Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------------->AtSPL8          <---------MYB52(1)     ------>ZmHOX2a(1)                                                    <----------DOF2--------->ARR11(3)   ------>ZmHOX2a(2)                          <-------TEIL            --------->O2       <---------ARR11(3) ---->ZmHOX2a(1)        --------->TOE2(3)---------->DOF2              <---------O2 ----------->GT1 ------->RAV1(2)      ------->TEIL  <----------DOF2           --------->AHL20(2) <---------ANAC46   cctgatccttctgttttgtacatgaaccttgattcagtcttttaaaagttcatgttcaatctttttatatagacgtctttgtaatgtgtaatatcatctc  17328600                                                                                              <------                                          <----------DOF2                                     -------                            --------->AHL20(2)                                                <------              <-----------GT1            <---------DAG2                         <---------AHL20(2)           --------------->AtSPL8     <---------ALFIN1                          <-----------GT1           <---------------AtSPL8<-----------GT1                     <---------GLK1(2)    <---------ANAC55(2)       ------->TEIL         <---------AHL20(2)                  --------->TOE2(3)        <-------TEIL   tgtatcatggatgtttgtacaatatttcatataaataacaacaccttttggcaaaaaaaaaaacaacatcaaattcttgtatttacttagttacatataa  17328700                               ----------->GT1                               <---------ANAC55(2)                               --------->ANAC55(2)                               --------->ANAC55(1)                               --------->ANAC46                 <---------AHL20(2)                 <---------AHL20(1)           --------->ANAC46    --------->ANAC58  --------->AHL20(2)      >>>>>>>>>MYB98           --------->ANAC58  <---------AHL20(2)    <-----------GT1           <-------TEIL      <---------YAB1                --------->AHL20(2) ----   --------->AHL20(2)   ----------->RAV1(2)  --------->ICU4       <-----------GT1               <---- ---AHL20(2)     --------->AHL20(2)          <---------YAB1      --------->AHL20(2)            ------ -->AHL20(2)     --------->AHL20(1) --------->ICU4<---------AHL20(2)         <---------AHL20(2)<----- ---YAB1  <-------TEIL<-----------GT1     <---------YAB1<----------DOF2     --------->AHL20(2)-------   ttcaatttaacatacacaataaaataacctgatacgtaatatttcttattattaatttctttgtaaatttactaaaaatttaaaatacaccttcaaatat  17328800                  <---------AHL20(2)                 --------->AHL20(2)                 <---------AHL20(2)                      --------->ANAC58                 <---------AHL20(1)                      --------->ANAC58    <---------ANAC58                                     ----------->GT1    <---------ANAC58                              ===================================================    <---------ANAC46                              --------------->AGL15 ----->YAB1 <---------ATHB12                 <-----------GT1                --------->AHL20(2) -----YAB1  --------->AHL20(2)              --------->AHL20(2) --------->YAB1<---------AHL20(2) --->ARR11(3)<---------AHL20(2)         <---------YAB1  --------->DAG2 --------->At4g35610 ----ARR11(3)--------->AHL20(2)       ----------->GT1  ---------->DOF2 <---------At4g35610       ---- -->YAB1  --------->WOX13(1)--------->AHL20(2) --------->ZAT6 --------->ICU4<---------ATHB12   ------   catatttcgtgccaattaataaaattttaaaaaaatccagttgtaattaactctcaaaaaagcaaaaattatcagctaataaatagttttacaaaaaaaa  17328900                                                                        <---------AHL20(2)                                                      <----------DOF2   --------->AHL20(2)  ------>ZmHOX2a(1) <---------ICU4             <----------CDC5       <---------ICU4  <---------------AGL15                     ------>NtERF2 <-----------GT1 ---------->DOF2  --------------->AGL15 ------------>CBF    --------->LBD16 <---------ANAC58 =================MADS_MADS<------------CBF--------->DEAR3(1)    <-----------GT1 ----->RVE1(1)  <-----------GT1           --------->ATERF1(1) <---------MYB52(1)                *TSS< --->AHL20(2)  --------->AHL20(2)        --------->At4g35610<---------ANAC58                  <------   aatcctattttgagtaatttactaatttcaattgaaaaacatgagccgcgcttagtctttttccgttttactaattaaaagaaaaaaacccatctgtctt  17329000                                                                                     <------NtERF2                                                                                    ----------->RAV1(1)                               --------->ARR14(2)                                   ------>NtERF2                               <---------MYB52(1)                                  ----------->HVH21                              --------->At5g28300                                  --------->ETT(2)                             <---------MYB46(3)                                   --------->RAP2.3(1)                            <---------ANAC58                                      <------NtERF2                            <---------RAP2.6(2)                                  <---------ATERF1(1)                            <---------ANAC58                                     ------>NtERF2                            <---------TOE2(3)                                    <---------RAP2.3(1)                       -------->ATHB1                                           <---------DEAR3(1)                       --------->ATHB12                                        --------->RAP2.6(3)                       <---------ICU4                                        <---------O2                      --------->ICU4                                         --------->TGA1a     <---                      <---------ATHB12                                       --------->O2        <---                  <------------------ATHB9                                   ========================                 --------->ANAC46                                            ----------->HVH21   ----                --------->HSFB2a(2)                                          <---------TGA1a---------                <---------HSFB2a(2)                                          --------->ANAC46------->GAMYB                --------->LBD16<---------ARR14(2)    ------>ZmHOX2a(1)  --------->At4g35610 ---------             ------>ZmHOX2a(1)<-------GAMYB      ------>ZmHOX2a(1)      <---------At4g35610--------->RAP2.6(3)       <<<<<<<<<TBF1  <---------YAB1  <---------ANAC46       <---------LBD16 ======================== ----------DOF2 ------>ZmHOX2a(1)  <-----------RAV1(1)    ------>ZmHOX2a(1)  ========================MYC_MYB ------------------ANAC81   <---------ANAC46  ------>ZmHOX2a(1)         --------->ZAT2    --------->MYB52(1)   ctctttttcttcttcctcctcgaaatcattgcggttactgtcgtcttcctccttcctctcctcttcggaatcgaagctcacgacggcgacagtaacggca  17329100                <---------MYB46(3)               <---------AtMYB61               <---------MYB46(3)              <--------P            <-----------RAV1(1)          <------MYB46(1)      <-----------RAV1(1)      --------->ALFIN1   <---------AtMYB61 ---NtERF2<------MYB83<-------TEIL                        --------->AHL20(2) ------At4g35610<------MYB83                              <---------AHL20(2) ================MYC_MYB                  --------->HSFB2a(2) ----->At4g35610<------MYB46(1)           <---------HSFB2a(2)                                <<<<<<<< >ANAC58 <---------AtMYB61                <---------HSFC1(1)                           <<<<<<<<<TBF1 >ANAC58<--------P <---------MYB46(3)     --------->HSFC1(1)                       <-----------GT1 ================MYC_MYB    <-----------GT1            <----------DOF2  ------>ZmHOX2a(1) <<<<<<<<<TBF1   tcggagaggtgttggtgttggtggttcatttaacttaacattttcgagaagagaaggcttttaatttcaaattcctcgctgaatttttcttcttcttctt  17329200                                                                                             <-------                                                                                             <-------                                                                                             --------                                                 <---------AHL20(2)                         <--------                                                 <---------YAB1                     ----------->GT1                                                <---------AHL20(1)                  <------MYB46(1)                                                --------->AHL20(1)                  <------MYB83                   --------->GLK1(2)            --------->AHL20(2)              <-----------RAV1(1)               >>>>>>>>>TBF1                   --------->YAB1                   <---------MYB46(3)     --------->At4g35610                --------->At4g35610            <-----------RAV1(1)  ---------     <---------At4g35610             --------->At4g35610 <---------ANAC58    <----------DOF2<-------- <TBF1      >>>>>>>>>TBF1            <---------At4g35610 <---------ANAC58---------->ID1   --------->YAB1   cgtcttcatcggaagaagaagaatccaaaaacttatctcatctgcagaaatataattgtgcttccccatggatttgtcgcttttgttggtaacaataatt  17329300                                                                                   <-------TEIL                                                                                  <------ZmHOX2a(2)                                                                         ---------->DOF2                                                                       <------NtERF2                                                              --------->ARR11(3) <---------ARR14(2)                                                              <---------ARR11(3) --------->ARR14(2)                                                            --------->ANAC58   --------->LBD16 <------------------------ANAC81                --------->HSFB2a(2)   --------->LBD16 -ATHB1                                         <---------HSFB2a(2)  <---------ANAC46 --ICU4              <---------HSFB2a(2)        <---------HSFC1(1)   --------->ETT(1)      <--------- ->YAB1              --------->HSFB2a(2)        --------->HSFC1(1)  <---------LBD16------>ZmHOX2a(2) -ATHB12         <---------CCA1(2)          <----------DOF2 --------->ANAC46  --------->RAP2.6(2)---- >ICU4------>ZmHOX2a(1)               <---------AHL20(2)    --------->ANAC58 <---------LBD16     <--- -ATHB51  <----------DOF2         <---------AHL20(2)     <---------REM1(2) --------->GLK1(2)   ------   ctctcttcctctctttctcgtttctcgatgttttgtttatttaaaactttctcgaactcttcacgatattgccggagaagccggatccatgctcttttca  17329400                                                                                                 ----                                                                                                 <---                                                                                            ---------                                                                                         <---------At4g35610                                                                                         <---------ZAT2     <---------ANAC58                                                                    --------->At4g35610     <---------ANAC58                                           <----------DOF2          --------->ZAT2   <-----------GT1                                           <-----------GT1       --------->MYB52(1) -DOF2<----------DOF2                                  <---------MYB52(1)  --------->At4g35610   ---- ----->ICU4                   <----------DOF2         <-------GAMYB      --------->YAB1 <---------ARR14(2) ------YAB1         ---------->DOF2   <---------ARR14(2)   <---------WOX13(1) --------->At4g35610<--- --->YAB1      <---------ATHB12  ----------->GT1     <-----------RAV1(1) <---------ICU4 --------->ARR14(2)   tgattttgctttctccaatgaataaagtttctctttggtgaatactgagacatttctgttgatttactttgttcatcatcagccaaaacggagctgggaa  17329500  Previous    Next  AGI:  At1g47270.1    Description:  AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor. Identical to Tubby-like F-box protein 6 (TULP6) [Arabidopsis Thaliana] (GB:Q0WPY0;GB:Q9C6B4); similar to AtTLP2 (TUBBY LIKE PROTEIN 2), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT2G18280.1); similar to AtTLP2 (TUBBY LIKE PROTEIN 2), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT2G18280.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61143.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 17328996    to: 17331168    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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