Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ANAC58      --------->ANAC46      --------->ANAC58    ------>ZmHOX2a(1)  ------>ZmHOX2a(2)                                                 --------->ALFIN1 <------ZmHOX2a(2)                                                <---------ANAC58 ---------ARR11(3)                                                <---------ANAC58 -------->AGP1                                                    <---------bZIP60(2) -------->ARR14(2)                                                <---------ANAC55(2) -------->ARR11(3)                                                --------->ANAC55(2) ---------ARR14(2)                                                <---------ANAC55(1) --------GLK1(1)                                         --------->MYB52(1)   --------->WOX13(1) ------->GLK1(1)                                        ------>ZmHOX2a(1)    <---------AHL20(2) -------->ARR10                                       ------>ZmHOX2a(2)      --------->AHL20(2) ---ANAC46                          ------------>MYB.PH3(1)       <---------ANAC46             <----- ---ANAC58--------->ANAC58        --------->AHL20(2)--------->ARR11(3)      --------->AHL20(2) ------ ---ANAC58--------->ANAC58      --------->TOE2(3)   <---------ARR11(3)      <---------ATHB12  -------   gagatcctaagcaagaaacatatatacttacaaacattaaacagttaccaagatgatcctaatggattacgtggtccaataaatcaaaccattgaaatta  3708900                                                           ------>ZmHOX2a(1) <----------DOF2   <---------ALFIN1          ---------->DOF2      ---------->DOF2        --------->MYB46(3) ----AHL20(2)              --------->YAB1    --------->ZAT14           <-----------GT1 --->AHL20(2)       <------NtERF2          --------->At5g28300       <---------MYB52(2)        ------ -->AHL20(2)    --------->AtLEC2      ----------->HVH21  --------->ZAT18-------->P       --------->ALFIN1   attccacacttcaattccaggcagagtaatcaaaagaaatgtgacagtaaacaaaagagtcctctaggtctactaaccactttgcatcagtgtgttccta  3709000                              --------->LBD16                             ------->GAMYB                           -------->P                           ------>MYB83                           ------>MYB46(1)                           --------->MYB52(1)                          --------->MYB55(1)                          --------->MYB52(1)                         --------->AtMYB61                         --------->MYB46(3)                                                        <-                        --------->DEAR3(2)                                                       ----                        --------->MYB46(3)                                                       <---                <-----------RAV1(2)                  <---------LBD16                             <--- --------->ANAC46      ------->TEIL        <---------ANAC58           ---------->DOF2            ---- --------->ANAC58 <---------At4g35610      <---------ANAC58      --------->WOX13(1)             ----- --------->ANAC58 --------->At4g35610 <---------ICU4----------->RAV1(2)                        ------ >ZmHOX2a(1)  ----------->RAV1(1)    --------->ICU4-------->P  <---------ATHB12      <------ZmHOX2a(2)   aactcgccagactctaccacagatgaaccaaccggagacattatttcttgactaacctggaagtaatcactcaaaagttcagtttcgatcagacgagaat  3709100       --------->HSFB2a(2)       <---------HSFB2a(2)                                                            <---------ARR14(2) --------YAB1                                                                         --------->ARR14(2) ---->ATHB1                                                                           --------->GLK1(2) -----HAHB4                                                                          <---------GLK1(2) ------ICU4                                                                        --------->LBD16 ----->YAB1                                                                       --------->HSFB2a(2) ---->ICU4                 ----------->RAV1(1)                                    <---------HSFB2a(2) --->GLK1(2)   <-----------GT1--------->TOE2(3)      --------->AtMYB61     <----------DOF2   --------   cattatagtccagaaattaagcatttgaacaacatcagtttttcaattggcgaaaccatacctccatagaaacagggctttcatccagaatccgataaat  3709200                               <---------At4g35610                               <------NtERF2                               --------->ATERF1(1)                               --------->At4g35610                              <---------ATERF1(1)                              ------>NtERF2                              <---------RAP2.3(1)                              <---------DEAR3(2)                             <---------DEAR3(1)                             <---------RAP2.3(3)                            --------->ATERF1(1)                            <------NtERF2                           <-----------HVH21                        <-----------HVH21                      ------>ZmHOX2a(1)                  --------->ARR11(3)                    --------->GLK1(1)                  <---------ARR14(2)        --------->ANAC58                  --------->ARR14(2)        --------->ANAC58                                    -----               --------->AHL20(2)------>NtERF2  ----------->RAV1(1)                             <----            --------->YAB1<---------DEAR3(1)--------->ANAC46                            ------>ZmHOX2a(1)           <---------ATHB12<---------ATERF1(1)  ------>NtERF2                       <---------ARR14(2) -->DOF2 --------->WOX13(1)<---------SPL7 ---------->DOF2 <---------ATHB12          --------->ARR14(2)   cgcctctatgtcaatcataaaatcctcgtcgtcggctccaaattcaaagccaccagagaaatcatccgcttgcgactgaaatactgaatccttcttactc  3709300                                                                                                 ----                                                                                                -----                                                                                                -----         <---------ALFIN1                                                                      <-----     --------->ANAC58                    --------->TOE2(3)                              <---------HSFB2a(1)     --------->ANAC58                    --------->TOE1(3)                              --------->HSFC1(2)    ------->TEIL                --------->GLK1(2)                         <---------ALFIN1    <------ ---->YAB1                    <------ZmHOX2a(1)                       --------->DEAR3(2)<---------HSFC1(2) -----ICU4                  <---------TOE2(3)   ----------->GT1     --------->MYB52(1)  --------->HSFB2a(1)   atgacgaacccaaaccctaagtctgagaataaggaatctaaaaccctaactcgaaaaaatccagcacaaaaaaccgacactcagagaagaagtttctccc  3709400                         <------NtERF2                        ------>NtERF2                       --------->At1g77200                                   <------MYB83                       --------->DEAR3(1)                                    <------MYB46(1)       <-                       ----------->HVH21                                    --------->MYB59       <-- ----->LBD16  --------->ANAC46     --------->CCA1(2)                   <---------ANAC46           --- ---->HSFB2a(2)       --------->RAP2.3(1)                ----------->GT1   <--------P            ---- ---->LBD16   --------->ANAC58    --------->ARR14(2)  <---------LBD16  <---------ANAC58        ------ ----LBD16    --------->ANAC55(1) <---------ARR14(2) --------->ALFIN1  <---------ANAC58  <----------ID1 ---LBD16     --------->ANAC58  ----------->GT1--------->HSFB2a(2)  --------->TOE1(2)   --------->DEAR3(2)   ggagaactagtcaaacacgaaatcgccgacgaagtggatacaaagacttcgcgatttgggggaaaaaaaacttgcgagtaggtttttggaaacgacgaat  3709500                                                             --------->LBD16                           <---------MYB46(3)      <---------YAB1                           --------->MYB111(1)    <-----------TBP        <-----------GT1             <---------HSFC1(2)            --------->ANAC46 --------->ATERF1(2)             <---------HSFB2a(1)         <-----------RAV1(2)<---------ANAC46 --------AHL20(2) <---------HSFB2a(2)   ------>ZmHOX2a(2)   <---------ATERF1(2) -------AHL20(2)  >>>>>>>ZML2      <---------KAN4(2)--------->YAB1----------->GT1 ------>AHL20(2)  --------->HSFB2a(2) --------->ARR11(3)    <---------DEAR3(1)                 ------ ----->YAB1  --------->HSFB2a(1)<---------ANAC46 <----------DOF2 <---------AtMYB61           -------- ->TEIL      --------->HSFC1(2)<---------LBD16------>NtERF2<---------LBD16                <----------ID1   tttaatttgagaagaaggttctagagtagtagttggggatgatccaggcgacttttatagtgccggtgaggtttttttcttctctctgaaatgggaaaag  3709600                   --------->AHL20(2)                                     --------->ANAC58                <---------ARR14(2)                                        --------->ANAC46              <---------TOE2(2)                                           --------->ANAC58           --------->ANAC58                            <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)    ---------->DOF2<---------AHL20(2)              ---------->ID1       --------->ZAT6 --->DAG2  --------->ANAC58     <-----------HVH21 <------------------------ANAC81   <----------DOF2 -->DOF2 --------->CCA1(2)  --------->MYB52(1) <----------DOF2        <-----------GT1        <-------   gtaagagaaagagacgcagatttaaataagaaacggtcgaagaagttggctttgtttttttttttttttttttaacacgaagttggctttgttttctttg  3709700                               <---------ICU4                       <---------YAB1                    <---------YAB1          <---------ARR11(3)                                  <----                    <---------AHL20(2)     <---------CCA1(2)                                    <----                 --------->AHL20(2)     <---------MYB52(1)                                      <----                 <---------AHL20(2)    <-------GAMYB       --------->AHL20(2)                 <------                --------->AHL20(2)    ----------->GT1      <---------AHL20(2)                --------                <---------AHL20(2)   <------NtERF2     <---------AHL20(2)            <---------AHL20(2)                <---------AHL20(1) --------->ANAC46    --------->AHL20(2)  ---------->DOF2   --------           <<<<<<<<<<WRKY43    --------->YAB1 --------->YAB1 <---------TOE2(3)    ----------->GT1           <<<<<<<<<<WRKY38   <---------ATHB12--------->TOE2(3)         ----------->RAV1(1)<---------At4g35610 ---DOF2   <<<<<<<<<<WRKY26   --------->ICU4--------->ARR11(3)       --------->HSFB2a(2)   --------->At4g35610   tatttttgtattggtcaatttttttattagtaatcatgcgccgttatatcttaatttttaattaatgttttctgcaacaaagtatagttaatttgctgac  3709800  Previous    Next  AGI:  At1g11100.1    Description:  SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related. similar to EDA16 (embryo sac development arrest 16) [Arabidopsis thaliana] (TAIR:AT1G61140.3); similar to EDA16 (embryo sac development arrest 16), ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G61140.1); similar to EDA16 (embryo sac development arrest 16) [Arabidopsis thaliana] (TAIR:AT1G61140.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44997.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42784.1); similar to unnamed protein product [Vitis vinifera] (G Range:  from: 3703691    to: 3709302    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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