Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ARR14(2)                          -------->ATHB1                          --------->AHL20(2)                          <--------HAHB4                          <---------AHL20(2)                          --------->ATHB51                          --------->YAB1                          <---------ICU4       <----------DOF2                           ---------->DOF2 ------->AHL20(2)        <---------ATHB51      --------->TOE2(3)                  <---------YAB1 --------AHL20(2)        --------->ICU4--------->ARR14(2)               --------->ARR11(3) ---->AHL20(2)           <---------ATHB12   <-----------GT1             <---------ARR11(3) -----AHL20(2)       <---------MYB59  <---------CCA1(2)                --------->YAB1    --------->MYB52(1) ----AHL20(2)       --------->ANAC46<---------ANAC58         ------->MYC3   --------->AHL20(2) ----AHL20(1)       --------->ANAC58<---------ANAC58         --------->TOE1(2) <---------YAB1 --->AHL20(2)       --------->ANAC58<---------ANAC46         <-------MYC3   --------->ICU4   <------ZmHOX2a(1) >WOX13(1)  ----------->GT1 <---------YAB1  <---------AHL20(2)----------->GT1<---------AHL20(2)  ----   atttataaacaaaatagaaaatacccaattatttttgtgcgtatattaactttagaaggaaaacgtgtgaaaatgatatttattattaaaccaaaggact  11827000                                                     --------->WOX13(1)    <---------MYB52(1)                                                     --------->YAB1      <---------ANAC58                                                   <---------YAB1        <---------ANAC58                                                  --------->TOE2(3)      <---------ANAC55(2)                                                 --------->YAB1          --------->ANAC55(2)                                                 <---------ICU4        <-----------GT1                                       --------->ANAC55(2)          <---------ICU4                                       <---------ANAC58             <--------ATHB1                                       <---------ANAC46             --------->ATHB51             <---                                       <---------ANAC55(2)          <--------HAHB4              <----                          --------->DAG2         --------->ATHB12   --------->YAB1              -----                         ---------->DOF2 ----------->GT1           --------->AHL20(2)       ---------                      ----------->GT1  <---------ANAC55(1)         <---------ATHB12      <---------ICU4               --------->MYB52(1) <---------YAB1<---------ATHB12   <---------ATHB51      --------->YAB1       <-----------GT1<---------ZAT6   <---------ANAC58            --------->ICU4      <---------YAB1 ------->GT1   <-----------GT1  <---------ZAT6  --------->ICU4   --------->YAB1       --------->TOE2(3)   tgaaaaatataacaaattaacagagtgtaaagtagtattatacgtgtaaaatcattaatcaaatgaacaataattacgttactctgttcattaatgacga  11827100                           <---------ANAC58                               <---------GLK1(1)                           <---------ANAC58                              ------->TEIL            ----       --------->ARR14(2)  ----------->GT1                           <---------TOE2(3)          ----- ---ZmHOX2a(2)             <---------ANAC46                  <---------RVE1(1)              <-------- -----ARR14(2)   --------->ATHB12                           --------->ARR11(3)      <---------ANAC46 ---->ARR14(2)--------->ANAC55(2)    <----------DOF2        <---------ARR11(3) --------------->AGL15 >YAB1 <---------ARR14(2) <---------MYB46(3) <---------ANAC46<---------CCA1(1) <---------------AGL15   tccaaaacagttcttcacttgattagattgggtgaatttcttttctgtcttgaattgaatcagatatttttgatgtatttcccattatgtgtattttaaa  11827200                      <---------TOE2(3)                            ---------->DOF2                     ---------->DOF2                          ----------->GT1   --------->ICU4   --------->AHL20(2)      <---------YAB1 <---------AHL20(2) ----->DAG2         <---------AHL20(2) <---------ICU4     <---------YAB1                ---------->DOF2 ----->DOF2  ----------->GT1         <-----------GT1    --------->YAB1          ---------->DOF2    <- -AHL20(2) ---------->DOF2         --------->AHL20(2)  --------->AHL20(2)    >>>>>>>>>TBF1  ---------   aagtaatgaagaataaagaaaattaaagttttggagattaaacattactataaacaaataataaatgtgaaaaggagaagaagaaagatggaaagtggga  11827300                                                                               <---------ANAC46                                                                               <------MYB46(1)             <------------CBF                                                 --------->MYB59            --------->ATHB12                                             <---------TOE1(3)           <-------TEIL                             <---------LBD16      <---------TOE2(3)        <------MYB83                   <---------ARR11(3)          <------MYB46(1)        <------MYB46(1)                --------->ARR11(3)          <------MYB83<------MYB83       --------->MYB59   ------>ZmHOX2a(1)       --------->ZAT2   --------->MYB59 --------->ZAT14  --      <-------TEIL------->TEIL   --------->ANAC58<---------ZAT2  <-------TEIL<-------TEIL        <--- -----ZmHOX2a(1) <-----------GT1 --------->ANAC58<---------At4g35610     --------->MYB59   <--------- >ALFIN1<---------DEAR3(2)     ---------->DOF2   --------->At4g35610 <----------DOF2   <---------ZAT18   aggatgggttcggttcattgaaccctccttaccaaaagcaaggtctctctcagcttcggagtctaggttcggttttaggttcggtatagtcgacttttgt  11827400                                    --------->ZAT6                                    <---------ALFIN1                               ----------->GT1                                --------->ANAC58                      <----------DOF2 <---------ARR14(2)             --------->ANAC46                    ------>ZmHOX2a(1) ------->LBD16                  --------->ANAC58                    ================================= ------LBD16 *TSS       <----------DOF2 --------->ZAT14        <----------DOF2   ---------->DOF2 -DOF2     <-----------ARR10<-----------GT1            ------>ZmHOX2a(1)     --------->ZAT6       <--   gcggataagaacgactcttcgctcttctttttacacgaacacttctctctctctctcctcactctctttcctctttctctcactaaagaaaaaactagcg  11827500            --------->YAB1            <---------ICU4           <---------YAB1                                   --------->YAB1         <---------ICU4                          ----------->RAV1(1)         --------->YAB1            --------->GLK1(1)   --------->ANAC58       --------->GLK1(2)     --------->YAB1     --------->ANAC46                       <---------ARR11(3) ====HOX2a_HOX2a     --------->HSFC1(2)         --------->REM1(1)         <---------YAB1--------->CCA1(2) ----ZmHOX2a(2)      <---------HSFC1(2)---------->DOF2 --------->ANAC58 --------->YAB1 --------->ARR11(1)   atcgaagagaatcatcatcaagaagctactatcagagaaatcaaagccctacaacacaagaatcaacatggtaatcacaatagaagaaagatttgaaatt  11827600                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                    <---------MYB52(1)   --------->ZAT14                                                                   <-----------HVH21     <---------ZAT14                                                     <------ZmHOX2a(2)                   <---------ZAT2                       <<<<<<<<<TBF1                <---------ARR11(3)        <----------DOF2               <-----------GT1                      --------->ARR11(3)   <---------ARR11(3)       ---           <---------MYB52(1)                   ---------->DOF2   <---------ANAC55(2)    --------->ZAT2 ---------->DOF2  <----------DOF2         <-----------GT1         <---------ANAC46   <-----------GT1<   tgttaaagtctctgttttttctttcttcttcaaatgctctgtttttacttcaaagatcgattcaaattccgtcaagaactctttttttcacagctctgat  11827700                         <---------ANAC58                         <---------ANAC58                  <---------------AGL15                 --------------->AGL15                 <---------------AGL15     ------->TEIL              <-----------GT1              <---------ARR11(1)  <----------DOF2----------------->AG      --------->ARR14(2) --------->YAB1 <-----------------AGL1     <---------ARR14(2) <---------ICU4 ----------------->AG       --------->GLK1(2) ------>WOX13(1)<-----------------AG      <---------CCA1(2)        <----------DOF2 ---------ATHB12<-----------------AGL3    <---------ARR14(1)   <---------GLK1(2)   caatctttattcgtttttacccaaattgggttctctcaaaactcgaatcttttttctcccaaattgattctttttaaaattcgactctgtttttcaatag  11827800                                                                                 --------->ATHB12                                                                                ------>ZmHOX2a(1)                                                   --------->At4g35610          <---------YAB1                                                   <---------At4g35610         --------->TOE2(3)                             <XXXXXXXXXXXXXXXXXXXMIR156A-F>>>>>>>>>TBF1     <---------ARR14(2)                   --------->MYB52(2)              <---------ZAT2           --------->ARR14(2)                  <-------TEIL                     --------->ZAT2          <---------CCA1(2)      <--   <---------MYB52(1)  <---------MYB46(3)      --------->ANAC46            --------->GLK1(1)      ---   actctgttttgtttctatggttcgtttgatgctcattcgtttttgttacagggagctgaagaagaaaccaataagacatatcctcattggctaaaacctc  11827900  Previous    Next  AGI:  At1g32700.1    Description:  zinc-binding family protein. similar to zinc-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63851.1); contains InterPro domain Protein of unknown function DUF597 (InterPro:IPR006734) Range:  from: 11827413    to: 11829739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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