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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              <-----
                                                                                             -------
                                                                                             <------
                                                                                             <------
                                                                                        --------->HSFB2a(1)
                                                                                        <---------At4g35610
                                                                                        <---------HSFB2a(1)
                 --------->ATHB12                                                       <---------ZAT2
                 <--------HAHB4                              --------->ANAC58           <---------HSFC1(2)
                 <---------ICU4                              --------->ANAC58           --------->ZAT2
                <---------ATHB12                 --------->AHL20(2)                     --------->HSFC1(2)
         --------->At4g35610                     <---------AHL20(2)                     --------->At4g35610
         <---------ZAT2                         --------->AHL20(2)                  --------->LBD16
         --------->ZAT2   <------ZmHOX2a(1)     <---------AHL20(2)                 <---------ANAC58
         <---------At4g35610                 --------->AHL20(1)                    <---------ANAC46
         <---------HSFB2a(1)                 <---------AHL20(1)                    <---------ANAC58
         --------->HSFC1(2)                  <---------AHL20(2)                    <---------LBD16
         <---------HSFC1(2)                 --------->AHL20(2)                    <---------LBD16
         --------->HSFB2a(1)  ---------->DOF2--------->AHL20(2)                 <--------P   -------
 
cctggttttgggagcttccatcatttggaggactaaagtcatagcgaataaattaattcttctcaagtaaggctcgaactctggttgcgggagcttccct  10343600
                                                                                      --------->YAB1
                                                                                      <---------ICU4
                                                                                     <---------YAB1
                                                                                     --------->ICU4
                                                                                   --------->YAB1
                                                                                   <---------ICU4
                                                                                <---------ICU4
                                                                                --------->YAB1
                                                                               <---------YAB1
                                                                               --------->ICU4
                                                                             --------->YAB1
                                                                             <---------ICU4
                                                                            <---------YAB1
              --------->MYB46(3)                                            --------->ICU4
            <---------DOF5.7(2)                                           -------->ATHB1
           <---------WRKY12                                               --------->YAB1 <---------ICU4
           <---------WRKY38(1)                                            <---------ICU4 --------->YAB1
           <---------WRKY45                                              --------->AHL20(2)
          --------->WRKY18(1)                                            <---------AHL20(2)
----------AGL15                 <---------ANAC58                         --------->ICU4 <---------YAB1
---------->AG --------->ANAC46  <---------ANAC46                         <---------YAB1 --------->ICU4
-----------AGL3  --------->ANAC58                     <<<<<<<<<<WRKY63   --------->AHL20(1)<--------
-----------AGL1  --------->ANAC58         ---------->DOF2           --------->YAB1<---------YAB1
---------->AGL1------->GAMYB    <---------ANAC58<-------TEIL       <---------YAB1 --------->ICU4----
 
catttggaggctagtcaacgacgcattactgaattgcctatacttaaaagttacatagtcaaatattgttatgaaaattattattattattattattatt  10343700
                                                                                                  --
                                                                                                  --
    ------>MYB83                                                                      --------->WOX13(1)
    ------>MYB46(1)             <------------CBF                                    ------------>CBF
   --------->WOX13(1)   <---------ARR11(3)                             <---------ANAC58  --------->YAB1
  --------->AtMYB61 --------->YAB1                ------>MYB46(1)      <---------ANAC58  --------->AHL20(2)
------>NtERF2 <---------HSFB2a(2)                 ------>MYB83   --------->AHL20(2)--------->ANAC58
-YAB1<---------ATHB12 <---------YAB1            <---------MYB59  <---------AHL20(2)--------->ANAC46
----->ANAC46  --------->HSFB2a(2) --------->AHL20(2)      <----------DOF2          --------->ANAC58
 
cgcgaccaatcaatgttatggaaacatgattttcaaattgaatatgaagaaccaaactattctttgattttatttcttgagaatataagcaattaaaaaa  10343800
                                                           --------->AtLEC2
                                                      --------->AGP1   <---------TOE2(3)
                                    --------->HSFB2a(2) <-------TEIL ---------->DOF2
          ----------->GT1           <---------HSFB2a(2)<------ZmHOX2a(2)                           -
    <------ZmHOX2a(1)          <---------MYB46(3)     --------->ARR14(2)                   ---------
------->At4g35610         ---------->DOF2             <---------ARR11(3)      ---------->DOF2 <-----
--------->RAV1(2)  --------->YAB1 <---------ANAC46    <---------ARR14(2)----------->GT1  -----------
 
catctgaggagactagaaaaactcataacaaaagttgttgtggaagaacaaagtctagatccatggaagaaacaaaggtaaaaaagaaaatgaacaataa  10343900
                                                                                                   -
                                                                                                 ---
                                                                                            <------MYB46(1)
                                                                                            <------MYB83
                                                                                           <--------
                                                                                           ---------
                                                                                           ---------
                                                                                           <--------
                                                                              <---------------------
                                                                       <---------ANAC46   <--------P
                                                                       <---------ANAC58  <-------GAMYB
 <---------ANAC58                                                      <---------ANAC58 <------MYB46(1)
 <---------ANAC58                                                 <---------ANAC58      <---------MYB46(3)
-------->MYB52(1)                         <---------At5g28300     --------->ANAC55(2)   <------MYB83
>YAB1                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ANAC58     --------->MYB59
----ARR11(3)             --------->MYB46(3)                      <---------TOE2(3)     <---------AtMYB61
->CBF                   -------->P      <---------YAB1          <-----------GT1   <---------AHL20(2)
 
cttaacgtgctaatccatatttttgctaaccacttacgatgttattactgtgatttctcatttgattttacgtttcgggttttatttagtttggttggtc  10344000
                                                  <---------YAB1
                                               <----------DOF2
                                          --------->DOF5.7(2)
----------->CBF                         <---------ANAC58
--->ZmHOX2a(1)                    <---------TOE1(3)                                                -
-MYB46(3)                         <---------TOE2(3)                     <------ZmHOX2a(1)         <-
>MYB59                           --------->MYB52(1)         <------ZmHOX2a(1)      <------NtERF2<---
>MYB111(1)                       <---------DOF5.7(2)<---------GLK1(2) <---------TOE2(3)         <---
-AtMYB61             --------->ANAC58   <---------ANAC58  <---------TOE1(2)     ------>NtERF2  <----
---ANAC81            --------->ANAC58   <---------ANAC46 <---------LBD16============================
 
cttacaatctcataaaacagagccaagaaatatggctaacgtttcgtttacttttgattctcaggaacaaaataaggaattgaggccgagtagattagtg  10344100
       <---------YAB1
     --------->At4g35610
   ------>ZmHOX2a(2)
   ==========================HOX2a_HOX2a
  ===========================HOX2a_HOX2a
  <------ZmHOX2a(2)
  --------->CCA1(2)
 <---------ARR11(3)
 --------->ARR11(3)
 <---------AGP1
 --------->AGP1
 <---------ARR14(2)
 --------->ARR14(2)         --------->ANAC58
---------->ARR10            --------->ANAC58
-------P               ----------->HVH21
---MYB46(1)           <------ZmHOX2a(1)
---MYB83             <------MYB46(1)                ---------->DOF2
-----MYB46(3)      <--------P                    ----------->GT1
=========HOX2a_HOX2a <------MYB83       ---------->DOF2                        <---------MYB52(1)
 
ggtagatctgatgagagaaatggtaggagacagggaacagagcaaaagaagaaggtaaagaaactgaacaaaaacttactctgttatctactctgtattt  10344200
                            <---------LBD16
                            <-----------RAV1(2)
                  --------->ANAC58
                  --------->ANAC58                                                        <---------
               <---------REM1(2)  ---------->DOF2                                        -----------
             --------->ETT(2)  <------ZmHOX2a(1)                              <----------DOF2
             <---------ETT(2) --------->LBD16         <---------ZAT6      --------->GLK1(2)
 
tgtgatgaaacaagagtcgacacgatttttttcaggagaaagaagactcgggttttagagtaagcgaagagggtgagattcctttgcaacaagggtcaaa  10344300
                      ----------->HVH21
                     ------>ZmHOX2a(2)
                    <---------At4g35610
                    --------->At4g35610
                   <---------ARR11(3)
                   --------->ARR11(3)
                 ----------->ARR10                                     --------->AtLEC2
           --------->LBD16                                        --------->ANAC58                --
           <---------LBD16        ------->GAMYB                   --------->ANAC58            ------
--HVH21   --------->ANAC46     ----------->RAV1(1)            <------ZmHOX2a(1)        --------->GLK1(2)
>GT1     <---------LBD16      --------->MYB46(3)           <---------At4g35610         --------->ICU4
 
tactgactcatacgcgcgggatgatctgacacaacaacagagagtgagtgatgttgtgatgcagaggagaagccatgaaacagagtcgagattatggcaa  10344400
                                                                                           <--------
                                                <---------TOE2(3)                          ---------
                                                <---------TOE1(3)                         <------ZmHOX2a(1)
 ---------->DOF2                               <---------DOF5.7(2)                     <---------LBD16
--------->GT1                                  <-----------GT1                         <-----------RAV1(2)
---->DOF2 ---------->DOF2          <----------DOF2      <----------DOF2<-------TEIL<<<<<<<ZML2 <----
 
agggtaaagaaactaaagtcttgctcttacacaatatgctttgtttgatttaacgttttcttttgaatatttgatacattaggctagaactcaggatagg  10344500
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AGI:  At1g29600.1   
Description:  zinc finger (CCCH-type) family protein. similar to ZFN2 (ZINC FINGER PROTEIN 2), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G32930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24069.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76191.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)
Range:  from: 10344032    to: 10345637    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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