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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
LBD16
<-------
MYC3
------->
MYC3
<---------
LBD16
--------->
ARR14(2)
<---------
ARR14(2)
---------->
DOF2
<---------
ARR11(3)
---------->
DOF2
<---------
ANAC55(2)
<--
--------->
DAG2
--------->
ARR14(2)
--------->
ANAC55(2)
----
---------->
DOF2
<---------
ARR14(2)
<---------
ANAC46
<---------
TOE2(3)
<---------
----->
AHL20(2)
--------->
ANAC46
--------->
ZAT14
--------->
ZAT6
<-------
TEIL
--------->
WOX13(1)
tacataaggcaatatccacgcggatcggagattaaagaatacttcagtcgcttatgtaacacaaagttaatgtaatgaagttcataactcatcagtcacc
4556500
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
ICU4
--------->
HSFB2a(2)
<---------
ARR14(2)
-
<---------
HSFB2a(2)
--------->
ARR14(2)
<
--------->
GLK1(2)
<---------
AtMYB61
<---------
ARR11(3)
--
----------->
GT1
<---------
GLK1(2)
<----------
DOF2
--------->
ANAC55(2)
<-
---------
HVH21
----------->
ARR10
<-----------
GT1
<----------
DOF2
<---------
ANAC55(2)
--
----->
ANAC46
--------->
ATHB12
--------->
YAB1
<---------
DAG2
<---------
ICU4
<-
--
HVH21
<---------
AHL20(2)
<---------
ATHB12
---------->
ID1
--------->
ICU4
<----------
DOF2
---
agtcacaagttaaattgattagattctagaccaataagtatccatctcctttttctttttggtcgtctaataagtatccagttctttgcattttgacaaa
4556600
------>
MYB46(1)
------>
MYB83
--------->
TOE2(3)
<---------
MYB46(2)
<---------
MYB59
--------->
ANAC55(2)
<---------
ANAC55(2)
<-----------
GT1
<---------
ALFIN1
<---------
AHL20(2)
--------->
KAN4(2)
--------->
AHL20(2)
--------->
KAN4(1)
--------->
ANAC58
<---------
AHL20(1)
<---------
KAN4(1)
--------->
ANAC46
--------->
AHL20(1)
<---------
KAN4(2)
--------->
ANAC58
-------->
AHL20(2)
---------->
TaMYB80
--------->
ANAC58
---------
AHL20(2)
--------->
ANAC55(2)
<---------
ZAT2
------->
AHL20(1)
<---------
ANAC46
--------->
ZAT2
--------
AHL20(1)
<---------
ANAC55(2)
<---------
STY1(2)
------->
AHL20(2)
<---------
LBD16
--------->
MYB46(3)
--------->
STY1(2)
--------->
AHL20(2)
--------
AHL20(2)
--------->
YAB1
<-----------
GT1
--------->
STY1(2)
--------->
ANAC46
------>
AHL20(2)
---------->
DOF2
--------->
LBD16
<---------
STY1(2)
--------->
ANAC58
attaatttattacctaattaacaaagaatcacattgcggaatattcaccactcaccatctactactagctagctagccacaacaagacataaaatcaaat
4556700
<---------
RAP2.6(3)
--------->
ATHB12
------>
NtERF2
<---------
YAB1
--------->
DEAR3(1)
--------->
ANAC58
--------->
DEAR3(2)
--------->
WOX13(1)
--------->
ANAC58
----------->
HVH21
<---------
ATHB12
--------->
ANAC46
--------->
ANAC58
<-----------
GT1
<
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
------>
ZmHOX2a(2)
<---------
AHL20(2)
<-----------
GT1
------->
TEIL
--------->
YAB1
------>
ZmHOX2a(1)
tggttttataaacatataaaaaaataaacgcatgattcgtcttgtaacgcgacgggccgacttatgcatttttaatcactcaaaatactgatcctagagg
4556800
----------->
TBP
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
----------->
TBP
--------->
AHL20(2)
----------->
TBP
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
----------->
TBP
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
--------->
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
----------->
TBP
--------->
AHL20(2)
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----------->
TBP
--------->
AHL20(2)
----------->
TBP
--------->
AHL20(2)
--------->
AHL20(2)
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
----------->
TBP
----------->
TBP
----------->
TBP
--------->
AHL20(2)
--------->
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
----------->
TBP
----------->
TBP
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
--------->
AHL20(2)
----------->
TBP
<---------
AHL20(2)
----------->
TBP
--------->
AHL20(2)
-----------
TBP
----------->
TBP
--------->
AHL20(2)
--------->
AHL20(2)
*
TSS
----
ccttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagagagagagcctgatat
atatgtattgat
4556900
---------->
DOF2
--------->
ATHB12
<---------
ICU4
<---------
YAB1
--------->
ICU4
<---------
ICU4
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
--------->
ANAC58
--------->
DAG2
<---------
YAB1
--------->
ANAC58
---------->
DOF2
--------->
YAB1
---------->
DOF2
--------->
TOE2(3)
<---------
AHL20(2)
<---------
YAB1
--------->
DAG2
-->
ZmHOX2a(2)
<----------
ID1
--------->
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
ccctctctctaaagcaaaaaaacaaatctcaaaataaaaaggtggattaaaattaagtccctaaagtatcatc
atgattaaaaagttcagcaatatggat
4557000
<--------
--------->
ALFIN1
<---------
ARR14(2)
<--------
<---------
O2
--------->
ARR14(2)
<--------
--------->
ALFIN1
<------
ZmHOX2a(1)
<----------
DOF2
<---------
ARR14(2)
<---------
HSFB2a(2)
------->
TEIL
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------------------
WRI1
<-------
TEIL
--------->
DOF5.7(2)
----
tacaaccagaaacgagagagatgtgggcaatacatcgaagccctcgaagaggaacgtcgcaagattcatgtatttcaacgtgaacttcctctttgcttag
4557100
--------->
YAB1
<<<<<<<<<
GATA-1
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
-
ANAC46
--------->
ARR11(3)
----------->
GT1
<----
-
ANAC58
<---------
ARR11(3)
--------->
TOE2(3)
<-------
-
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
--------->
REM1(1)
------>
ZmHOX2a(2)
----->
ARR11(3)
----------->
GT1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
accttgtaactcaag
gtatgtataaatatacaatgaaatatatttatctataaaaacatatatttgctacatcaaatgtaaaatttgtgatctatttttt
4557200
--------->
ARR11(3)
<---------
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
------->
TEIL
<-----------
GT1
<-------
TEIL
--------->
YAB1
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC46
--------->
AHL20(2)
--------->
GLK1(2)
<---------------
AtSPL8
----
<---------
AHL20(2)
<---------
AHL20(2)
--------------->
AtSPL8
----
-------
GT1
<---------
ICU4
--------->
YAB1
--------------->
AtSPL3
<---------
AHL20(2)
<-----
--
AHL20(2)
--------->
ICU4
<---------
YAB1
--------->
YAB1
<-----------
GT1
<------
ZmHOX2a(2)
tctaaattaaataaaaattacaatatatttatgaaaattctagtatgtatagtaacgtacattttaccatttccatattatttcttaag
cgatcgaggca
4557300
<---------------
AtSPL3
--------->
MYB52(1)
<---------------
AtSPL8
----------->
HVH21
--------->
ETT(2)
--------->
SPL7
----------->
HVH21
--------->
At4g35610
----------->
TGA1
--------->
ZAT2
<---------
PCF2
<---------
At4g35610
-------->
P
<---------
ZAT2
--------->
ALFIN1
<---------
LBD16
<------------------
SPL14
<---------
At4g35610
--------->
PCF5
<---------
At5g28300
--------->
ARR14(2)
--------->
At4g35610
----------->
TCP11(1)
----->
ANAC58
--------->
At4g35610
------->
TEIL
--------->
ZAT18
<-----------
RAV1(1)
----->
ANAC58
--------->
LBD16
--------->
GLK1(2)
--------->
ZAT14
--------->
GLK1(2)
----
ANAC46
--------->
MYB52(1)
<---------
ARR14(2)
<---------
ZAT14
--------->
LBD16
<--------
tgtaagagggagttaccggagatgacgacggagaatatgtacggacaaccagagtgctcggagcagacgaccggagaatgtgggccggtcttggagcagt
4557400
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AGI:
At1g13300.1
Description:
myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G25790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42100.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:
from: 4556889
to: 4558705
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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