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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     ------>ZmHOX2a(2)
                    <------ZmHOX2a(2)
               <---------LBD16
               <-------MYC3
               ------->MYC3
             <---------LBD16
         --------->ARR14(2)
         <---------ARR14(2)                               ---------->DOF2
         <---------ARR11(3)  ---------->DOF2      <---------ANAC55(2)                            <--
  --------->DAG2   --------->ARR14(2)             --------->ANAC55(2)                           ----
 ---------->DOF2   <---------ARR14(2)         <---------ANAC46   <---------TOE2(3)        <---------
----->AHL20(2)--------->ANAC46         --------->ZAT14 --------->ZAT6        <-------TEIL--------->WOX13(1)
 
tacataaggcaatatccacgcggatcggagattaaagaatacttcagtcgcttatgtaacacaaagttaatgtaatgaagttcataactcatcagtcacc  4556500
                                <---------ANAC55(2)
                                --------->ANAC55(2)
                               <---------ICU4
                      --------->HSFB2a(2)                              <---------ARR14(2)          -
                      <---------HSFB2a(2)                              --------->ARR14(2)          <
                   --------->GLK1(2)                   <---------AtMYB61     <---------ARR11(3)   --
   ----------->GT1<---------GLK1(2)          <----------DOF2        --------->ANAC55(2)           <-
---------HVH21  ----------->ARR10  <-----------GT1 <----------DOF2  <---------ANAC55(2)           --
----->ANAC46--------->ATHB12   --------->YAB1<---------DAG2        <---------ICU4                 <-
--HVH21<---------AHL20(2)     <---------ATHB12   ---------->ID1   --------->ICU4<----------DOF2  ---
 
agtcacaagttaaattgattagattctagaccaataagtatccatctcctttttctttttggtcgtctaataagtatccagttctttgcattttgacaaa  4556600
           ------>MYB46(1)
           ------>MYB83
         --------->TOE2(3)
         <---------MYB46(2)
         <---------MYB59
        --------->ANAC55(2)
        <---------ANAC55(2)
      <-----------GT1                       <---------ALFIN1
  <---------AHL20(2)                  --------->KAN4(2)
  --------->AHL20(2)                 --------->KAN4(1)                          --------->ANAC58
  <---------AHL20(1)                 <---------KAN4(1)                   --------->ANAC46
  --------->AHL20(1)                <---------KAN4(2)                 --------->ANAC58
-------->AHL20(2)                   ---------->TaMYB80                --------->ANAC58
---------AHL20(2)               --------->ANAC55(2)                <---------ZAT2
------->AHL20(1)                <---------ANAC46                   --------->ZAT2
--------AHL20(1)                <---------ANAC55(2)                <---------STY1(2)
------->AHL20(2)               <---------LBD16 --------->MYB46(3)  --------->STY1(2)  --------->AHL20(2)
--------AHL20(2)         --------->YAB1  <-----------GT1       --------->STY1(2)--------->ANAC46
------>AHL20(2)   ---------->DOF2--------->LBD16               <---------STY1(2)--------->ANAC58
 
attaatttattacctaattaacaaagaatcacattgcggaatattcaccactcaccatctactactagctagctagccacaacaagacataaaatcaaat  4556700
                                                      <---------RAP2.6(3)
                             --------->ATHB12         ------>NtERF2
                            <---------YAB1           --------->DEAR3(1)
                        --------->ANAC58            --------->DEAR3(2)   --------->WOX13(1)
                        --------->ANAC58     ----------->HVH21         <---------ATHB12
                        --------->ANAC46   --------->ANAC58          <-----------GT1               <
                --------->AHL20(2)         --------->ANAC58         <---------AHL20(2)  ------>ZmHOX2a(2)
                <---------AHL20(2)       <-----------GT1       ------->TEIL --------->YAB1------>ZmHOX2a(1)
 
tggttttataaacatataaaaaaataaacgcatgattcgtcttgtaacgcgacgggccgacttatgcatttttaatcactcaaaatactgatcctagagg  4556800
                   ----------->TBP <---------AHL20(2)<---------AHL20(2)
                   --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)
                 ----------->TBP <---------AHL20(2)<---------AHL20(2)
                 --------->AHL20(2)--------->AHL20(2)----------->TBP
               --------->AHL20(2)----------->TBP ----------->TBP
               <---------AHL20(2)--------->AHL20(2)----------->TBP
             --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)
             <---------AHL20(2)----------->TBP <---------AHL20(2)
             ----------->TBP --------->AHL20(2)--------->AHL20(2)
           --------->AHL20(2)<---------AHL20(2)----------->TBP
           <---------AHL20(2)----------->TBP --------->AHL20(2)
           ----------->TBP <---------AHL20(2)----------->TBP ----------->TBP
         --------->AHL20(2)----------->TBP <---------AHL20(2)--------->AHL20(2)
         <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)
         ----------->TBP <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)
       ----------->TBP --------->AHL20(2)----------->TBP --------->AHL20(2)
       --------->AHL20(2)----------->TBP <---------AHL20(2)--------->AHL20(2)
       <---------AHL20(2)--------->AHL20(2)----------->TBP ----------->TBP
     ----------->TBP --------->AHL20(2)--------->AHL20(2)----------->TBP
     <---------AHL20(2)----------->TBP ----------->TBP ----------->TBP
     --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)<---------AHL20(2)
   <---------AHL20(2)----------->TBP <---------AHL20(2)--------->AHL20(2)
   --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)<---------AHL20(2)
   ----------->TBP <---------AHL20(2)----------->TBP --------->AHL20(2)
 ----------->TBP <---------AHL20(2)----------->TBP --------->AHL20(2)
-----------TBP ----------->TBP --------->AHL20(2)--------->AHL20(2)                     *TSS    ----
 
ccttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagagagagagcctgatatatatgtattgat  4556900
                                                                             ---------->DOF2
                                                                       --------->ATHB12
                                                                       <---------ICU4
                                                                      <---------YAB1
                                                                      --------->ICU4
                                                                    <---------ICU4
                                             <---------YAB1         --------->YAB1
                                            --------->AHL20(2)     --------->ICU4
        --------->ANAC58           --------->DAG2                  <---------YAB1
        --------->ANAC58         ---------->DOF2                 --------->YAB1
      ---------->DOF2  --------->TOE2(3)    <---------AHL20(2)  <---------YAB1--------->DAG2
-->ZmHOX2a(2)  <----------ID1 --------->AHL20(2)          ---------->DOF2 --------->AHL20(2)
 
ccctctctctaaagcaaaaaaacaaatctcaaaataaaaaggtggattaaaattaagtccctaaagtatcatcatgattaaaaagttcagcaatatggat  4557000
                                                                                           <--------
                   --------->ALFIN1             <---------ARR14(2)                         <--------
                 <---------O2                   --------->ARR14(2)                         <--------
                 --------->ALFIN1              <------ZmHOX2a(1)                       <----------DOF2
     <---------ARR14(2)                <---------HSFB2a(2)         ------->TEIL      ------>ZmHOX2a(1)
     --------->ARR14(2)       <---------------------WRI1     <-------TEIL   --------->DOF5.7(2) ----
 
tacaaccagaaacgagagagatgtgggcaatacatcgaagccctcgaagaggaacgtcgcaagattcatgtatttcaacgtgaacttcctctttgcttag  4557100
                                               --------->YAB1
                                          <<<<<<<<<GATA-1
                                   <---------AHL20(1)
                                   --------->AHL20(2)
                                   <---------AHL20(2)
                                   --------->AHL20(1)
-ANAC46                            --------->ARR11(3)                   ----------->GT1        <----
-ANAC58                            <---------ARR11(3)             --------->TOE2(3)         <-------
-ANAC58           --------->AHL20(2)<---------AHL20(2)           --------->REM1(1)     ------>ZmHOX2a(2)
----->ARR11(3)----------->GT1 --------->AHL20(2)        <---------AHL20(2)           --------->ARR11(3)
 
accttgtaactcaaggtatgtataaatatacaatgaaatatatttatctataaaaacatatatttgctacatcaaatgtaaaatttgtgatctatttttt  4557200
                    --------->ARR11(3)
                    <---------ARR11(3)
                    --------->AHL20(2)
                    <---------AHL20(1)
                    <---------AHL20(2)
                    --------->AHL20(1)                ------->TEIL
              <-----------GT1                         <-------TEIL
        --------->YAB1                             <---------ANAC58
       --------->AHL20(2)                          <---------ANAC58
    <---------AHL20(2)                             <---------ANAC46
   --------->AHL20(2)            --------->GLK1(2)<---------------AtSPL8                        ----
   <---------AHL20(2)<---------AHL20(2)           --------------->AtSPL8                        ----
-------GT1 <---------ICU4   --------->YAB1        --------------->AtSPL3 <---------AHL20(2)   <-----
--AHL20(2)--------->ICU4   <---------YAB1     --------->YAB1<-----------GT1             <------ZmHOX2a(2)
 
tctaaattaaataaaaattacaatatatttatgaaaattctagtatgtatagtaacgtacattttaccatttccatattatttcttaagcgatcgaggca  4557300
                                <---------------AtSPL3           --------->MYB52(1)
                                <---------------AtSPL8         ----------->HVH21
                     --------->ETT(2)                         --------->SPL7
                  ----------->HVH21                          --------->At4g35610
                  ----------->TGA1                        --------->ZAT2       <---------PCF2
                <---------At4g35610        -------->P     <---------ZAT2    --------->ALFIN1
           <---------LBD16     <------------------SPL14   <---------At4g35610  --------->PCF5
          <---------At5g28300 --------->ARR14(2)          --------->At4g35610 ----------->TCP11(1)
----->ANAC58    --------->At4g35610 ------->TEIL   --------->ZAT18        <-----------RAV1(1)
----->ANAC58 --------->LBD16  --------->GLK1(2)    --------->ZAT14       --------->GLK1(2)
----ANAC46--------->MYB52(1)  <---------ARR14(2)   <---------ZAT14  --------->LBD16        <--------
 
tgtaagagggagttaccggagatgacgacggagaatatgtacggacaaccagagtgctcggagcagacgaccggagaatgtgggccggtcttggagcagt  4557400
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AGI:  At1g13300.1   
Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G25790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42100.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:  from: 4556889    to: 4558705    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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