZmHOX2a(1)                       <--                 <---------ICU4                  ------>ZmHOX2a(1)--------->TOE2(3)  ----------->HVH21                 --------->YAB1              ------>ZmHOX2a(1)<---------ATHB12     <---------At4g35610                --------->ICU4           <---------ZAT18 --------->TOE2(3)    <----------DOF2     <--   tttcgaagcattttgagaattatggttatggagatggaagcagtgtccttcctcttcttcctcaatcacctcaacacttcctttccactgactcttctcc  18379500  Previous    Next  AGI:  At1g49630.1    Description:  ATPREP2; metalloendopeptidase. Identical to Presequence protease 2, chloroplast/mitochondrial precursor (PREP2) [Arabidopsis Thaliana] (GB:Q8VY06;GB:Q9FX91); similar to ATPREP1/ATZNMP (PRESEQUENCE PROTEASE 1), metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT3G19170.1); similar to hypothetical protein OsI_008851 [Oryza sativa (indica cultivar-group)] (GB:EAY87618.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47789.1); similar to hypothetical protein OsJ_008187 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24704.1); contains InterPro domain Peptidase M16, N-terminal; (InterPro:IPR011765); contains InterPro domain Peptida Range:  from: 18371262    to: 18379049    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g49640.1    Description:  hydrolase. similar to cell death associated protein-related [Arabidopsis thaliana] (TAIR:AT1G49650.1); similar to CXE carboxylesterase [Malus pumila] (GB:ABB89010.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) Range:  from: 18379206    to: 18380397    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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