Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------TOE2(3)                                                        --------->AHL20(2)                                                ----------->GT1                                                --------->LBD16                                            <---------ARR14(2)                                         <---------------AGL15                                        ----------------->AGL1                                        ----------------->AG                                        ----------------->AGL2                                        <-----------------AGL2                                        ----------------->AGL3 ---------TOE2(3)                       <-----------------AGL3 -------AHL20(2)           <---------TOE1(3)--------->ARR14(2)                        --------->MYB52(1) ------>AHL20(2)           <---------TOE2(3)--------->GLK1(2)            <---------WOX13(1) -------ICU4              <---------DOF5.7(2) --------->TOE1(2)       --------->AHL20(2) ------ATHB12             ---------->DOF2--------------->AGL15        <---------AHL20(2) ----->ATHB5    --------->ARR14(2)      <-----------------AGL1       --------->AHL20(2) <----------ID1 >ID1  --------->YAB1  --------->At5g28300 <---------CCA1(2) ---------->DOF2 -------->ZAP1      -----   ttaatgctataagaattgaattcgcagttaaagttagaaatacccaaatctgggaaaatttaagaaagagatttaattgacctagtagtaacgacgaata  10941900                                       --------->ANAC58    <---------YAB1                                       --------->ANAC58    <---------AHL20(2)                                    --------->MYB46(3)  <---------AHL20(1)                             ------>MYB46(1)            --------->AHL20(1)                             ------>MYB83     <------ZmHOX2a(1)                      ----------->GT1                        --------->MYB52(1)  --------->ANAC58    <-----------GT1     ----------->GT1 < ---->YAB1  <---------YAB1 <---------MYB59  --------->ANAC58--------->AHL20(2) ---------->DOF2   ----   agaaggaacacattataaaacaaaacaaaccgaacttaaccacgataaggaacttaaaaatattatttactacaaaattacaaaagaggtttaaaaaaaa  10942000                                                                                                <----                                                                                                <----                                              <---------HSFC1(1)                                -----                                          --------->GLK1(1)                                     -----                                         --------->ARR11(3)                                    <-----                                   --------->At4g35610                                         ------                                 --------->MYB46(3)                                            <-----         <---------HSFB2a(2)   --------->MYB52(1)                                    ----------->GT1         --------->HSFB2a(2) <---------MYB52(2)        >>>>>>>>>TBF1            <---------At4g35610    --------->DAG2           --------->MYB46(3)     >>>>>>>>>TBF1               --------->YAB1 ------   ---------->DOF2         --------->MYB52(1) --------->HSFB2a(2)         <---------ARR11(3)   <----- ----------ID1           <---------MYB52(2)   <---------HSFB2a(2)      <---------GLK1(2)       ------ ------>DOF2   <------ZmHOX2a(1)--------->SPL7--------->HSFC1(1)     <---------TOE2(3)      ---------   aaaggaaaagtcgagaaggagattaccacaaacgaacggctgagatttcgagaagaagaagaagtgtatttgagattatctctgatgatgttatacgaat  10942100 <----------DOF2 -----HSFC1(2) -----HSFB2a(1) ---->HSFC1(2) ---->HSFB2a(1) ------ARR10             --------->AHL20(2) --->ARR14(2)         <---------AHL20(2) ----ARR14(2)        --------->AHL20(2) --->GLK1(2)        <---------YAB1                                               --------->YAB1 ----ARR11(1)      --------->AHL20(1)                --------->AtLEC2        <---------AHL20(2) ->TEIL            --------->AHL20(2)   --------->AHL20(2)                   --------->AHL20(2)  ---- >ANAC46<-----------GT1  <---------AHL20(2) --------->AHL20(2)     ----------->GT1        -----------   cttctttttttttctatcaaatattatataattttagataaaaaaaataaaaaccatgaaaattgaagtatgtgaatatttaaaaataagagattgagac  10942200                                                                           --------->ZAT18                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                         *TSS                                                                  ---------->DOF2                                                                >>>>>>>>>E2Fc                                                                >>>>>>>>>E2Fd                                                               ------>NtERF2                                                              --------->ANAC58                               --------->ARR14(2)             --------->ANAC58                --------->ATHB12        --------->CCA1(2)     ------->GAMYB<---------ZAT18         <-    <----------ID1             <---------ARR14(2)             --------->ANAC46                    ---  ---------->DOF2              --------->GLK1(2)             <---------MYB55(2)                   <-- ------->GT1 ----------->GT1  <---------GLK1(2)              --------->MYB46(3)              -------- ------------->ANAC81     ---------->DOF2     <------ZmHOX2a(1)--------->LBD16               <-------   agagaaaagacaagagagtgatttgaagtaaagaatctggagaaacgaggaagttagagaacacccgccaaagaaaacgcactctcaagagtttttaacg  10942300                            <---------TOE1(1)                            <---------TOE2(1)                           --------->SPL7                         --------->TOE1(2)                         <---------SPL7                        <---------ANAC58                        <---------ANAC58                        <---------ANAC46                       --------------->AtSPL3                      --------->SPL7                    <---------ZAT14                    <---------SPL7                    --------->ZAT14                                       ----------------------->TaNAC69(2)               --------->ZAT14                                        --------->At4g35610               <---------ZAT14                  ----------->GT1       <---------ZAT2              --------->AtMYB61                 --------->LBD16       --------->ZAT2   <---------TOE1(3) -----ZmHOX2a(2)  --------->ANAC46            <---------LBD16         <---------At4g35610 ------>ARR14(2)--------->ANAC46        <---------ICU4            --------->ANAC46    <---------At5g28300 -------ARR14(2)<---------ALFIN1   ------>ZmHOX2a(2)           <---------At5g28300   <-----------GT1 ->MYB52(1)   <---------ALFIN1   --------->ARR11(3)           <-----------GT1   <---------AHL20(2) ----GT1     --------->ANAC46    <---------ARR11(3)  <---------ARR14(2) <----------DOF2<---------TOE2(3)   gatcagcgtttgatcaccacaccgtaccgtacgatgatctaatatttatgcggaaaatactgaattaccctcagctttctgtttattttacggttctatg  10942400                           <---------SPL7                       --------->MYB52(2)               ----------->HVH21              --------->LBD16             <---------ANAC58                                       ----------->GT1       <---------MYB52(1)             <---------ANAC55(2)                             <------NtERF2              <---------ANAC58             <---------ANAC55(1)                            <-----------HVH21           <---------ANAC46             <---------ANAC46                              --------->ANAC46     <-----------GT1             --------->ANAC55(2)                          ------>NtERF2         <---------WRKY18(1)             <---------ANAC58--------->SPL7               --------->LBD16      ----------->HVH21    ---------->ID1 ------>ZmHOX2a(2)          <---------TOE1(3)    --------->DAG2    <---------MYB52(1)  <---------MYB46(3)  --------->SPL7 <----------DOF2    <---------LBD16---------->DOF2  <---------ANAC58  <-----------RAV1(1)<---------MYB52(1)       <---------TOE2(3)   ---------->DOF2<---------At5g28300   ccatttgttgttcttccgtgatcgttcgtcgaacgtcgtctttggttttaggtttctctccgcgtcggaaaagtaaagagtttgaccgtttcgttttttt  10942500                                                      --------->LBD16                                                     --------->ANAC46                                                    <------NtERF2                                             <-----------GT1            <---------YAB1                                          <---------ICU4               <---------AHL20(1)                                          --------->ATHB51             <---------AHL20(2)                                         <---------YAB1              <---------YAB1                            <---------At4g35610<---------ANAC58   --------->ICU4                ---------->DOF2          --------->ICU4<---------MYB52(1)      ---------->ID1       <         <------NtERF2      --------->At4g35610<---------ANAC58   --------->AHL20(2)         <-------   ---------->DOF2<---------TOE2(3)   <-------TEIL  <---------LBD16<---------AHL20(2)   <----------DOF2   atccaaaacgcgtcgttttaaaggaaatggagatgaaagtttcattatttcgtccccgtaatttagtatttattattttttgtagctatacttttgagat  10942600                                                                          --------->ANAC58                                                                          --------->ANAC46                ----------->GT1            <-------TEIL                   <----------ID1         <-------TEIL                     --------->ARR11(3)              --------->ANAC58         <---------ZAT14               <---------TOE1(3)            <---------AHL20(2)         --------->ZAT14               --------->DAG2               --------->AHL20(2)     <---------------AtSPL8        --------->YAB1------->TEIL  --------->AHL20(2)    ---------->DOF2              --------->AHL20(2)            --------->AHL20(1)   <---------ARR11(3) ------ZmHOX2a(2)       ----------->GT1<---------TOE2(3)       <---------AHL20(2)   --------->ARR11(3) --TOE2(3)    --------->ZAT14   --------->YAB1  <---------CCA1(2)  --------->AHL20(2)    <---------ALFIN1   agatcagaaagtacagagaagtcaaattgtagaataaaaataaggttcttgaatcttattagaaataaaataaatcacgacaaaaacatctccacatgag  10942700                         <----------ID1             <------ZmHOX2a(1)           <---------TOE2(3)                                   <---------------AtSPL8              <-       --------->At4g35610                                <---------ARR14(2)                 <-------       ----------->RAV1(2)                      ---------->DOF2--------------->AtSPL3  --------------       <---------At4g35610         ----------->GT1    <-------TEIL   <----------DOF2   <-------------    <<<<<<<<<<WRKY26 ---------->DOF2        ---------->DOF2    --------------->AtSPL8<-----------RAV1(1)   agtttgatcaactgaggaaaactaaaagaaacaaaatgtgtaaaacaaaagaaagatgcaaatttgtggtacttttaatcaagtcttgtgttgtactttc  10942800  Previous    Next  AGI:  At1g30810.1    Description:  transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein. similar to MEE27 (maternal effect embryo arrest 27), transcription factor [Arabidopsis thaliana] (TAIR:AT2G34880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46776.1); contains InterPro domain FY-rich, C-terminal; (InterPro:IPR003889); contains InterPro domain FY-rich, N-terminal; (InterPro:IPR003888); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji, JmjN (InterPro:IPR003349); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxyla Range:  from: 10937885    to: 10942273    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g30814.1    Description:  contains InterPro domain Zinc finger, LSD1-type (InterPro:IPR005735) Range:  from: 10942629    to: 10944708    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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