Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <----------DOF2                          --------->ARR11(3)         --------->ICU4   <---------ARR11(3)                                                        <    <---------ZAT6        --------->ARR14(2)                                                       <-    ----------->GT1       <---------ARR14(2)                    --------->YAB1                     -- --->AHL20(1)             <---------ARR11(1)      --------->At5g28300                              -- ----AHL20(2)            <---------CCA1(2)       --------->TOE1(3)                                 -- --->AHL20(2)   <---------TOE2(3)             <-----------GT1  <---------ATHB12         --------->YAB1 -->AHL20(2)   ---------->DOF2      ----------->GT1   --------->ZAT6          ----------->GT1      <- ---AHL20(2)  <---------AHL20(2)--------->ATHB12 --------->TOE2(3)<-----------GT1      <---------ATHB12   attagagtgtaaaaatttaaagtatccatatctttgatttgtaattttaaaccgtaacagtacaaatgataccatttcaacagttacaaatcataaaaac  18345800                                                                                <-----------GT1                                                                            <---------MYB52(1)                                                                        --------->ARR14(2)                                                                       <---------CCA1(2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        ----------->GT1                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ---------->DOF2              <---------DAG2                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----------HVH21--------->DAG2  <----------DOF2                    --------->LBD16 --------bZIP60(1)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->LBD16                 --- ------->bZIP60(1)  ----------->GT1       <---------ZAT6          <---------LBD16                 <-- ------->O2     ---------->DOF2<---------At4g35610            <xxxxxxxxxxxxxxxxsmallRNA(i)        --- ------->bZIP60(2)  <---------ZAT6  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ARR14(2)------>ZmHOX2a(1) --------O2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  >>>>>>   gacgtcaaaagcgttactaaaagtgttattctcagctttttgtactgttatcggtttaatcttcaaaccgcgcatatcgttttttctatctcctaagaaa  18345900                                <---------TOE1(3)                           ------>MYB46(1)                           ------>MYB83                          --------->WOX13(1)                        --------->MYB46(3)                        <---------ATHB12                       --------->ANAC58         <----------DOF2<---------MYB55(2)      --------->ANAC58 -------->P <------ZmHOX2a(1)      --------->ANAC58--------->MYB55(1)     <---------ZAT18 <---------MYB111(1)   <---------SPL7    <---------MYB46(2) <---------------AtSPL3------>MYB46(1) --------------->AtSPL8------>MYB83 <---------------AtSPL8--------->ANAC58           --------->ZAT2 ------>AHL20(1)     --------->MYB46(3)           <---------ZAT2                <------MYB83 -------AHL20(1)     <---------MYB111(2) --------->AHL20(2)                     <------MYB46(1) ------>ARR11(3)  <-----------GT1----------->GT1  --------->At4g35610          --------->MYB59 >>>>GT-3b    <---------YAB1    <---------TOE2(3) <---------At4g35610          --------->MYB46(2)   aatattgtacgcttttatgtttaccaaccaatctaaggaaaaaaaaaatcggagctgaaaacattgagaaaaatcacgagtttggtatgagttagagaat  18346000                                                                            --------->MYB52(1)                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                      ----------->HVH21                                                                    --------->ANAC55(2)                                                                    <---------ANAC55(2)                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                   <-------TEIL                                                                  --------->ARR14(1)                   --------->At5g28300                            --------->CCA1(2)          ----------->GT1                                        --------->ARR14(2)             >>>>>        <---------ANAC46                         --------->ICU4  <---------ARR14(2)           ------- <---------WRKY38(1)                        ----------->GT1      --------->ARR11(1)           <------ <---------WRKY12 ----------->GT1          ----------->GT1      --------->CCA1(2)            --------   gagtcaactcgcgagtaaaactgtaaaattcaaaaacagagcaaatgggtaaaaatggaatttgagagatacgcgacgaaacgaagagttttgtgatatc  18346100                           --------->HSFC1(2)                           --------->HSFB2a(1)                           <---------HSFC1(2)                           <---------HSFB2a(1)                          <---------ARR14(2)                          --------->ARR14(2)                          --------->GLK1(2)    ----------->GT1       <---------ARR11(3)      --------->WOX13(1) ---------->DOF2   --------->ANAC46      ------>ZmHOX2a(1) >>>>RAP2.2        --------->ANAC58 <----------DOF2   --------->WOX13(1)      ---------->DOF2 -->ARR11(3)       --------->ANAC58<---------ANAC58 <---------ATHB12        --------->HSFB2a(2) ---ARR11(3)--------->ANAC46       <---------ANAC58 ------------>CBF        <---------HSFB2a(2) ->GLK1(1)<-----------GT1<---------GLK1(2)      ------------>CBF <----------DOF2             <-------   taaaaaagattaaaaccccacaagacagaatcttctagctttcctcttccttcaatcaatcttctctctttctctcttccaaaagattccacaaacattg  18346200                                       <---------At4g35610                                       --------->At4g35610                                  --------->GLK1(1)                                 --------->ARR11(3)                                 <-----------ARR10                                 <---------ARR14(2)                                 <---------ARR11(3)                                 --------->ARR14(2)                                 <---------AGP1                                                   <--                      *TSS      <---------CCA1(2)                                         <---------MYB46(3)                 <---------AHL20(2)------>ZmHOX2a(2)             <---------YAB1         <-------GAMYB -----CBF       --------->AHL20(2)<------ZmHOX2a(2)   <<<<<<<<<TBF1<---------GLK1(2)   <-----------RAV1(1)   ttctctctccctctaatataaaatcgcttcacacagatctcatctcaagttgtttcttcttcacactctgattctcttactatttgactctgttgttgtt  18346300                                              --------->LBD16                                             <---------HSFB2a(2)                                             <---------HSFC1(1)                                             --------->HSFB2a(2)                                            <---------LBD16                                          --------->GLK1(2)                           <---------AHL20(2)                                <------ZmHOX2a(2)                                    --------->YAB1                       <------MYB83--------->AtLEC2                             --------->AHL20(2)          --------->GLK1(1)    --------->ARR11(3)  --------->DAG2           ----------->GT1          <---------bZIP60(1)  <---------ARR11(3) ---------->DOF2          <---------HSFB2a(2) <---------YAB1        <------MYB46(1)   <---------GLK1(2)                ----------->GT1        <--- -------YAB1         --------->ALFIN1----------------->AGL1     <---------AHL20(2)  --------->AHL20(2)   gttattgttgtgatatcaagagagtgggtttgagatcatgccaaattctggaaaaagtttgagtttttaattcgaatcgagaaaaaataaaaatgggttc  18346400                                                             <-------GAMYB                                                            <---------DEAR3(2)                                                            <---------MYB46(3)                                                            --------->MYB55(2)                                        --------->HSFC1(2) <---------RAP2.6(2)                                        <---------HSFB2a(1)<---------ANAC58                                      <------ZmHOX2a(1)    <---------ANAC46                           ------>ZmHOX2a(2)               <---------ANAC58                           ==================HOX2a_HOX2a   <---------DEAR3(1)                         <---------ARR11(3)           <-----------RAV1(1)                         --------->ARR11(3)        <-----------RAV1(1)         --------->At4g35610<----------DOF2       ------->TEIL     ---------->DOF2 --------->ANAC55(2)   ------>ZmHOX2a(2)<---------HSFC1(2) <---------DREB2C(2) -------DOF2           ======================HOX2a_HOX2a--------->ALFIN1      ------->TEIL   tttaggtgatgagcttagtttgggatcgatctttgggagaggagtttcgatgaatgttgtggcggttgagaaagttgatgaacatgttaagaagcttgaa  18346500                                                                   <---------MYB46(3)                                                                   --------->MYB52(2)                                                                  <-------TEIL <---------WOX13(1)                                                               --------->HSFB2a(1)                                                               <---------HSFC1(2)                                                               <---------HSFB2a(1)  ------>ZmHOX2a(2)                                                   <---------GLK1(2)<-------GAMYB   =============HOX2a_HOX2a                                                   --------->ARR11(3)        --------->ATHB12                                                   --------->ARR14(2)       <---------YAB1         --                                            <----------DOF2    <---------MYB46(3) <---------ARR11(3)                                      ------>ZmHOX2a(1)        --------->HSFC1(2) --------->ARR11(3)                ---------->DOF2 --------->At4g35610<---------ARR11(3)<---------MYB52(1)   ------>ZmHOX2a(1)        ---------->DOF2         <---------At4g35610<---------ARR14(2)---------->ID1 =================   gaagagaagagaaagctcgaaagttgtcaacttgagcttcctctgtctttgcagattttaaacgatggttcgttgtttttgattgatctctcctctgttt  18346600                      <---------ANAC46                     <---------At4g35610                     --------->At4g35610                    <---------MYB46(3)                   <--------P                  <---------ANAC58           <--------HAHB4           --------->ATHB12           <---------ICU4                                          <------ZmHOX2a(1)          <---------ATHB12                                    ----------->HVH21        <-----------GT1                                    --------->ARR14(2)       <---------AHL20(2)                                  ------->TEIL    --------->ARR11(3) ---->ZmHOX2a(1)  <---------ANAC58                         <---------ARR14(2)                    ---- =====HOX2a_HOX2a <-------GAMYB   ---------->ID1          <---------CCA1(2)<---------ARR11(3)    <---   cctctgtttttaatcatttgggttgctgaaagttttgttttttttgtttgcagcgattttgtatctgaaggataagagatgttcagagatggagactcaa  18346700  Previous    Next  AGI:  At1g49560.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G68670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47756.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 18346222    to: 18348031    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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