Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ALFIN1     <---------ALFIN1     ----------->RAV1(1)                                                       --------->TOE2(3) ---->LBD16        ------->TEIL                                              ------->TEIL           - >GLK1(2)        ------->GAMYB                                 <-----------ARR10                    - -ARR14(2)      <---------MYB52(2)                           --------->LBD16 -------->P             - >ARR14(2)      --------->MYB46(3)     --------->ZAT6 <---------YAB1        <-----------GT1      <---   aaaactcccacactttcaacgaacttgaatgctctgaatcaacactagtccaagttttcattccgaaactactcttatcaacctcactgttcttctgcat  5513500            <---------YAB1                                                       --------->LBD16          --------->YAB1                           --------->CCA1(2)        <---------GLK1(1)         --------->ICU4                           <---------ARR11(3)   <---------MYB52(1) -------->ANAC58                   --------->AtMYB61                  <-------GAMYB<---------ZAT6 -------->ANAC58                  --------->MYB46(3)                 <---------ANAC58 -------->ANAC46         <---------At4g35610      --------->ARR11(1) <---------ANAC58 <-----------GT1 ------REM1(2)     <-----------HVH21----------->RAV1(1)     ----------->GT1 --------->GLK1(1)    ----   acacgcttgcagtgatgactgcttcagagctgttcgaccaccagttgagaaagatttgaaatttgtaacttccgttggaaacccagagttacccttcatc  5513600                                                                 <---------GLK1(2)                                                              <---------ALFIN1                                                             <------NtERF2                                                            ------>NtERF2                                                            ----------->RAV1(1)                                                           <---------ETT(2)                                                           ----------->HVH21                                                           --------->DEAR3(1)                                                          --------->RAP2.3(1)            <---------ANAC58                                                         <---------ATERF1(1)             <---------ANAC46                                                         ------>NtERF2              <----------DOF2                                <---------ARR14(2)       --------->LBD16           <---------DAG2   -         ---------->DOF2        --------->ARR14(2)      <---------DEAR3(1)    ------>ZmHOX2a(1) ----- ----->ATHB12               --------->LBD16            <---------LBD16  ------>ZmHOX2a(1)<---------ANAC58   gattgagacttcaaagctcgatctagtttccgagtttccacagaggtagagactttctccggcgacacattctccttatcctctcccttttgagtggata  5513700                                                                                        <---------AtLEC2                                                                                      --------->HSFB2a(2)                                                                               ----------------->AGL1                                                                 ------>MYB83  <-----------------AGL2                                                                 ------>MYB46(1)      <---------HSFB2a(2)                                                                --------->ANAC58     <---------LBD16                                                         --------->HSFC1(1)    ----------------->AG                                                         <---------HSFB2a(2)   <-----------------AGL1                                                         --------->HSFB2a(2)   ----------------->AGL2                                                    <---------DAG2            ---------->ID1      <--                                        --------->MYB46(3)      --------->ANAC58  <----------DOF2<---                                   ------>ZmHOX2a(1)<----------DOF2           <-----------GT1    <---                               <-----------GT1--------->WOX13(1)--------->ANAC46<---------------AGL15 -------->ARR11(3)        <---------MYB52(1)<---------ATHB12  --------->MYB46(3)--------------->AGL15 ----->DOF2         --------->GLK1(1) ----------->RAV1(1)<---------HSFC1(1)  <-----------GT1  <------   aagaccctgtaattgtgtccacatttcccttattttcctccaacaaatcattcacttttctcgaaccagccatgttttttttccctttctggatggattg  5513800                             <---------At4g35610                             --------->At4g35610                             <---------ZAT2                        <---------HSFB2a(2)       <---------GLK1(2)                        --------->HSFB2a(2)       <---------ARR11(3)                       <---------LBD16            --------->ARR11(3)                    <----------DOF2         <---------YAB1                        ----------->HVH21 --------DOF2      <---------HSFB2a(1)     <----------DOF2                <-----------RAV1(2) ------ANAC58      --------->HSFB2a(1)  --------->ARR11(3)          --------->HSFB2a(2)   *TSS ------ANAC58      --------->HSFC1(2)   <---------ARR11(3)          <---------HSFB2a(2)  --------->YAB1 ---WOX13(1)       <---------HSFC1(2)  <---------CCA1(2)         ------->TEIL --------->ALFIN1   ctttcaagtatcaagtttagaactttctgggagctaagtttatatctttatagattttgaagacatgaatctagaaacaggtgtttgacaatggtactga  5513900                                                                   <---------ANAC58             <---------YAB1                                        <---------ANAC58            <-----------TBP                                  <------------CBF      --------->MYB52(1)                                <---------------ANT                   -------      <-----------GT1   <---------ALFIN1              <------------CBF<---------ZAT2   <-----------RAV1(2)    <---------MYB52(2)  ----------->RAV1(1)        >>>>>>>>>>>>>>>>>LFY         ---------->DOF2 ---------->DOF2 ---------->DOF2<-----------GT1    <<<<<<<<<<<<<<<<<LFY        --------->TOE1(2)<----   gttgaaagtaacgtttttataaagtcccacagtgtttccatttgaatttgaatagccattggggattgtgcgagcacagaaccaaagacacagatggact  5514000                                                                                   <---------WRKY38(1)                                                                                  --------->WRKY18(1)                                                                                 --------->At5g28300                                                                                ------->GAMYB                                                                                ----------->GT1                                                                             --------->MYB52(1)                                                                             ------>MYB83                                                       <---------DAG2      --------->MYB46(3)                                                       <----------DOF2     <---------MYB55(2)                                                    ---------->ID1        --------->ANAC58                                                  <-----------GT1         --------->ANAC58     <---------ANAC58                       <------MYB83                 ------->TEIL     --------->ANAC58     <---------ANAC58                       <------MYB46(1)           --------->ANAC46    --------->ANAC46 <----------DOF2                           <---------AtMYB61         <---------LBD16      --------->ANAC58 >TEIL               <---------TOE2(3)    <---------MYB55(1)    <----------DOF2--------->MYB46(3) ------DOF2        ---------->DOF2       <---------MYB52(1)  <-----------GT1 ------>MYB46(1)   tttcttttcttgtcttaaacacaaaggttttttagatgtctgcgtttggtttttgccctttttctactttctacggacccaacggtcaatacacgatagt  5514100                                  <------NtERF2                         ----------------->AGL1            --------->AHL20(1)   <---------HSFB2a(2)  <---------WOX13(1)  --------->ARR14(2)            <---------AHL20(1)   --------->HSFB2a(2)--------->ATHB12   --------->LBD16            <---------AHL20(2)  --------->ETT(1)   <---------YAB1     <---------LBD16            --------->ARR11(3)  <---------LBD16    --------->ICU4     <---------ANAC46          <---------TOE2(3)<----------DOF2---------->DOF2            <---------LBD16      --------->ANAC58       <---------WOX13(1)<-----------------AGL1<--------P     <---------TOE2(3)           --------->ANAC46    <---------YAB1---------->ID1<---------ANAC46<-------TEIL  <---------TOE1(3)           --------->ANAC58   gggattttgattaatattttgtcgttttcctttgtcgggaaactgaaaggttgatgattggattgaggtttagcgggaactgtgtttcaaacactcaaac  5514200                     <---------MYB52(1)                    <---------RAP2.6(3)         <---------MYB52(1)                   <---------ANAC46            <---------RAP2.6(3)                 ------>MYB46(1)              <---------ANAC58              ----------->RAV1(2)             <---------ANAC58             -------->P <-----------TBP       <---------ANAC46                       --------->ARR14(2)            ------->GAMYB              <-----------TGA1                        --------->ANAC58           <---------MYB111(2)         <-----------HVH21                       --------->ANAC58           --------->MYB46(3)         --------->ANAC46                       ---------->DOF2  ------- ---------->DOF2 ------>MYB83         --------->bZIP60(2)         --------->AtLEC2   <---------ARR14(2)   acttaaagtatcaacaacctgccgttttttatatttatcaacgtcatgccgttttatcttcgtgagtcatccaaaaccgataagccagagcctcaaacca  5514300                                                                                --------->YAB1           <-----------GT1                                                   --------->YAB1           *TSS                                                             <---------YAB1       <-------GAMYB                 ------->GAMYB   --------->RAP2.6(2)  --------->ATHB51      <---------MYB46(3)             --------->AtMYB61                    <--------HAHB4      ----------->GT1               --------->MYB46(3)                    <---------ICU4     <---------ANAC46              ------>MYB83     --------->ZAT18       --------->YAB1    ---------  --------->ALFIN1                 -------->P     --------->ANAC58       <---------YAB1     --------- -->MYB46(3)       <---------ZAT6  ------>MYB46(1)--------->ANAC58       --------->ICU4   ---------->DOF2   tcgagtggctgttaaaccatactgttcaaattagtccaaccaaaaccatgagaggccacaacatcgtcgaagcccattattatcaccatggctaaagcca  5514400  Previous    Next  AGI:  At1g16070.1    Description:  AtTLP8 (TUBBY LIKE PROTEIN 8); transcription factor. Identical to Tubby-like protein 8 (TULP8) [Arabidopsis Thaliana] (GB:Q9S9M8;GB:Q8L848); similar to AtTLP6 (TUBBY LIKE PROTEIN 6), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G47270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62178.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007) Range:  from: 5511867    to: 5513890    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16080.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94042.1) Range:  from: 5514311    to: 5516021    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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