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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                <----------DOF2
                                                             --------->ARR11(3)
                                                             <---------ARR11(3)
                                                            --------->REM1(1)
                                                          ----------->RAV1(1)
    --------->ARR14(2)                                 --------->HSFB2a(2)            <---------TOE2(2)
------>ALFIN1                              --------------->AtSPL8           ------>ZmHOX2a(1)   <---
 
gtggaaggaacttcttggctacaatgagacaatcggatttatagttcatgtactatttctgcaacatctttttgttctcctaaactacataggtttgtgc  10332000
                                                                                                   <
                                                                                                  <-
                                                                                                  --
                                                                                                  --
                            =========================HOX2a_HOX2a                                  <-
                            <------ZmHOX2a(1)                                                 <-----
                         ============================HOX2a_HOX2a                           <--------
    <---------ANAC58     <------ZmHOX2a(1)                                     <-------TEIL---------
    <---------ANAC58  <---------LBD16                       <---------------------WRI1     <--------
-------DOF2           <-----------RAV1(2)     ------>ZmHOX2a(2)   <-----------GT1        <----------
 
tattgtgacttatccaatttgtttttcaggaggatgcaaagactcttgatcgtgatgctaaacgtcgatatactgtatgagattcaacagttttacttgt  10332100
      --------->LBD16
      <---------LBD16
      ------>NtERF2
     --------->DEAR3(1)
     <---------ANAC46
     <---------LBD16
---------GLK1(2)
--------ZAT2              ---------->DOF2
------->At4g35610     <---------ANAC55(2)
------->ZAT2   <---------HSFB2a(2)                       <---------At4g35610
--------At4g35610     ----------->GT1             --------->MYB52(2)
------HVH21    --------->HSFB2a(2)              <---------MYB52(1)        --------->At5g28300
-ANAC58    --------->GLK1(1)--------->DAG2     <----------DOF2      <----------DOF2   <-------TEIL
------------>WRI1     --------->ANAC58      <---------ARR11(3) ------>ZmHOX2a(2)---------->DOF2
-ANAC58<------NtERF2  --------->ANAC58  <---------ICU4 <---------ANAC58  ----------->GT1         <--
-GT1<---------LBD16  <-----------------------TaNAC69(2)<---------ANAC58  <---------ZAT6 ------->TEIL
 
cagcttcgccggggaaatcgagaagacgtaaaaggggaagtcaacatgacctttagttgcctctgatctatctttactgtaaaaaaagatgcacatttag  10332200
                                                      <---------ANAC55(2)
                                ------>ZmHOX2a(2)     --------->ANAC55(2)
                               <------ZmHOX2a(2)      <---------ANAC46
                              --------->ARR14(2)      ----------->GT1            --------->DAG2
                              --------->GLK1(2)       <---------ANAC58          ---------->DOF2
                              <---------AGP1          <---------ANAC58      <---------TOE2(3)
                              ------->TEIL   <-------TEIL                 ---------->DOF2
                   ----------->GT1      ---------->DOF2              ----------->GT1
-------ZAT18 --------->YAB1   <---------ARR14(2) --------->ATHB12   <---------ZAT6              <---
 
ttcacattttcaactatcagaattgttgaaacggatctgtatcaaaagtacatgatttcgtaattttcttagtggtataaaggaaaaggaatttcgaaat  10332300
              <---------ICU4
              <--------HAHB4                                                                    ----
              --------->YAB1                                                                   <----
         <---------MYB52(1)                                                                 --------
        --------->TOE2(3)                                                                   --------
        --------->TOE1(3)          <---------AHL20(2)                           <---------AHL20(2)
      <---------TOE1(2)       <---------MYB46(3)                               --------->AHL20(2)
      <---------TOE2(2)       <------MYB46(1)                     <---------MYB46(3)        --------
   <---------ANAC58       <---------MYB46(3)           --------->MYB52(1)      <---------AHL20(2) <-
   <---------ANAC58       --------->MYB55(2)    <-----------GT1 <---------At4g35610       ----------
--------GT1  <---------ATHB12 <------MYB83---------->ID1*TSS    --------->At4g35610 ----------------
 
tacatttcttacgttaatcattttctcagttgttggttttaatttgtcttataacccataacagagtagctgttgaagaaaattaaatccattaaaagcc  10332400
                                                                              --------->DAG2
                                                                             ---------->DOF2
                                                                        <-----------HVH21
                                                                     <---------ANAC58
                                                                     <---------ANAC55(1)
                                                                     <---------ANAC58
                                                 --------->LBD16     <---------ANAC46
                 --------->AHL20(2)             <---------ANAC46     --------->ANAC55(2)
           --------->LBD16                      <---------ANAC55(1)  <---------ANAC55(2)
          --------->ANAC58                      <---------ANAC58     <---------bZIP60(2)
----->LBD16------>NtERF2                        <---------ANAC58     ===================bZIP_DOF
-------RAV1(2)   --------->YAB1       <---------AHL20(1)             --------->O2
->ANAC58  --------->ANAC58            <---------ARR11(3)             ===================bZIP_DOF
->ANAC58  --------->ANAC46            --------->AHL20(1)             --------->TGA1a
->ANAC46  <<<<<<<<<<E2Fa              --------->ARR11(3)             <---------TGA1a
-----ZmHOX2a(1) <---------ATHB12      --------->AHL20(2)             <---------O2
>DOF2    <---------LBD16              <---------AHL20(2)          ----------->TGA1
->AGL3<-----------GT1                --------->AHL20(2)           ----------->HVH21          <------
 
aggaaaatgtttcccgccaataaaaaaactaaacttgcaaatatatttcttccgtgtgaaaactgaaaactgacgtgtcataaagtatgcatataaaaac  10332500
    --------->ATHB12
 <----------DOF2                                   --------->YAB1             <------NtERF2
-----GT1                                 ---------->DOF2            ---------->DOF2
 
cattctttgatttgattttcagagaagaagagcatttagaaaacaaaagcggaataagaaacaagattgaagaaagaagtcggagaagacagtagaagaa  10332600
          <---------ARR11(3)
          --------->ARR11(3)                                                                    ----
       <------ZmHOX2a(1)                                                                       <----
   <---------TOE1(1)                             --------->YAB1                           --------->MYB52(1)
   <---------TOE2(1)    --------->TOE2(3)   <---------ARR11(3)                      ------->GAMYB
 --------->CCA1(2)      <----------DOF2     --------->ARR11(3)     ---------->DOF2--------->At4g35610
 
actgatacgaggagaacttactctcaactttaatggcagacgctggagataatcagagaagaagcgatgaaaaagagtcgatatcaactgaagaaacgaa  10332700
                                                              <------ZmHOX2a(2)
                                                              =========================HOX2a_HOX2a
                                                 <---------YAB1                 <------ZmHOX2a(1)  -
                                                 --------->ICU4                 ====================
    --------->ANAC58               <---------ZAT14  <---------YAB1           <-----------RAV1(2)  <-
    --------->ANAC46               --------->ZAT14--------->YAB1       ------->TEIL              <--
    --------->ANAC58            <----------DOF2--------->YAB1--------->ARR14(2) ====================
------->GT1       <---------ARR11(3)          <---------YAB1 --------->AGP1  <---------LBD16     ---
-----TOE2(3)      --------->ARR11(3) <---------ANAC46        <---------ARR14(2)--------->LBD16   ---
 
ggtaaacaagaaactgaacaagaacttgctctgttctttgcagtggattattatgatgaaaccagatcgatacgaatttctcaggagaatgaagacttgg  10332800
         --------->ANAC58
         --------->ANAC58
         --------->ANAC46
       --------->MYB52(1)
--------->HSFB2a(2)
<---------HSFB2a(2)
----->ZmHOX2a(2)
======HOX2a_HOX2a
-----ZmHOX2a(2)                                                                           --------->GLK1(1)
-------ARR14(2)                                             --------->At4g35610          --------->ARR14(2)
=====HOX2a_HOX2a                          --------->ANAC58 --------->ARR14(2)            <---------ARR14(2)
------>ARR11(3)      --------->ICU4       --------->ANAC58 <---------ARR14(2)      --------->ARR11(3)
------>ARR14(2) --------->ANAC46     ----------->HVH21     --------->GLK1(2)   ---------->DOF2     <
 
gatctggaagaaacgacacaggtcatcatgtatacaacgagggacacgaagaggtactagagtatctgaaacaagagagactgaaagatgctgatatgca  10332900
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AGI:  At1g29550.1   
Description:  eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative. Identical to Putative eukaryotic translation initiation factor 4E-4 [Arabidopsis Thaliana] (GB:Q9C7P6); similar to eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G29590.1); similar to eukaryotic translation initiation factor 4E [Lactuca sativa] (GB:AAP86602.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040)
Range:  from: 10330500    to: 10332312    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At1g29560.1   
Description:  nucleic acid binding / zinc ion binding. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G29570.1); similar to mCG120171 [Mus musculus] (GB:EDL00663.1); similar to PREDICTED: similar to hCG1642996 [Mus musculus] (GB:XP_909443.3); similar to PREDICTED: trichohyalin [Mus musculus] (GB:XP_001000857.2); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)
Range:  from: 10332357    to: 10335680    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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