Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->ALFIN1               <---------WRKY12               <---------WRKY38(1)                                ----------->GT1        <---------YAB1                                         --------->ALFIN1       --------->AHL20(2)                                      <---------ANAC46    ------->TEIL    ----------->GT1    <---------AHL20(2)     <---------MYB52(1) >TEIL <---------AHL20(2)             <---------AHL20(2)   <---------LBD16                        <-- --CCA1(2)    --------->WRKY18(1)     --------->AHL20(2) <-----------HVH21                --------->ARR11(3)   tctatgcatttttatggtcaaggtgtgaattttgttttgtttaaattgtttgactaatgtgtccggtgtggataattgttttctctaatttagttcttgt  6120300                             --------->ETT(1)                             <---------ANAC46                            <------NtERF2       --------->AHL20(1)              <---------AHL20(2)                --------->ARR11(3)              --------->AHL20(2)                <---------AHL20(1)       <-----------GT1  <------MYB46(1)        --------->CCA1(2)        <-----------GT1  <---------AHL20(1)    <------MYB83          <---------ARR11(3)     <---------GLK1(2)  <---------AHL20(2)   <---------AtMYB61      --------->ARR11(3)     --------->ARR11(3)  --------->AHL20(2)<-----------RAV1(1) <---------YAB1               <---------ARR11(3) -------AHL20(2)   <---------TOE2(3) <---------TOE2(3)             <---------TOE2(3)           <-----   ttattttatttactatttttttatgttggtgtcggaattgagattatagatatattgaaattttctattgagattttctatttttcaaattggaattttg  6120400                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                             --------->CCA1(2)                                            --------->ARR11(3)                                            --------->AGP1                                            --------->ARR14(2)                        <------------CBF                                            <---------AGP1                     --------->CCA1(2)                                            <-----------ARR10                 --------->ARR11(3)    <---------GLK1(1)               <---------AHL20(2)                        <---------ARR11(3)    --------->GLK1(1)               --------->AHL20(2)<------------CBF      ----------->ARR10<-------   <---------ARR11(3)               <---------ATHB51--------->ARR11(3)  --------->YAB1>>>>>>>>>GATA-3   --------->ARR11(3)        --------->ZAT6 <---------ARR14(2)         <---------YAB1 >>>>>>>>>GATA-1 <---------TOE2(3)          <---------YAB1  <---------ARR11(3)      <---------AHL20(2)>>>>>>>>>GATA-4 ----YAB1                 --------->YAB1   <---------CCA1(2)       --------->AHL20(2) >>>>>>>>>GATA-2   aataagatttcttcttagcccagtggtatcatcactaaataattcagatctgaacatattgtaatgcgattttataataagatatgtggattgaatattg  6120500                                                                                               ------                                                                                               ------                                                                                               ------                                                                                            -------->HAHB4                                                               ----------->GT1              ---------                                                         <---------HSFB2a(2)                ---------                                                      <-----------GT1                       <--------      --------->YAB1                             <---------AHL20(2)   ----------->TGA1     --------->ICU4     <---------YAB1 <---------ICU4       <---------MYB46(3) <<<<<<<ZML2  <---------YAB1    <---------YAB1 -----CBF        --------->YAB1     --------->RAP2.6(3)  --------->HSFB2a(2)   <---------TOE2(3)   tcacaaaattatagtttattcatcagtatttcagtctgaacggctgtttagtttatttactagaacagaaaaatgacgatttatgtttttgtaatgatcg  6120600                                                                                     ------>ZmHOX2a(2)                                                                                    --------->GLK1(1)                                                                           --------->YAB1                                                                           <---------ICU4                            <---------ANAC58                               -------->HAHB4 --------->TOE2(3)          <---------ANAC55(2)                        <---------AHL20(2) --->ANAC58                 ----------->GT1                           <---------WOX13(1) >ZmHOX2a(2)                <---------ANAC46              <---------ARR11(3)    <---------WOX13(1) --->ANAC58   --------->ZAT18           --------->ANAC46  --------->ARR11(3) <---------YAB1 >YAB1        <---------ZAT14          ------>ZmHOX2a(1) --------->CCA1(1)--------->ICU4 >ATHB12      --------->ZAT14   <---------CCA1(2)     <---------AHL20(2)  <---------ATHB51 -ICU4   --------->YAB1     <---------ANAC58         --------->AHL20(2)--------->AHL20(2)         <--   caacctttgaataatgttcactgccatgtttcgtaaatctcctcgctataccatatataatatctatacttgattaattatgactgatctctaacttctt  6120700                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                          --------->At4g35610                                                                                        =============                                                                                ----------->ARR10----                                                                               <---------------AGL15                                                                               --------------->AGL15                                                                              <-----------------AG                                                                              ----------------->AGL1                                                                              <-----------------AGL1                                                                        <-----------HVH21 <---------At4g35610                                                                      <-------MYC2      <--------P                                                                      ------->MYC3<---------ARR14(2)                     <---------AHL20(2)                               ------->MYC2--------->ARR14(2)                   <---------RVE1(1)                            =====================================            --------->ATHB12                                    <--------P    ----------------->AGL2            --------->YAB1                                 --------->MYB52(1) <-----------------AGL2            -------->HAHB4                       <---------ATHB12     <-------MYC3<---------GLK1(2)           <---------YAB1                     =================================================MADS_MADS           --------->ICU4      <---------ATHB12--------->WOX13(1)  <---------ANAC58   <------MYB46(1)         --------->YAB1  <-----------GT1      <---------------AGL15<---------ANAC46   <------MYB83        <---------AHL20(2) ------------>CBF  <-----------------AGL1<---------AtLEC2  --------->MYB111(1) --------DOF2    <------ZmHOX2a(1)           ----------------->AGL1<---------ANAC58  --------->MYB59   ctttttgtatataatgataggattttttttccaatggataagtctattccaatcaaggcaataccggttgcatgtgtcagaccagatttggtagatgacg  6120800 --->TGA1a ----O2 --->O2 --->TGA2(1) ----TGA1a ----bZIP60(2) ----bZIP60(1) --->bZIP60(1) ----ANAC55(1) ----ANAC58 --->ANAC55(2) ----ANAC58 ----ANAC46                                                           ------>ZmHOX2a(1) ----ANAC55(2)                                                  --------->ARR11(3) ---->STF1                                                      <---------ARR11(3) --TGA2(2)                                                   ----------->RAV1(1)       <---------ALFIN1 -->TGA1                                                <---------At4g35610         <---------ALFIN1 -->HVH21                                               ----------->RAV1(2)      <---------TCP20 ====MYC_MYB                     <-----------GT1        --------->At4g35610      --------->PCF5 ------->HVH21        <<<<<<<<<<<<<<<<<LFY   --------->MYB46(3)--------->REM1(1) <---------TCP15(1) ====MYC_MYB          ------>ZmHOX2a(1)<-----------ARR10=================RAV     --------->PCF2   ---   tgaccaaaaacacatcaacgattcctacaatggtttcaccagttctaaccaatatgccatctgcaacatctcctcttctaatggtcccacctcttcgaac  6120900                                                                                     --------->YAB1 -                                                                                     <---------ICU4--                                                                                  --------->YAB1 ----                                                                        <---------SPL7<---------TOE2(3)                                                                        <-----------HVH21        ----                                                                       <---------ANAC58<---------YAB1                                                                       <---------ANAC58<---------ATHB12                                          <---------HSFB2a(2)         <---------HSFC1(2)         ----              --------->ANAC46     <---------ANAC58                   --------->HSFC1(2)-------->HAHB4              --------->ANAC58     <---------ANAC58                   --------->HSFB2a(1)       -----              --------->ANAC58   --------->GLK1(2)                    <---------HSFB2a(1)     -------        --------->MYB46(3)     <---------GLK1(1)            --------->YAB1--------->SPL7--------->YAB1       --------->AtLEC2        <---------At4g35610       --------->WOX13(1)      --------->ZAT6 <---- ------>GLK1(2)        --------->SPL7     ------>ZmHOX2a(1)<---------ATHB12    --------->YAB1 <------   aatctggccatccaacaaggaatggtacgatggagatgctggtcctagtagtactggtccaatcaaacgagaagcgtccgataatactaatgatacagca  6121000                                                                                                   --                      --------->ARR14(2)                                                          ---                      <---------ARR14(2)                                                   <---------ANAC58 ---------->RAV1(1) --------->LBD16                                                        <---------ANAC58 ------->ANAC46    <---------HSFB2a(2)                                                    <---------ZAT2 ----->ANAC58      --------->HSFB2a(2)                                                    <---------At4g35610 ----->ANAC46     <-----------------AGL1                                              --------->LBD16 ----->ANAC58     ----------------->AGL2         <----------ID1                      <---------ANAC58 ---->ZAT14      ------>ZmHOX2a(1)         <---------YAB1                            <---------ANAC58 -->At4g35610<---------ALFIN1         --------->YAB1                      <---------YAB1 --------->ALFIN1 -----ZAT18------->TEIL    <-----------HVH21  <---------MYB52(1)  --------->ANAC58   <---------ANAC46 ---At4g35610--------->DEAR3(1)      <---------ATHB12 --------->O2--------->ANAC58  <---------LBD16--   cacaacacatttgcacctcctccagaaatggtcataccactgatcaccattaggccaagtgatgactctagcaactattcttgtgatgcgggtgctggtc  6121100                                                                  --------->DEAR3(1)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                      ----------->GT1           --------->At4g35610                                     --------->DAG2             ------>NtERF2                                 --------->AtMYB61             --------->ARR14(2)                              ------>NtERF2                    <---------ARR14(2)                              --------->ORA47(1)              --------->ATERF1(1)                             --------->DEAR3(1)              <---------ATERF1(1)                            --------->ATERF1(1)            <------NtERF2                           <---------ATERF1(1)            ------>NtERF2 --------->ANAC58                         --------->ALFIN1                 <---------ATERF1(1)                        <---------ATERF1(1)               --------->MYB52(1)                        -                       <---------ANAC58                  --------->DEAR3(1)                       <--             ---------->DOF2--------->DEAR3(2)           ----------->HVH21                      -----          ----------->GT1--------->ATERF1(1)            --------->RAP2.3(1)  ---------->DOF2  ------- ------->TOE2(1)       <---------bZIP60(2)             ------->GAMYB    --------->ANAC58    --------- --->ZmHOX2a(1)        <---------ANAC58  <-------TEIL --------->DEAR3(1)<----------ID1      --------- ------->TOE1(1)     ------>NtERF2 ---------->DOF2    --------->ANAC46---------->DOF2    ------>ZmHOX2a(2)   ctagtactggtccagtaaaacgaggccgtggccgaccaaaaggttcaaaaaactcaacgccgacggagccgaagaagccaaaagtatatgatcccaacag  6121200  Previous    Next  AGI:  At1g17770.1    Description:  SUVH7 (SU(VAR)3-9 HOMOLOG 7); histone-lysine N-methyltransferase/ zinc ion binding. Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 (SUVH7) [Arabidopsis Thaliana] (GB:Q9C5P1;GB:Q9LMU9); similar to SDG21 (SET DOMAIN GROUP 21) [Arabidopsis thaliana] (TAIR:AT2G24740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46198.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637); Range:  from: 6120734    to: 6122815    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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