AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
     --------->ANAC55(1)
     --------->ANAC55(2)
     <---------ANAC55(2)
     --------->ANAC46
     --------->ANAC58            <-----------RAV1(1)
     --------->ANAC58<---------At4g35610      --------->WOX13(1)   ---------->CDC5                <-
-------At5g28300   <-----------RAV1(2)    ----------->GT1         <-------TEIL--------->CCA1(2)   --
--------GT1        ==========================RAV                <---------ARR14(2)           ------>ZmHOX2a(1)
>GT1<---------TOE2(3)--------->At4g35610  <---------MYB46(3)    --------->ARR14(2)      <---------ZAT18
 
tactgtttacgtaatacatagggcagatgaaaaattgtgttggagttgttaatcagacaaaaacgaagattcagcgcgaagatagagacagtgctcctat  119000
                <---------ICU4                                                      <---------ICU4<-
               --------->ICU4                                                       ------>MYB46(1)
           <---------ZAT14                                                          ------>MYB83  <-
           --------->ZAT18                                                        <---------MYB59 --
          --------->ANAC58                             --------->ATHB12           <---------MYB46(2)
          --------->ANAC58              <---------AHL20(2)                       --------->ANAC55(2)
        <---------AtLEC2          <---------ANAC58   <---------DAG2              <---------ANAC55(2)
      ------>ZmHOX2a(1)           <---------ANAC58   <----------DOF2      <----------DOF2         <-
--------ANAC55(2)              <-----------GT1  --------->ANAC58          <---------DAG2          <-
------->ANAC55(2)           <---------AHL20(2)  --------->ANAC58--------->YAB1 <-----------GT1    <-
 
tacatactcctgcatgcactgattacttcatttttttccttgtttattttcaagcactttattggtttaataatctactttatcacctaattacattgaa  119100
           <---------At4g35610
           --------->At4g35610
--------ANAC58
--------ANAC55(2)
------->ANAC55(2)                                                  --------->ANAC58
--------ANAC58                                           <-----------GT1
--------ANAC46               <<<<<<<<<MYB98     <---------YAB1     --------->ANAC58
--------ANAC55(1)         <---------TOE2(2)  <---------MYB52(1)    --------->ANAC46     <---------AtLEC2
 
tacgtgttaacttgagcttagagtcttcatatgttacttagttcattcgttatgagtttaaaaccctctcactcaacctgtactatgttttgcatagttg  119200
                    <---------ARR14(2)                           --------->MYB52(1)
                <---------At4g35610                            <---------MYB52(2)
            --------->TOE2(3)                                 --------->ANAC46
          <---------ARR11(3)                                  --------->ANAC58
          --------->ARR11(3)                                  --------->ANAC58
         <---------GLK1(1)                                    --------->ANAC55(1)
         --------->GLK1(1)                              --------->CCA1(2)                         <-
         --------->CCA1(1)                              --------->GLK1(1)                         --
         <---------RVE1(1)                             <---------ARR14(2)                   --------
         <---------CCA1(1)                             --------->ARR14(2)                 <---------TOE2(3)
         --------->RVE1(1)                           --------->LBD16                    <---------AHL20(2)
        --------->ARR11(3)                          <---------ANAC58                   <---------AHL20(2)
        <---------ARR11(3)   <---------ZAT14        <---------ANAC58                   --------->AHL20(2)
   --------->TOE1(2)--------->ARR14(2)              <---------ANAC46         <---------ALFIN1 ------
  --------->YAB1--------->At4g35610                <---------LBD16 ----------->GT1     --------->AHL20(1)
 
gctaaacatgagatatcttagcagaaactgagaacacttgtcaagttcaacatttgcggatatacaagtaacgaaaaacaacacttgaaatttaatgaaa  119300
                                                                             ------------>CBF
                                       --------->ANAC46                    ------->GAMYB
                                <---------ARR11(3)                   ----------->TBP
                                --------->ARR11(3)                 ----------->TBP--------->AHL20(2)
                             <-----------GT1<---------ALFIN1       --------->AHL20(2)           *TSS
--------ARR11(3)     <---------TOE2(3) --------->ANAC55(2)       <----------DOF2  <---------AHL20(1)
------->ARR11(3)    --------->YAB1     <---------ANAC55(2)       <---------DAG2   <---------AHL20(2)
->YAB1 ----------->GT1   ------->TEIL <---------TOE1(3)      <---------MYB52(1)   --------->AHL20(1)
---->DOF2        --------->TOE2(3)    <---------TOE2(3) <-----------GT1 <-----------GT1----------->GT1
 
agatgttagaaagtataaaacattaatgaatataacatcttaacgtaacacacctatattttccattactttatataaccctcaataaaatagtttataa  119400
                                         <---------ANAC58                               <------NtERF2
                                         <---------ANAC58                              --------->LBD16
                                         <---------ANAC46                             --------->DEAR3(1)
           --------->TOE2(3)            <-----------------------TaNAC69(2)           <---------LBD16
     --------->ANAC46                ---------->DOF2                               --------->DEAR3(1)
   --------->ANAC58            --------->ANAC58              ------>ZmHOX2a(1)    --------->DEAR3(2)
   --------->ANAC46            --------->ANAC58   ------>NtERF2 ------>ZmHOX2a(1) --------->MYB46(3)
   --------->ANAC58           --------->GLK1(1)  <---------ETT(1)              ----------->HVH21
<---------REM1(2)            ---------->DOF2     --------->DEAR3(1)      ------>ZmHOX2a(1)         -
 
atctacacacaaaacctcatcaaaaaccatgggaaagccaagaagcgtgtctccgaccatcttcctcctagtcatcctcttggtgaccgccggagagaag  119500
                                                                       <------MYB83
                                                                     <--------P
                                                                     <---------MYB52(1)
                                                                     --------->ALFIN1
                                                              --------->CCA1(2)
                                                              <---------GLK1(1)
                               --------->GLK1(2)              ---------->DOF2--------->YAB1
      --------->ANAC58       <---------HSFB2a(1)      <------ZmHOX2a(1)<------MYB46(1)
      --------->ANAC58       --------->HSFB2a(1)   <------NtERF2    <-------GAMYB
  <------NtERF2              --------->HSFC1(2)   --------->LBD16  <---------MYB46(3)
<---------DEAR3(1)         <------NtERF2        <---------LBD16   <---------RAP2.6(2)  --------->ALFIN1
-------->ATERF1(1)  ---------->DOF2   --------->HSFB2a(2) --------->YAB1    --------->ICU4
 
acggaggcgaagccatggtggaagaaagtcggagattccatcgggaatatagccggaggaataagaaatgcggttgggaattataaaccagtggagatgg  119600
                              --------->HSFC1(2)
                              <---------HSFC1(2)
                     <---------ANAC58
                     <---------ANAC58
                     <---------ANAC46                                                            <--
               <---------ARR14(2)                                                          ---------
               --------->ARR11(3)                                  <---------ANAC46        <--------
               --------->ARR14(2)                         <---------ANAC46                <---------ARR11(3)
              <------ZmHOX2a(1)                         <---------ZAT14              ------>ZmHOX2a(2)
       ---------->DOF2     ---------->DOF2        ------->TEIL   ----------->GT1     ===============
  ----------->GT1  <---------ANAC46    <----------DOF2  --------->ZAT14           -------->HAHB4----
 
gattgtcgttaaaaggaggattttgtgtgagaaagcttctgtctttgaatacgaatgtgttcagtgaatggtgtatagctcttaatgatccaagagctcc  119700
                             <---------ANAC58
                             <---------ANAC58
                             <---------ANAC46
       <---------YAB1     --------->ALFIN1
 ------->TEIL     --------->KAN4(2)
 <-------TEIL    --------->KAN4(1)
-------TOE1(2)   <----------TaMYB80
>GLK1(1)         <---------KAN4(1)                                    <---------ATHB12          ----
-GLK1(1)        <---------KAN4(2)                                  <---------AHL20(2)       <-------
===HOX2a_HOX2a  ---------->TaMYB80                ---------->DOF2 --------->AHL20(2)        <-------
-->ZmHOX2a(1)<---------TOE2(3)     --------->WOX13(1)          --------->ATHB12             <-------
 
tatgtacatgaagattgagaatataccaagtggtgtgtcaatcgagtccattttaaagaagcctattgatttaatcaagaaccattatcccaatttcttg  119800
                                                                                            <-------
                                                                                      <-------TEIL
                                                                                     --------->ARR14(1)
                                                    <-----------GT1                 --------->ARR11(1)
         --------->DOF5.7(2)                   <---------AHL20(2)                   <---------GLK1(2)
------>DOF2    ----------->GT1                 --------->AHL20(2)                   --------->ARR14(2)
--ANAC58--------->TOE1(3)             <---------ANAC58              <----------DOF2 <---------ARR14(2)
--ANAC58<----------DOF2               <---------ANAC58 <----------DOF2            ----------->ARR10
--ANAC46--------->TOE2(3)   ---------->DOF2  <----------DOF2   <<<<<<<<<TBF1   --------->AtLEC2   <-
 
aaagtttggaactttaaccagaaaattaagagaaagcctagacgtgctctttaattttctttattcttcttctttttgagacatgcagattcgctattat  119900
<- Previous    Next ->

AGI:  At1g01305.1   
Description:  unknown protein
Range:  from: 119397    to: 119997    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version