Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ARR14(2)                                                                               <---------ARR14(2)                                                                          ------->GAMYB                                                                         <---------ATHB12                                                                        -------->P               ---------->DOF2                                          ------>MYB83              --------->LBD16                                           ------>MYB46(1)          <---          <---------ARR14(2)                                          ------->GAMYB              <---          --------->ARR14(2)                           --------->WOX13(1)--------->MYB46(3)   -------          --------->GLK1(2)                         --------->TOE2(3)--------->MYB46(3)   <---------WOX13(1)   <---------At4g35610                   ---------->DOF2           <-----------GT1  <---------ALFIN1   ttttcagataagaatccgaaagttcagactcagaacgcgaactcaaagcgctaacatcaatctcgttgttaaccaaccaagtatccacactgactgattt  4037900                          <---------HSFB2a(2)                          --------->HSFB2a(2)                         <---------ANAC46                     <---------ANAC58                     <---------ANAC58               <---------REM1(1)               <-----------RAV1(1)           <---------HSFB2a(2)     ------>ZmHOX2a(1)  <---------ZAT2                              <---------ICU4   ----------->RAV1(2)  --------->ZAT2                              --------->YAB1   ========================RAV                               <----------DOF2              <----------DOF2 ------ANAC58 --------->ARR11(3)                         --------->GLK1(1)   --------->MYB46(3) ------ANAC58 <---------ARR11(3)                         <---------CCA1(2)--------->MYB46(3) -->GLK1(1)--------->HSFB2a(2)                <---------MYB46(3) --------->YAB1      <<<<<<<<<TBF1   cttgctcctgcttcgagatgttgccttgctggaaggaactagttggagttgttgttcgcatttcttttcatcatcaacaacaacttcttcttctttccat  4038000                                                                                         <---------ANAC58                                                                                         <---------ANAC58                            <---------At4g35610                                      <---------ARR11(3)                    --------->GLK1(1)                                         <---------ANAC58                    <---------At4g35610                      --------->YAB1   <---------ANAC58                    <---------GLK1(1)        --------->ZAT14 <---------ICU4<----------DOF2              <-----------GT1       <---------YAB1        --------->YAB1 ------>ZmHOX2a(1)         <----------DOF2 ------>ZmHOX2a(1)   <---------REM1(2)      --------->GLK1(1)--------->ARR11(3)   gtagttgctctctttttaacagagctcctctgcttcttctcattctcttcacacttgttctcatcatcacatttcctctttcttgaagatttcgttttaa  4038100                    <---------ANAC58                    <---------ANAC58                  --------->ANAC46                 <---------ARR14(2)             --------->KAN4(2)                            --------                 --------->ARR14(2)            --------->HSFB2a(1)                  <---------ALFIN1                <---------MYB52(1)             <---------HSFB2a(1)                 --------->MYB46(3)       <----------DOF2              <---------ALFIN1  --------->ZAT6              ------->TEIL     --------->At4g35610   --------->ATHB12  <------ZmHOX2a(1)               <---------At4g35610  <---------At4g35610   <----------DOF2  --------------------->WRI1          --------->At4g35610   tctcatcagctttagaccgtttccgtctttgattagccactcgcttaggacattccacactaatctcttcttctatgtctgatgaaccactgctaagact  4038200                                                    ------>ZmHOX2a(1)                                                    <----------DOF2                                                   --------->TOE2(3)                                                --------->ARR11(3)                                 --                 <<<<<<<<<TBF1                  <---------ARR11(3)<---------ANAC58  --------->MYB52(2)   --------->TOE2(3)                           --------->CCA1(1)  <---------ANAC58<---------MYB52(1)  ----------------->AGL1                       --------->RVE1(1)<---------YAB1   <-------GAMYB    --- ->ZAT6    <---------MYB52(1)           ---------->DOF2 --------->ANAC46 --------->GLK1(2)     <-----   cgttgcctcaaccggtttcttcttctctggccaacaagtttctaaagaaatatcctttacaccattatgcttgagaatcactccgttagtagcaacttca  4038300                      ------------>CBF                                               <----------DOF2                     ------>MYB46(1)                                               <---------ATHB12                     ------>MYB83                                      <------------CBF                  --------->At4g35610    <-----------TGA1            --------->AHL20(2)         ------------>CBF                <-----------HVH21           <---------AHL20(2)        <-----------GT1               <---------ARR14(2)            --------->AHL20(2) ------->ANAC46   <---------At4g35610 --------->ARR14(2)            <---------AHL20(2) ------>MYB46(3)  ----------->RAV1(2)------>MYB46(1)                <---------AHL20(1) ------GT1      <-----------GT1      ------>MYB83              ------------>CBF------------>CBF   ccctccattttctcaatttcacctgccaattccataaccaaatcgtcagaaaattcaaattcagactcaatttaattggactccaatctttttctaatat  4038400                             <-------GAMYB                            <---------MYB46(3)                            --------->MYB111(2)                            --------->MYB55(2)                           <--------P                                    <----------ID1                          <---------ANAC58                  <----------DOF2            ---------->DOF2                   <---------YAB1      ------------>CBF     --------->TOE1(3)       ------>MYB83  ---    <---------TOE2(3)     <---------ANAC58                  --------->TOE2(3)       ------>MYB46(1)   caaactatggtttcacagattacgaatgggttgttgaatcaaacaatacagaggttttaaaactttaacatcacagagacaaaaccaaacaaagagatta  4038500                                                                             <-----------HVH21                                                                     --------->LBD16                                                                    --------->ANAC55(1)                                                                    --------->ANAC58                                                                    --------->ANAC55(2)                                                                    --------->ANAC46                                                                    <---------ANAC55(2)                                                ----------->RAV1(1) --------->ANAC58                                               --------->ANAC58    <---------LBD16                                               --------->ANAC58   --------->MYB52(1)                <                               <---------ARR11(3)            --------->AHL20(2)               ------- ------>ZAT6      ---------->DOF2 ----------->GT1           XXXXXXXXXXXXXXXXXXXX>MIR420       <------   acacgagtcaagaacagaataaaagtagaacaagaactgagaaaatgaaacgacagaaactaaaaaaatcacggaaatatgtcagagagagtagcatcat  4038600                                                                                                    -                                                                                                   <-                                                               <-----------HVH21               <-----     <---------YAB1                                 ------->GAMYB                              <----- <----------DOF2                            ------>ZmHOX2a(1) --------->LBD16               <-------- ---------DAG2                              --------->LBD16 <---------LBD16             <---------At4g35610 -->YAB1          <---------ATHB12   <---------ARR11(3)   --------->GLK1(2)           <---------GLK1(1) ---ICU4   --------->At4g35610       --------->ARR11(3)  <---------GLK1(2)--------->ALFIN1<---------MYB46(3)   cacctttctgattagctcaaatcaaacaaacacagaagagttcttcctggacaaccctagattccggtgagagacagtgaggcgatggatagctgttgag  4038700 ---------->RAV1(1)                                          <-----------RAV1(1) --------ETT(1)       <---------AHL20(2)          --------->CCA1(2)                               <-- ----ANAC58           --------->AHL20(2)         --------->ARR11(1)                       --------->AHL20(2) ----ANAC58          --------->AHL20(2)          --------->ARR11(3)           --------->GLK1(2) ----- -MYB52(1)---------->DOF2      --------->TOE1(2) <---------ARR11(3)  <----------DOF2      <---------AHL20(2)   tccgacatgaaacaaagaagaaatttaaaaaaacatgagattgtgaagaaagatatgtccgaaatgttgttctttaagagtttctgagagatttaaaaaa  4038800  Previous    Next  AGI:  At1g11950.1    Description:  transcription factor. similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G62310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44407.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347) Range:  from: 4034585    to: 4038308    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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