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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ZAT14
--------->
ZAT14
--------->
ALFIN1
<---------
ANAC58
<---------
WOX13(1)
<---------
ANAC46
--------->
ATHB12
--------->
YAB1
<---------
ANAC58
<---------
WOX13(1)
<---------
YAB1
--------->
ATHB12
--------->
ZAT18
===============
HOX2a_HOX2a
--------->
YAB1
<----------
DOF2
==========================
HOX2a_HOX2a
---------
YAB1
---------->
DOF2
<---------
CCA1(2)
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
--------
DOF2
---------->
DOF2
---------->
DOF2
<---------
AHL20(2)
--------->
ATHB12
<--
---
CCA1(2)
---------->
DOF2
<---------
YAB1
<-----------------
AGL3
--------->
ICU4
------>
ZmHOX2a(1)
ctttgataatagcaaaagcccaaaggcccaaatatgaaaagctcgcttatcttttattggcgtgaggactgaactgattgatggatcatctcctctgtct
91400
------->
TEIL
<---------
MYB52(1)
------>
ZmHOX2a(1)
<----------
DOF2
--------->
TOE2(3)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
GLK1(2)
--------->
ARR14(2)
--------->
AGP1
<---------
ARR14(2)
------>
NtERF2
--------->
GLK1(1)
--------->
At4g35610
<------------
CBF
<---------
ARR11(3)
<---------
At4g35610
<----------
DOF2
<---------
YAB1
<---------
GLK1(1)
<-----
--------
DOF2
<---------
YAB1
<-----------
GT1
<---------
At4g35610
<---------
At4g35610
ctttgcctctgccaattttgaaagtttcttcttttgcaatcttcttagagtttgttttaccattgcaaatttagcagatcctttatgtactctgcttctt
91500
<---------
AGP1
--------->
ARR11(3)
--------->
ANAC58
<-------
TEIL
--------->
ANAC58
<---------
TOE2(3)
<---------
AHL20(2)
<---------
REM1(1)
<---------
TOE1(3)
--------->
At4g35610
--------->
AHL20(2)
--------->
ALFIN1
<---------
YAB1
<---------
At4g35610
<-----------------
AGL3
<---------
TOE2(3)
------>
ZmHOX2a(2)
<---
-----
DOF2
--------->
GLK1(2)
<---------
ANAC46
<----------
DOF2
<------------
CBF
--------->
GLK1(2)
tctgtctgctcaagagtttctgtattcgatataattttggaatgttgtgcaaagttttaatctttgaggtgaagcaaattgatctggtttaagattcagt
91600
<-----
<------
--------
------>
MYB83
------>
MYB46(1)
--------->
ATHB12
--------->
MYB52(1)
<---------
ICU4
<---------
MYB111(2)
<---------
AHL20(2)
<---------
MYB46(2)
--------->
AHL20(2)
--------->
AtMYB61
<---------
AHL20(2)
<---------
MYB52(2)
--------->
AHL20(2)
<---------
MYB59
--------->
ICU4
<---------
MYB111(1)
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
ANAC46
------>
NtERF2
<------------
CBF
--------->
At4g35610
<---------
At4g35610
--------->
DEAR3(1)
<----------
DOF2
--------->
ANAC55(2)
---------
CBF
------->
TEIL
<------------
CBF
<---------
At4g35610
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
attgagacgacgacgtatttattaattgcattggtatttgactttgatctgaacaaaacttacttcttcttctccctcttcctctgttcacctaaccttt
91700
--------->
ZAT2
---------
<---------
ZAT2
--------->
LBD16
--------->
AHL20(2)
--------->
At4g35610
--------->
ANAC46
<---------
ARR11(3)
<------
ZmHOX2a(1)
<---------
MYB52(1)
--------->
ARR14(2)
--------->
At4g35610
<------
NtERF2
<---------
GLK1(2)
<---------
At4g35610
--------->
DEAR3(1)
----
MYB52(1)
<---------
ARR11(3)
<---------
At4g35610
<---------
LBD16
----
DOF2
<---------
AHL20(2)
--------->
ARR11(3)
---------->
DOF2
------>
NtERF2
---------
->
TOE2(3)
<---------
AHL20(2)
<----------
DOF2
--------->
At4g35610
--------->
MYB46(3)
----
aggctccagattttaatttctcacatttcttcgtctttgtagcaagaag
atgtctaagcagaggaagaaagctgacttagccaccgttttgcgcaagtca
91800
--------->
ANAC58
--------->
ANAC58
<---------
ZAT18
--------->
SPL7
--------------->
AGL15
<---------------
AGL15
<---------
O2
<-----------------
AGL1
<-----------------
AGL1
<-----------------
AGL2
<---------
ALFIN1
<---------
At4g35610
----------------->
AGL3
<---------
ALFIN1
------>
NtERF2
<---------
At4g35610
--------->
At4g35610
>
ANAC58
=============================================
bZIP_DOF
--------->
At4g35610
--------->
GLK1(1)
>
ANAC58
---------->
DOF2
--------->
DEAR3(1)
<---------
TGA1a
<---------
ZAT18
------>
ZmHOX2a(1)
----------->
AtSPL8
--------->
ALFIN1
<---------
ARR14(2)
--------->
At4g35610
--------->
MYB52(1)
tggtaccacttaaggctctcggtgcgccatcccactcgggtcccgacttgggatgcgattgtgctcacagcggctagtcctgaacaagcggagctctacg
91900
------>
NtERF2
--------->
LBD16
<--
<---------
DEAR3(1)
<-----
<---------
LBD16
<---------
At4g35610
<--------
--------->
ARR14(2)
<---------
HSFB2a(2)
<---------
<---------
ARR14(2)
<-----------
RAV1(2)
<---------
MYB46(3)
--------->
ZAT2
===========================
HOX2a_HOX2a
<---------
At4g35610
============================
HOX2a_HOX2a
--------->
At4g35610
<-----------
HVH21
------>
ZmHOX2a(1)
<---------
ARR14(2)
<---------
ZAT2
<---------
ALFIN1
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ATERF1(1)
<---------
ZAT2
--------->
ARR14(2)
<------
ZmHOX2a(2)
<------
NtERF2
--------->
At4g35610
<---------
MYB52(1)
--------->
ARR14(2)
<<<<<<<<<
AtERF-4
<---------
STY1(2)
<---------
MYB46(3)
--------->
MYB52(1)
-----
<<<<<<<<<
AtERF-3
--------->
STY1(2)
<----------
DOF2
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<---------
ATERF1(1)
<----------
ID1
>>>>>>>>>>>>>>>>>
LFY
----------->
RAV1(2)
<---------
ARR14(2)
actggcagctccggcgagcgaaacgtatgggacgaatagctagctccactgtcactttggccgttcctgatccagatggcaaacggatcgggtctggtgc
92000
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<---------
YAB1
--------->
LBD16
-------
At4g35610
<---------
ICU4
--------->
LBD16
----
At4g35610
<---------
YAB1
--------->
PCF5
-
At4g35610
--------->
ANAC58
------>
ZmHOX2a(2)
----------->
HVH21
<
--
RAV1(1)
------->
GAMYB
--------->
ANAC58
<---------
ARR11(3)
<---------
ICU4
-
------------------>
TaNAC69(2)
--------->
ICU4
--------->
ARR11(3)
--------->
ICU4
----
tgctactctcaacgccatttatgctctcgctcgtcattatgagaaattgggttttgatcttggtcccgag
gtaaacattgtgttgacaggttagactatt
92100
<------
MYB46(1)
--------->
MYB111(1)
--------->
MYB52(2)
--------->
MYB111(2)
<---------
MYB46(3)
--------->
MYB46(2)
--------->
MYB55(2)
<---------
MYB52(1)
<--------
HAHB4
--------->
ATHB12
<---------
ICU4
<---------
ZAT14
--------->
ARR11(3)
<------
MYB83
<---------
MYB59
<---------
ANAC46
--------->
YAB1
--
--------->
bZIP60(1)
<---------
ARR11(3)
<-------
GAMYB
<---------
ARR14(2)
<-----------
GT1
<---------
ANAC58
-------->
ATHB1
----------->
GT1
--------->
TOE1(2)
---------
ICU4
<---------
ANAC58
<---------
ATHB12
<----------
DOF2
--------->
GLK1(2)
-------->
ATHB51
------->
TEIL
<---------
At4g35610
<---------
TOE2(3)
<---------
WOX13(1)
------->
TEIL
----->
YAB1
<---------
CCA1(2)
<---------
GLK1(1)
<---------
MYB55(1)
<-----------
GT1
--------->
ARR14(2)
cataatttgacctcactgtatctcttgcttgagttgatatctgaatcattacggtagttggttttgttgattaactttgttaatttgatgaatctgggat
92200
----------->
GT1
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
--------->
MYB46(3)
<---------
ANAC58
--------->
ALFIN1
--------->
MYB52(1)
<---------
ANAC58
<---------
AtMYB61
--------->
YAB1
<---------
ANAC46
--------->
REM1(1)
--------->
ZAT14
<---------
ICU4
<---------
ANAC58
<-----------
GT1
<---------
ZAT14
--------->
ICU4
<---------
ANAC58
--------->
AHL20(2)
--------->
ALFIN1
--------->
YAB1
<---------
ANAC46
------->
ZAT18
--------->
AHL20(2)
<---------
TOE2(3)
----------->
RAV1(1)
<---------
MYB46(3)
gtgcaataaactacatctgtttatatagcagtgtggtgtgatttgatgttgtatgttaataatcaacag
atggaagttgcgaatggtgcttgcaaatggg
92300
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AGI:
At1g01220.1
Description:
GHMP kinase-related. similar to hypothetical protein OsI_009504 [Oryza sativa (indica cultivar-group)] (GB:EAY88271.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66976.1); similar to hypothetical protein OsJ_008832 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25349.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain L-fucokinase (InterPro:IPR012887); contains InterPro domain GHMP kinase; (InterPro:IPR006204)
Range:
from: 91750
to: 95651
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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