Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <----------DOF2                                                                                      <---------DAG2                                                                                   <---------ALFIN1                                                                            --------->KAN4(2)                                                                           --------->HSFC1(2)           ------>ZmHOX2a(1)                                               --------->HSFB2a(1)   --------->GLK1(2)              <---------AHL20(1)                       <---------HSFC1(2)   --------->ARR14(1)         <---------AHL20(2)                           <---------KAN4(1)  --------->ARR14(2)         <---------AHL20(1)                            --------->KAN4(1)  <---------ARR14(2)         <---------AHL20(2)    ----------->ARR10       <----------TaMYB80  <---------GLK1(2)          --------->AHL20(2)<---------At4g35610         <---------HSFB2a(1)  <---------ARR11(3)         --------->AHL20(1)--------->At4g35610        ---------->TaMYB80  --------->ARR11(3)   <-----------GT1         --------->ZAT2             <---------KAN4(2) ---------->ARR10     <-----------GT1          <---------ZAT2           <------ZmHOX2a(1) ---------ATHB12   --------->AHL20(2)     <-----------GT1     <---------ALFIN1   ------>ZmHOX2a(1)   caaagattctctccttcccaattttttccaatttaatatgtttttttccagcttagtttctcccctactctcgaggaatattcctccacttttgccaaaa  8976000                                                        --------->ARR11(3)       ------->TEIL                                                        <---------ARR11(3)    <---------YAB1                                                        <---------AHL20(1)   <---------TOE2(3)                                          <---------YAB1--------->AHL20(1) <---------AHL20(2)                                        --------->CCA1(2)           --------->At5g28300  XXXXXXXXXXXX              <----------DOF2         --------->YAB1    <---------AHL20(2)<---------AHL20(2)        <----------DOF2              <---------YAB1--------->AHL20(2)     --------->AHL20(2)     ----     <---------ARR11(3)     ----------->GT1  <-----------GT1       ----------->GT1 ----------->GT1  <----------DOF2  <---------YAB1 <---------AHL20(2)    --------->AHL20(2)--------->AHL20(1) <-------   acttctttatctttttcttttctgataaaaatgtaatttatgatatgataccatataatatattctaaactgtaaatttaatgaatgtttaaaattttct  8976100     --------->ARR11(3)     <---------ARR14(2)     <---------ARR11(3)                     <---------MYB52(1)                                 ------     --------->ARR14(2)              --------->ZAT14                                         <-------    <---------CCA1(2)             <<<<<<<<<TBF1                               <---------------AGL15  --------->ANAC55(2)        --------->KAN4(2)            --------->AHL20(2)  --------------->AGL15  <---------ANAC55(2)       <---------GLK1(1)      <---------YAB1            <-----------------AGL2 XXXXXXXX>MIR781           --------->ARR11(3)   <---------YAB1 <-------TEIL  <-----------------AG --- ------->GT1               --------->ARR14(2) --------->MYB52(2)             <-----------------AGL1 ----GT1 <---------YAB1    <---------ARR14(2) <---------MYB46(3)             <-----------------AGL3   ggttacatatcttgattccaatctctatggatattcttcttcactcgtttgttattacaaaaaaattcatgtgtatatttctaaaataggtagagaataa  8976200                                                             <-----------HVH21                                                             <-----------TGA1           --------->ZAT2                                                            --------->ANAC46            <---------ZAT2                                                            --------->bZIP60(2)         <---------At4g35610                                                          <---------DOF5.7(2)           --------->At4g35610                                                         <---------WRKY12              ------>NtERF2                                                        --------->DOF5.7(2)  <---------bZIP60(1)                                                       <-----------TGA1      --------->TGA2(1)                                                       --------->TOE2(3)     <---------TGA2(1)      ---------->DOF2                                  --------->TOE1(3)     --------->bZIP60(1) --->MYB52(1)          --------->ICU4            --------->TOE2(3)      --------->At4g35610 --KAN4(2)---------->DOF2                     <---------CCA1(2)  <---------YAB1 <---------ICU4 ---->GAMYB          <---------ICU4    ---------->ID1 --------->ANAC46  <---------At4g35610   ccgaagaaaaaagaaagagttagtaatgactaaaatgactcgtcgttcttatctcaacgtcaacgtcatgagaatgctgacatcatcgccagctcgatag  8976300                                --------->KAN4(2)                               --------->KAN4(1)                               <---------KAN4(1)                               <---------HSFB2a(1)                               <----------TaMYB80                               --------->HSFB2a(1)                              ---------->TaMYB80                              <---------KAN4(2)                              <---------ARR14(2)                              --------->ARR14(2)                            --------->LBD16                           --------->LBD16                          --------->LBD16                         <---------LBD16                      --------->ARR14(2)                      <---------ARR14(2)                                                           --                     --------->GLK1(1)                                           <-----------GT1   <-                     <---------GLK1(1)                               ----------->TBP         --------              <---------ARR14(2)<---------ARR14(2)    --------->TOE1(3)   <---------At5g28300--------              --------->ARR14(2)--------->ARR14(2)    --------->TOE2(3)  <-----------GT1     --------    ---------->DOF2  <---------CCA1(2)           <---------MYB52(2)------>ZmHOX2a(1)  <----------DOF2   aatatggaaaggaaggaatccacatatccccgaatattctccctgtatcaaacaaacctcagcctattcctatatttaccattctaccctttcccaagta  8976400                                         <---------ANAC55(2)                                         --------->ANAC58                                         --------->ANAC55(2)                                         --------->ANAC46                                       --------->CCA1(2)                                      <---------SPL7                                    <---------TOE2(3)                                    --------->MYB59                                <----------DOF2    ----------->HVH21                            <-------TEIL<-------TEIL<---------ALFIN1                           --------->GLK1(2)      --------->DEAR3(2)                           --------->CCA1(2)   <---------DEAR3(2)                           --------->ARR14(1)  ------>NtERF2                          <---------GLK1(2)   <---------DEAR3(1)                          <---------ARR14(2)  --------->DEAR3(1)      --------->AHL20(2)  --------->ARR11(1) --------->ATERF1(1)            <----------DOF2   --------->LBD16        --------->ARR14(2) --------->RAP2.6(3)          ------>ZmHOX2a(1) ------->ARR14(2)        <---------HSFC1(2)----------->HVH21          ------>MYB83 ------>NtERF2 --------ARR14(2)        --------->HSFB2a(1)--------->MYB52(1)        <---------ARR14(2) ->ANAC58                --------->HSFC1(2)--------->ANAC46           --------->ARR14(2) --->GT1                ----------->ARR10--------->ANAC58             ------>MYB46(1) ->ANAC58            *TSS<---------HSFB2a(1)<---------ATERF1(1)     --------->AtMYB61  <----------DOF2   aaatccgaataaatctaaacatcaagaagattcggttttaggtacgcgacggcccgacctcgattagacaccaatcctctttctctgccctttaaaactt  8976500                         <----------DOF2                                               <------------AtMYB77                         ------>ZmHOX2a(1)                                        --------->ANAC55(2)                     <-----------GT1                                              <---------ANAC58                    <-----------GT1                                               <---------ANAC58             ---------->DOF2               <------ZmHOX2a(2)               <---------TOE2(3)          --------->TOE2(3)               --------->AGP1               --------->ARR11(3)         <----------ID1  =========================HOX2a_HOX2a          <---------ARR11(3)--------->At5g28300   ccaacttaaaaacgtcaaagttttatcctttctctctcattttagatccaaaactcttctctgtctctctcaagatttatgttttcgtaactgtaactca  8976600                             <---------ICU4                             -------->HAHB4                             --------->YAB1                            <---------YAB1                            --------->ICU4                          --------->YAB1                          <---------ICU4                         --------->ICU4                       --------->YAB1                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                <---------ANAC46                    <---------ARR14(2)                <---------ARR14(2)                <---------bZIP60(2)                 --------->ARR14(2)                --------->AGP1                 ----------->HVH21                   --------->ANAC58                --------->ARR11(3)            <-----------HVH21 --------->LBD16<-----------HVH21    <                <---------ARR11(3)            --------->At5g28300             --------->bZIP60(1)   -                <---------AGP1 <---------YAB1----------->GT1 --------->ANAC46 <---------bZIP60(1)----                --------->ARR14(2)          <---------DEAR3(1) --------->HSFB2a(2) --------->ANAC58 <   tagcaaaaacgagtctaagatctgttcataatgatgatgttcaagagcggtgacatggattacacccagaaaatgaagagatgtcacgaatatgtagaag  8976700                                              <---------DAG2        <----------ID1                        <----------DOF2      >>>>>>>>>TBF1                     <---------At4g35610 ---------HSFB2a(2)                     --------->At4g35610 -------->HSFB2a(2)   <-------TEIL      <---------ZAT2                                       <------- ----->ARR11(3) ---------->DOF2    --------->O2   <---------YAB1                  <-----------GT1 ---------HSFC1(1)   --------->CCA1(2)  --------->ZAT2   --------->ARR11(3) ----------->GT1------>ZmHOX2a(1)   ctctagaagaagaacaaaaaaagattcaagtctttcaacgtgagctccctttatgtttagaacttgtaacccaaggtaatgttattacacatcctctttt  8976800                  <-----------GT1                                                              ------    <---------ARR11(3)                                                              <------ZmHOX2a(1)    --------->AHL20(1)              --------->TOE2(3)                         <<<<<<<<<<AtTINY2------    --------->ARR11(3)  ------>ZmHOX2a(2)              <---------YAB1         --------->ETT(1) <-----   <---------AHL20(2)  <------ZmHOX2a(2)        --------->ANAC55(2)        --------->O2       <------ ---DOF2   ---------->ID1        <---------GLK1(2)  <---------YAB1         <---------O2  --------->MYB52(1)   gatatatatattcttcgttttcacgatcgcttccagtttcttaattgtttacatatcattcttgtagctatcgagtcatgtcggaaggagttatcggaat  8976900  Previous    Next  AGI:  At1g25550.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G68670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42100.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 8976421    to: 8978080    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version