Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <----------DOF2                                             <---------GLK1(2)                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                   --------->ARR14(2)                                     --------->ARR14(2)                                   --------->GLK1(1)                                     <---------ARR11(3)                                   <---------GLK1(1)                                     --------->ARR11(3)                                   <---------ARR14(2)             ------>ZmHOX2a(2)       <---------AGP1                                   <---------HSFB2a(2)            <------ZmHOX2a(2)        <---------ARR14(2)                             ------>ZmHOX2a(1)           <---------ARR11(3)        --------->AGP1                            <---------ANAC58  <---           --------->ARR11(3)       <---------CCA1(2)                   --------->YAB1--------->HSFB2a(2)       --------->MYB52(1)          ----------->ARR10    ----------->RAV1(1)    <---------ANAC58 -----   ctgaaaaaaaaacgatctcgtcgaagaaaacatgaattagatcttcaaattctttgagcaacacaaattcaaaatcagaatgcgtcctcgagaattctcc  17378100                                                                                 <---------HSFB2a(2)                                                                                 --------->HSFB2a(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                            <---------ATHB12                                                                        --------->YAB1                                                                       <---------ATHB12                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                     --------->WOX13(1)            <-      --------->LBD16                      <---------LBD16        --------->ANAC58            -------     <---------ANAC46                    --------->GLK1(2)        --------->ANAC46            -------    <---------LBD16                  ----------------->AGL1     --------->MYB52(1)     ----------->GT1 --------HVH21                  --------->DAG2                <---------MYB52(2)------>ZmHOX2a(2)<--- ---->ANAC46    ----------->GT1---------->DOF2  <---------KAN4(2) --------->ANAC58   <---------GLK1(1)   gtcgctcgcggataaatccagtgaaaacatataaaaagttcaaaatcgggaatgaacacaaaaaacaaacgcaatcaaatgatctggaaatgtgaaacgc  17378200                                           --------->YAB1 --------GLK1(2)                          <---------YAB1 -->ANAC58                             --------->ARR14(2) -->ANAC58 ---------->DOF2             <---------ARR14(2)          --------->YAB1 ------TOE2(2)    ----------->GT1 --------->GLK1(2)       ----------->ARR10          --------->YAB1   agattatctcatcgaaagaagcgataaaactctaagaatcgaatatgatcacatcgagcgaagaaacgataacaatgggggaaggaagaataagagaaga  17378300                                          ==================================HOX2a_HOX2a                                          <------ZmHOX2a(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                              ----------->RAV1(1)                              ------>NtERF2                             --------->ETT(2)                             ----------->HVH21                                                    ---                            --------->RAP2.3(1)                                                   ---             <---------ARR14(2)          <---------ARR14(2)                                      <---             --------->ARR14(2)<------NtERF2                                                    <----     <---------YAB1         <------NtERF2--------->ARR14(2)                                   <------   <---------DOF5.7(2)     <---------RAP2.3(1)                       <------ZmHOX2a(1)  <------ZmHOX2a(2)  <---------ARR14(2)       <---------ATERF1(1)                --------->CCA1(2) <---------At4g35610  --------->ARR14(2)       <---------DEAR4(2)                <----------ID1  <-------TEIL     ------- --------->DOF5.7(2)      <---------DEAR3(1)      ---------->DOF2    ==========================HOX2a_HOX2a   agcgtttacgatttggatttgcaattagacggcgacagaagaagatcgacgattaagcgaagagagacgaaggagacgattcatcttccgatcgaaattc  17378400                                                              ---------->DOF2       <---------HSFC1(2)      ----------->GT1                                      --------->ANAC58         <---------HSFB2a(1)     --------->ALFIN1            <---------SPL7            --------->ANAC46         --------->HSFB2a(1)   <---------ANAC46          ------->GAMYB                 --------->ANAC58         --------->HSFC1(2) ------>LBD16               --------->MYB46(3)            <---------LBD16         <------ZmHOX2a(1) --->NtERF2                 <---------MYB55(2)            >>>>>>>>>>AtSR1     --------->ALFIN1 ------LBD16               <---------At4g35610         ---------->DOF2      <------MYB46(1) -----LBD16         <---------MYB46(3)                <---------ARR14(2)    <------MYB83 ---ARR14(2)      <---------MYB52(1)             ----------->GT1      <------ZmHOX2a(1) -->GLK1(2)   <<<<<<<<<<<<<<<<<LFY   <------ZmHOX2a(1)--------->ARR14(2) <------ZmHOX2a(1) <---------   cggcgaagtggagaaatgccattggtttcaacagccgtaggagagagagaagagagaaaacgcgcaaagagaggaggaaggtgaggaggttctctttctt  17378500                                                        --------->AHL20(2)                                                       --------->YAB1                     -----------                                                      --------->AHL20(2)             --------->HSFB2a(2)                                                    --------->YAB1                   <---------HSFB2a(2)                            <------------CBF      --------->AHL20(2)              <---------MYB52(1)                          <---------YAB1         --------->AHL20(2)             --------->DEAR3(1)               *TSS---------->ID1          --------->ANAC55(2)                ------>NtERF2     -----            --------->AHL20(2)             <---------ANAC55(2)----------->TBP --------->LBD16   -----            <---------AHL20(2)             ----------->GT1--------->AHL20(2)<---------LBD16    ------ -DOF2  <----------DOF2   <---------AHL20(2)     --------->YAB1     --------->AHL20(2)--------->ANAC46   ctctctgtctctttttaatttgtttttttttattgtttgtttattaagtaataaaaataaaaatataaaaaaaaatgttccgccgttctcgcagcaataa  17378600                                                                 --------->ZAT2                                                                 ----------->RAV1(2)                                                              <---------ETT(2)                                                              --------->ETT(2)                                                          --------->ALFIN1                                                         ------->MYC2                                                         <-------MYC2                                                         <-------PIF5                                                        <---------TGA1a                                                        <---------ANAC46                                                        --------->TGA1a                                                        <---------O2                           --------->ATHB12             --------->O2   <----------DOF2                          <---------YAB1                <---------ANAC55(2)                        ------>NtERF2                   --------->ANAC55(2)      <---------YAB1    --------->At4g35610             <---------bZIP60(2)<-----------GT1    <------      <---------ANAC55(1)<------NtERF2                  ==========================bZIP_DOF<---------LBD16   <---------MYB52(1)   <---------At4g35610            ------------>OsbHLH66        <---------ALFIN1 ->CBF<---------ANAC46 <---------DEAR3(1)<---------ANAC46------->MYC3 <---------ANAC58 --------->ARR14(2) ---->ANAC58         <---------RAP2.3(1) <---------ANAC58<-------MYC3 <---------ANAC46 <---------ARR14(2) ---->ANAC58        <---------DEAR3(1)   <---------ANAC58------->PIF5 <---------ANAC58<---------CCA1(2) --->YAB1      <---------YAB1<---------WOX13(1)     <-----------------PIF3(1)      --------->LBD16   gcaccgttatgtgtgtttttattcggcgctgattgaaacgctgtcgtattcagttctcacgtggtcgacctggcttttaacatcccccaaatctcggatt  17378700                                <---------------AtSPL8                           --------->ANAC55(2)                           --------->ANAC46                           <---------ANAC55(2)                         ------>ZmHOX2a(2)                    --------->ANAC58                                 --------->ARR14(2)                    --------->ANAC58 <----------ID1                  <---------ARR14(2)                    --------->ANAC46 --------->ANAC58                <---------ARR11(3)           <--                  <---------ALFIN1   --------->ANAC58                --------->ARR11(3)           <--                  --------->ANAC46  --------->SPL7---------->DOF2    <---------AGP1               <--                 ------->GAMYB  <---------------AtSPL3              <---------CCA1(2)       <-------- ---GLK1(2)     <---------ALFIN1--------------->AtSPL3        <---------YAB1             <---------AHL20(2)   atcaacaccaaaaattcaacacaccccatacgtagtagtacgacaaaaaaaaaaaagactatttatacttggatcttgaaatgtattctatttttatgtt  17378800                                                                                             <-------                                                                                             <-------                                                                                         --------->ARR11(3)                                                                                         --------->AHL20(1)                                                                                         <---------ARR11(3)                                                                                    --------->LBD16                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC55(2)                                                                                  ------>ZmHOX2a(2)                                                                                  <---------LBD16                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)          <---------AHL20(2)                                                   <------ZmHOX2a(1)          --------->AHL20(2)                         <------ZmHOX2a(1)        ----------->ARR10  <---          <---------AHL20(1)        <---------ARR14(2)                    ==============HOX2a_HOX2a    <-----------GT1          <---------ANAC58        ===================================HOX2a_HOX2a -------YAB1                 <---------ANAC58--------->ANAC58             ===============HOX2a_HOX2a -------TOE1(3)     <-----------GT1 --------->ARR14(2)                    <------ZmHOX2a(1)  <------- -------TOE2(3)--------->ATHB12----------->GT1       ====================================HOX2a_HOX2a -TOE2(3) --------->AHL20(1) <-------GAMYB   --------->ANAC58            <---------YAB1  <---------AHL20(1)   atggttttacaataaattgatttcacatttgggttgtgaattctcacaagaattaggagtttatagagagagattaggataggatccgcaatatatcgtg  17378900                                                                                 <---------HSFB2a(2)                                                                             <---------GLK1(2)                                                                            <--------ATHB1                                                                            <---------ICU4       <---------AHL20(1)                                                   -------->HAHB4       --------->AHL20(2)                                                  --------->ICU4       <---------AHL20(2)                              ---------->ID1      <---------YAB1    --------->AHL20(2)                                <-------GAMYB        <---------ATHB12    --------->AHL20(1)                               --------->MYB52(2)   <---------TOE2(3)    <---------AHL20(1)       <---------AHL20(2)      <---------MYB46(3)  --------->YAB1 --ANAC58               <---------YAB1<---------AHL20(2)               <---------YAB1               < --ANAC58              --------->AHL20(2)        --------->ICU4        <---------WOX13(1)          <- --------HVH21<---------YAB1--------->AHL20(2)   <---------YAB1     --------->ICU4                 <- --ANAC46    <---------TOE2(3)     ------->TEIL <---------TOE2(3)   <---------YAB1               <---   gtcaaatattttatttatgtttgatttttataaaatgaatttttatgtataatgtttgttgttatttgtgttgattaatgattctcgataattttgttta  17379000  Previous    Next  AGI:  At1g47380.1    Description:  protein phosphatase 2C-related / PP2C-related. similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT1G68410.2); similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT1G68410.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78409.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61328.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 17374977    to: 17378515    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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