Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                              <---------------AGL15                                                                    <---------GLK1(2)         -------                                                                    --------->ARR11(3)        -------                                      --------->YAB1                <---------ARR11(3)        <------        <-------TEIL      --------->YAB1<---------YAB1        --------->ZAT6 ----------------->AGL2 -----At4g35610  <---------ATHB12 <-------TEIL<-----------------------TaNAC69(2)    --------->YAB1   ctcattagcattcattctaatcactgaatcacaagtttcatcaaaattgacctgcattgtcaaaacactagattttcaaactaaaatcagaaattgagca  2925300                                                                        <-----------GT1                                                                     ------>MYB46(1)                                                                     ------>MYB83                                                                   ------->GAMYB                                         ------>ZmHOX2a(1)         <---------MYB59   ---------->DOF2                       ============================HOX2a_HOX2a ----->ANAC58                <---------ANAC58                    -------->P ----->ANAC58                <---------ANAC58                   --------->WOX13(1) -->ZAT18                    <---------ANAC46                 <------ZmHOX2a(2) -->ZAT14                   <---------At4g35610              <---------ARR11(3)                   --- ---ZAT18---------->DOF2  <--------P   ----------->RAV1(2)   --------->ARR11(3)                   ---   ctcactaaagggaaagaaaactaaattggtagcttatacactcctgctcgaatttgagagagagatcaaccaaattacaatcccaaaatccaatatttgt  2925400                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                       <---------HSFC1(1)                                                                ---------->DOF2 ------->MYC3                                                             --------->TOE1(2)  <-------MYC3           ---------->DOF2  ------->GAMYB                    --------->TOE2(3)  ------->MYC2         <---------MYB52(1)--------->MYB46(3)                --------->TOE2(2)  <-------MYC2       ----------->GT1     <---------MYB52(2)       <---------ATHB12   --------->HSFB2a(2) ------>ANAC58     <---------ALFIN1               --------->WOX13(1)   <---------HSFB2a(2) ------>ANAC58    --------->LBD16        <---------ALFIN1  ------->TEIL--------->HSFC1(1)   aagcaaaacccgttaaatcccccaattcaacgaacacacacacacacatgatcaatcactgaacctaagagctctagaaacacatgctatatcgatcgat  2925500                    --------->ZAT18                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58                  --------------->AtSPL3                                                           <-                  <---------------AtSPL8              --------->ARR14(2)                       ------                  --------------->AtSPL8            --------->LBD16                           <------                  <-------TEIL                 <---------GLK1(1)                              <------              <---------ICU4                   --------->GLK1(1)       --------->TOE1(2)      <------   atatgtatagaactaataagtgcgtacaaattcgaagacagaagaagagaactccgaaatcgctaaaatcgaacgtagaattgaagaagagtgtttaaga  2925600                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                       <--------ATHB1                                                                       --------->ATHB51                                                                      <---------ATHB51                                                          --------->AHL20(2)<---------ANAC58        <---------HSFB2a(2)                          <-------TEIL     <---------YAB1    --------->GLK1(1)                            --------------->AtSPL8-------->HAHB4    <---------ARR14(2)                           --------------->AtSPL3<---------ICU4 --------LBD16                                   <---------------AtSPL8--------->ATHB12 --->ATHB12               --------->AHL20(2)<---------AHL20(2)        <---------AHL20(2) ---TOE1(3)             ----------->GT1     --------->AHL20(2)        --------->ICU4 ---YAB1--------->HSFB2a(2)               <---------AHL20(2)          --------->AHL20(2)   ---------- ---TOE2(3)    <-------TEIL               --------->AHL20(2)<---------AHL20(2)       <---------At5g28300   ttggggaattcgagaggctcatcaacaagtatataagtgtgtatatatatataggtacatatatatatgaaaataattgctcgtacttacagtgaaagaa  2925700                                                                                 --------->ARR14(2)                                                                                 <---------ARR11(3)                          <---------AtMYB61                                     <------ZmHOX2a(1)                    <---------TOE2(3)                                         <---------TOE1(3)                    <---------TOE1(3)                                  --------->YAB1           --------->TOE1(3)                                          <---------ATHB12           --------->TOE2(3)          <------------CBF               ------>MYB83<---------ARR14(2) >DOF2  <---------ALFIN1  *TSS--------->ETT(2)                       ------>MYB46(1) <----------DOF2   ggaaaaccccaaacctgaaattagggttttggtcgagagaaattgcagaggttatagatgggagagagacctatcatgttcaggatacttttcttatact  2925800                                        <---------At4g35610                                    --------->ARR14(2)                                    <---------ARR14(2)                               <-----------GT1                             --------->KAN4(2)                            <---------KAN4(1)                            <----------TaMYB80                            <---------GLK1(1)             <-----------GT1                           --------->ARR14(2)            <-----------GT1            <------------------------ANAC81 <---------TOE2(3)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------TOE1(3)                              <---------ARR14(2)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------TOE2(2)   ------>ZmHOX2a(1)          --------->ARR14(2)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------TOE1(2)------>ZmHOX2a(1)         <---------LBD16   <----------DOF2         <---------ARR14(2)<------------------------ANAC81       --------->ZAT14  <------------------------ANAC81  <----------DOF2   <----------DOF2            ----------->GT1   tctgtcttttttttttttttttttttttggatattccctttccgcttaggttttccttttttcctcctctgtaactaagaagaagtaaactcggattcag  2925900                                                                                                    -                                                                                                    -                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                 ------>ZmHOX2a(2)---                                                                 <---------YAB1 <------ZmHOX2a(2)<---                                                          <---------ANAC46     --------->ARR14(2)<---                <-------TEIL                            <---------ANAC46       <---------ARR14(2)----         --------->CCA1(2)                             <---------AtMYB61       --------->TCP20   <---         <---------GLK1(1)           <----------DOF2  --------->ZAT14       --------->ALFIN1     ----        --------->ARR14(2)      <----------DOF2       <---------ZAT14    --------->DAG2          <---        <---------ARR14(2)<-----------GT1<---------YAB1--------->ALFIN1 ---------->DOF2     <--------   acagaacatggatatgggttcacttgtttttcttcttttctttatttttgtttcagtgtggtgttttttgattcaaaagtggatccccattgtacagtta  2926000     ----------->GT1 <---------ARR14(2)                                                                                 < --------->ARR14(2)                                                                                 - ----->MYB46(1)                                                                                     - ----->MYB83                                                                                      <-- -------------AGL15                                                                               --- -------MYB59                                                                                  ------ ------------->AG                                                <---------YAB1                <----- ------------->AGL3                                          <---------AHL20(1)                <----- ------------>AGL15                                          --------->AHL20(1)                ------ --------------AGL3                                          --------->ARR11(3)                <----- --------------AGL2                                        <---------AHL20(2)                  ------ ------------->AGL2                                        --------->AHL20(1)             <---------AHL20(2) --------------AGL1        <---------TOE1(3)               <---------AHL20(1)             --------->AHL20(2) ------------->AGL1        <---------TOE2(3)            --------->AHL20(2)          <---------AHL20(2) --------------AG   ---------->DOF2                    <---------AHL20(2)           --------->AHL20(2) -ZAT6  --------->CCA1(2) --------->MYB52(1)          --------->AHL20(2)     ---------->DOF2  -------   ccaaatatggatataaacaaacaaaagttaagggaaatatgtatacaaatttcaaatttaaaatattttgatatgttgtcaaagaattatatataaatat  2926100            <---------AHL20(2)            --------->AHL20(1)           --------->AHL20(2) <---------YAB1 <---------TOE2(3) ---------AHL20(2) -------->AHL20(2) -------->YAB1 -------AHL20(2)              --------------->AGL15 ------>AHL20(2)             ----------------->AGL1                           --------->At5g28300 --->ARR11(3)                <-----------------AGL1                          ----------->GT1 ----ARR11(3)                ----------------->AG                --------->DAG2 ----AHL20(2)               -------->P                           <---------TOE1(3) --->AHL20(1)     <---------TOE2(3)                              <---------TOE2(3) ----AHL20(1)    ---------->DOF2                           ------>ZmHOX2a(1)--------->ZAT6 --->AHL20(2)  <---------YAB1----------------->AGL3  --------->DAG2        <---------At5g28300      < -->AHL20(2)--------->AHL20(2)<---------------AGL15 ---------->DOF2       <-----------GT1          --   attaatattgcaattttattaaagtaaacttaccaattgatgaaacacaaaaaaaaaagtccttgataaggttgttttacagtaatttgattctaaacct  2926200  Previous    Next  AGI:  At1g09060.1    Description:  transcription factor jumonji (jmjC) domain-containing protein. similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G00990.1); similar to jmjC domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95907.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17550.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain WRC (InterPro:IPR014977); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR Range:  from: 2921067    to: 2925726    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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