Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ARR11(1)                   --------->SPL7                   ------->TEIL                                        --------->ANAC58                 <---------SPL7                                        ------>MYB46(1)                --------->RAP2.6(2)                                    --------->ANAC58               --------------->AtSPL3                                  ------>MYB83               --------------->AtSPL8                            <---------SPL7       --------->YAB1                                           --------->DEAR3(1)       <---------ICU4          <---------ANAC46              <---------ALFIN1          <---------ZAT2      <---------ATHB12<----------DOF2                     --------->PCF2              ------>NtERF2      --------->ICU4 <---------DAG2                    <---------TOE1(2)      ----------->RAV1(2)<--- -ANAC58      --------->At4g35610                --------->WOX13(1)--------->SPL7    <---------ALFIN1 -ANAC58      <---------At4g35610         <---------ZAT2 <-----------HVH21  <------ZmHOX2a(2) ------>ZmHOX2a(2)   cttgagcaataatctcagccgtaccttttagcaccgtgttcccaagctcatcaatcgcatgtcccaccgtaccaagcgatccctgagccacctcgatctc  824000                                       <------MYB46(1)                                       <------MYB83                                      --------->MYB111(1)                                      <---------AtMYB61                                      --------->MYB59         <-----------RAV1(1)                                     <---------MYB55(1)      ------>ZmHOX2a(2)                                     <--------P             <------ZmHOX2a(2)                                    <---------MYB52(1)     <---------AGP1                                    <-------GAMYB          <---------ARR14(2)                                   <---------DEAR3(2)      --------->ARR14(2)                                   <---------MYB46(3)      --------->ARR11(3)                             ------>ZmHOX2a(2)            <---------CCA1(2)                            <------ZmHOX2a(2)        <---------GLK1(2)                           <---------ARR14(2)        <---------ARR14(2)                      --------                           --------->ARR14(3)     <---------ANAC55(2)                        --------                           <---------ARR11(3)     --------->ANAC55(2)                        <-------                           <---------ARR14(3)     --------->ANAC58                       --------->DEAR3(1)                           --------->ARR14(2)     --------->ANAC58                     --------->MYB52(1)                        <---------HSFB2a(2)      <---------LBD16                      --------->AtMYB61                        --------->HSFB2a(2)    <---------ATHB12    <------NtERF2<---------At4g35610 <       ----------->RAV1(2) --------->ARR11(3)--------->WOX13(1)   <---------MYB46(3) --------->MYB46(3) -------DOF2     <---------GLK1(2)<---------DEAR3(1) --------->ARR14(2)         --------->At4g35610 -   tttcttcaaacctgtgccaaattcttcgagatctcgtcggtaggtttcaatcacggattcggatctggtggctagagttttcatcagaccaccgaagctc  824100         <------NtERF2                                                                            <--    --------->DEAR3(1)                                                                            ---  <---------At5g28300                                                                            <--- <---------ALFIN1            <---------HSFB2a(2)                                        --------->ARR14(2) ->At4g35610           <---------WOX13(1)                                               <---------GLK1(2) ->ZAT2<---------DEAR3(1)   <---------LBD16                                       <---------GLK1(2) --At4g35610<---------MYB52(1)                     <-------TEIL                   --------->ARR14(2) ---------MYB55(2)  <---------YAB1          <---------HSFB2a(2)                   <---------ARR14(2) -------->MYB46(3)<-------TEIL             <---------LBD16             <---------ANAC46 <---------ARR14(2)   catccaccgtcgtcgttagattcagattgctctggatgttcttgctctggatgttcatgctcttcgctgtgtttcggtgaatcggattcggattcggttt  824200                <---------ANAC55(1)                <---------ANAC58                <---------ANAC58                <---------ANAC55(2)                        ------>ZmHOX2a(2)          --------->ARR11(3)                              <------ZmHOX2a(2)          <---------ARR11(3)                             <---------AGP1      ------>ZmHOX2a(2)                                  <---------ARR11(3)     <------ZmHOX2a(2)                                   --------->AGP1    <---------ARR14(2)                                   <-----------ARR10    <-----------ARR10                                    <---------ARR14(2)                        --    --------->GLK1(2)                                    --------->ARR14(2)                      ----    --------->ARR11(3)                                   --------->ARR11(3)                     -----    <---------AGP1                                      <---------CCA1(2)                      <-----    <---------ARR11(3)                           --------->DAG2    <---------ATHB12            <-----    --------->ARR14(2)     <---------ARR14(2)   ---------->DOF2   ------>MYB83                 <-----   <------ZmHOX2a(1)       --------->ARR14(2)<---------ANAC46     --------->MYB52(1)           <----- -------HSFB2a(2)  --------->REM1(2)         <---------ANAC58     ------>MYB46(1)              <----- ------>HSFB2a(2)--------->LBD16             <---------ANAC58<-----------GT1                  ------>ZmHOX2a(2) ------LBD16    <---------ANAC46       <-------TEIL    ----------->ARR10--------->ZAT14       =======   ctggaggatctaggtcttccgtgaagacggatttgaagaaattcatagcgtaaagctcagatcttaccaatcggtactctcagataatttgtttgatccg  824300                                                                                     <---------O2                                                                                     <---------TGA1a                                                                                     --------->TGA1a                                                                              <---------ZAT2                                                                              <---------At4g35610    --------->GLK1(2)               <-----------TGA1                          --------->ZAT2 *TSS -------->DOF2                      <-----------HVH21                         --------->ZAT14-------- ------->HVH21                     <---------ANAC58                           --------->At4g35610 <-- ---->LBD16                        <---------ANAC58      ======================================bZIP_DOF ----ANAC55(2)          --------->ARR14(2)               ---------->DOF2      <---------ZAT14<------- ----ANAC58             <---------ARR14(2)          <------ZmHOX2a(2)      <---------At4g35610    --- ----ANAC58            <------ZmHOX2a(1)           <---------ARR11(3)      --------->At4g35610<------ ----ANAC46            ====================================HOX2a_HOX2a  <-----------HVH21    <------- ----ANAC55(1)       <---------TOE1(3)             --------->ARR11(3)<---------ANAC58<---------ANAC46 =============================HOX2a_HOX2a      <------ZmHOX2a(1)     <---------ANAC58--------->O2<---   tgaaagaatcaatttgaagagtgaaggattcgaattagcgtcagaaataggaagatcacaaaagacttgaagcttgtcgctgcagagacgtctaattttt  824400                                               --------->YAB1                                            <---------ICU4                                            --------->YAB1                                         --------->WOX13(1)         <---------AHL20(2)            ------------>CBF        <---------AHL20(2)             <------NtERF2     --------->AHL20(2)              <---------ANAC46     <---------AHL20(2)              <---------ANAC58 ->AHL20(2)                 <----------DOF2<---------ATHB12 ---------GT1               <---------DAG2 --------->ICU4 --AHL20(1)                 <---------------AGL15 ------->ID1           --------->YAB1<---------ANAC58                                      <---------GLK1(1) ---AHL20(2)   ----------->GT1      ---------->ID1                     <---------YAB1     <---------ARR14(2) --AHL20(2)<---------TOE2(3)--------------->AGL15                      ----------->TBP    --------->ARR14(2) --------GT1 --------->YAB1<-----------------AGL3           <-----------RAV1(2) <-----------RAV1(2)   ttcccatttttttaatgaagataaataatactttatttggcgtcaattatcagattaatgggccagaagttttataaatgggccagaagttggatatgtt  824500                                                 <---------TOE2(3)                                                 <---------TOE1(3)                                             <-----------TGA1                                             --------->TOE2(3)             --------->ANAC46           --------->MYB46(3)           --------->ZAT6               <---------MYB52(2)    --------->MYB46(3)               *TSS --------->MYB52(1)       ---------->ARF1  ----------->RAV1(1)                --------->ZAT18    <-----------GT1                     <--------   agtccaacaaataacacaaaaccctagaattcattcaagggaactaacgtcaaggtttttgctcttcttctctcccaagtcccaaactcgttttgcatcg  824600                                                                             --------->WRKY38(1)                                                                             --------->WRKY12                                                                            <---------MYB52(1)    <--                                                                        <---------At5g28300       <--                <---------At4g35610                                     <---------DOF5.7(2)      ----                --------->At4g35610                           --------->ANAC58                   <---           <---------ANAC58                                   --------->ANAC58        --------->ANAC58           <---------ANAC58                                 ---------->DOF2<-------GAMYB       <-----      <-----------RAV1(1)                         <---------AtMYB61 <---------ZAT6<-----------RAV1(2) -AtLEC2   <---------ANAC46  ---------->DOF2   ----------->HVH21 ------------>AtMYB77 --------->ANAC58   ccattgttgtgttgctggagctaaatagagagaaagagagagagtgtctgtgatggtgatgagaaagctacagttaccgttgagccagacgcagaaggtt  824700                                          --------->At4g35610                                          <---------At4g35610                                          <------NtERF2                                         <---------DEAR3(2)                                         ------>NtERF2                                        <---------DEAR3(1)                                       <------NtERF2                                       --------->ATERF1(1)               ------>MYB46(1)    ---------                                      <---------SPL7                     ------>MYB83 <---------WRKY12                                      <-----------HVH21                --------->MYB46(3)   ---------                                      <---------ATERF1(1)              --------->DREB2C(2)--------->YAB1                                     <---------DEAR3(1)                --------->DEAR3(1) <---------ICU4 ----MYB46(1)                     <---------ETT(2)                <-----------HVH21  --------->WRKY18(1) ----MYB83                 <---------ATHB12                      --------->YAB1     <-----------HVH21 ----->MYB59             --------->WOX13(1)    --------->ZAT6<---------MYB52(1)     --------->LBD16 ------AtMYB61   <---------At4g35610<------NtERF2 ----------->TGA1<-----------TGA1 --------->ANAC46-- ----MYB52(1)<---------ATHB12  <-----------RAV1(1)----------->HVH21   --------->DEAR3(2) <---------ATHB12   aggtttgagagagcaatcgagcggcttcaatcactgtcgtcgtcggctaactctgacgcttctgttatcgtcaccgactctattcccgtcaaccatgacg  824800                                                                       <------MYB83           --------->AHL20(2)                                          <------MYB46(1)         --------->ANAC55(2)                                       --------->ATHB12          --------      ------>ZmHOX2a(1)                                           <---------YAB1             --------     --------->TOE2(3)                                          <-----------GT1    ---------->DOF2--- -->HVH21--------->ANAC58         --------->HSFB2a(2)     <---------ANAC58        XXXXXXXXXXXXXXXXXXX -->TGA1 --------->ANAC58         <---------HSFB2a(2)     <---------ANAC46      --------------->AGL15 ---->NtERF2       <---------At4g35610<---------WOX13(1)  <---------ANAC58      --------->TOE2(3) <--   atgccttcctcaagtaatttcatctcattctcccttctggattgaaatttttgtcaaattgcgttttcacgattggttttttcattaaaggggacatgga  824900  Previous    Next  AGI:  At1g03350.1    Description:  BSD domain-containing protein. similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G13110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22467.1); contains InterPro domain BSD (InterPro:IPR005607) Range:  from: 822638    to: 824393    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g03360.1    Description:  ATRRP4; exonuclease. similar to unnamed protein product [Vitis vinifera] (GB:CAO22464.1); contains InterPro domain S1, RNA binding; (InterPro:IPR003029); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 824537    to: 826358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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