Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC46                                                                   --------------->AGL15                                                                  ----------------->AGL3                                                             --------->ANAC58                                                             --------->ANAC58      --------->YAB1                                                 --------->At4g35610               <--------HAHB4                                                 <---------At4g35610--------->LBD16<---------ICU4             ---------->DOF2                    --------->MYB52(2)<---------LBD16  --------->ATHB51      <--------P                              <--------P   <---------ALFIN1     --------->YAB1 ----------->RAV1(2)                --------->TOE2(3)     <---------ZAT2============================= ----->GAMYB--------->AtMYB61       --------->TOE1(3)     --------->ZAT2---------->DOF2 ------->DEAR3(1)                 <---------TOE1(2)    --------->MYB46(3) <---------TOE2(3) ------>DEAR3(2)             ------->TEIL    <-----------HVH21  <---------ARR14(2)--------->AHL20(2) ------>MYB46(3)    --------------------->WRI1<---------MYB52(1)--------->ARR14(2)--------->ICU4   accgcctggttagaccaaagctcagagaacgtatcgaacgttagaccggttagctgaaccagcacggttccggttaaaggaagaataattaagaagaaga  58800                                                  <----------DOF2                                                --------->At4g35610                                                <---------At4g35610                                          ------->TEIL--------->MYB46(3)                                          --------->ARR14(2)         <---------TGA1a                  <---------ARR14(2)       <---------ARR14(2)         <---------bZIP60(2)           --------->ANAC55(2)         --------->ARR14(2)         --------->TGA1a               --------->ANAC58          <---------AHL20(2)              ----         --------->O2                  --------->ANAC55(1)       <---------ICU4                 -----         <---------O2                  --------->ANAC58  ------->TEIL                          ------     <-----------HVH21                 <---------ANAC55(2)----------->GT1                     -------    <---------MYB46(3)  --------->ZAT14--------->ANAC46------->GAMYB <---------LBD16          <------ ==================bZIP_DOF        <-----------HVH21--------->MYB52(1) --------->LBD16    <---------YAB1   gaatggtggtcacgttgcaagagttgtgaagtccaagcttcacgtatttgagcttaacggacgttaataaatccggcaaacgtcttcgaattcttataac  58900                                <---------MYB52(1)                               --------->At5g28300      <---------YAB1        ------>NtERF2    --------->YAB1          --------->LBD16   <---------ATHB12        --------->ANAC46   --------->ICU4          --------->DEAR3(1) <---------At4g35610      <---------LBD16 --->GAMYB        --------->ANAC58 ---->MYB46(3)    --------->ANAC58                                             <---------ZAT14 --->RAP2.6(3)    --------->ANAC46                                        <xxxxxxxxxxxxxxxsmallRNA(si3) -->MYB52(1)<---------HSFB2a(2)<-------GAMYB                 <---------MYB52(1)--------->ZAT14 -----GT1------->TEIL   --------->ARR14(2)    <------ZmHOX2a(2)<---------MYB46(3)          ----------   ggccgatgatgaatctcgaaacgccatctccgccgttaatctctctcgatccatctcaatgctgtttgttctctccatcagtatagttttgggtcgaaat  59000              --------->ANAC58              --------->ANAC58              <---------TOE2(3)                                                                ------         --------->WOX13(1)                <----------DOF2                                    <------     --------->ANAC58                   --------->ARR11(3)                                    <------     ----------->GT1<------ZmHOX2a(1)   <---------ARR11(3)        ---------->DOF2          --------->GLK1(1)     --------->ANAC58             ----------->GT1   <---------ARR14(2)           --------->YAB1<----- ->GT1--------->TOE2(3)       --------->AHL20(2)    --------->ARR14(2)  ----------->GT1    <---------GLK1(1)   atttcaaacgtaaatcaaggaaggattgaagataaaatgtaaaatctttaggcaaatttggagaaatagaaagagagagaaaatgagaatgggaattcta  59100                                                                               --------->AHL20(1)                                                                               <---------AHL20(1)                                                                               --------->AHL20(2)                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                   *TSS      <---------AHL20(1)               <------ZmHOX2a(1)                                   ---------->DOF2            -------            <------ZmHOX2a(1)                                    --------->ANAC58             -------  ----------->GT1                                                --------->ANAC58 <---------AHL20(2) --------->AGL15     ----------->GT1                          --------->ZAT18--------->AHL20(1)  ---- -----------AGL2--------->ARR11(3)                  --------->CCA1(2)     --------->AHL20(2) <------- -----------AGL3--------->ARR14(2)                 <---------ARR11(3) ----------->GT1      --------->YAB1 ----------AGL15<---------ARR14(2)                 --------->ARR11(3)----------->GT1  --------->ICU4<   aaattggtgaattaggaggattttggtgaaatgagggcaagtagggatggagagatatatagagtgcaagaaagataaaaatattttaaagattaataat  59200                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                        <---------MYB46(3)                                                        <------MYB46(1)                                                        --------->MYB55(2)                                                        <------MYB83                                                       --------->ALFIN1                                                       <---------DEAR3(1)                                                       <---------AtMYB61                                                     <---------ANAC58                                                     <---------ANAC58                                                    --------->MYB55(2)                                                 <---------ICU4                                                 --------->ATHB12                                                 --------->YAB1                                                 -------->HAHB4                                                <---------YAB1                                                --------->ICU4  --------->ICU4                                <---------ATHB12 ->HAHB4                                     <---------AHL20(2) -->YAB1                         --------->AHL20(2) <---------MYB46(3) <---------YAB1 ----->YAB1                      --------->YAB1<---------TOE2(3)     --------->ZAT6 --YAB1                     ----------->GT1 --------->AHL20(2)   <---------ARR11(3)            <----- ---------ICU4        ---------->DOF2       <---------AHL20(2)--------->LBD16--------->At4g35610   agtaatgacttaacaaaaaaaaaaaaaagatggaataatattcgaatttaatgatgggtggttccgagataatactattagctcaactacttatatggga  59300                      <---------GLK1(2)                                              ------->TEIL                     <---------At4g35610               --------->ANAC58             <---------GLK1(2)       --------->AHL20(1)                              --------->ANAC58         <---------ZAT2       <---------AHL20(1)                     --------->ANAC55(1)               --------->At4g35610       <---------AHL20(2)                     --------->ANAC58                  --------->ZAT2       --------->AHL20(2)                     --------->ANAC58                  <---------At4g35610      --------->AHL20(2)  <---------YAB1 <---------ZAT18                       ------>MYB46(1) ----PCF2  --------->AHL20(2)<-----------GT1  --------->ANAC46---------->DOF2  ------>MYB83   ccttgatattaaattaagtagtcagattatttttcatgttttgttcacacgaaatgcaagttacaaaagtctaacaaaacctagctgaatctcataagtc  59400                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 <---------AHL20(1)           --------->AHL20(2)                                                 ------>MYB83        --------->YAB1<-----------GT1                                         ------>MYB46(1)       <------ZmHOX2a(2)                                                    <---------MYB59      <---------ARR11(3)                                                    --------->TOE2(3)      --------->ARR11(3) <----------DOF2                                 <-----------GT1   <--------P    <------MYB46(1)                    --------->YAB1    <---------REM1(1) ----------->GT1 <------MYB83            <---------AHL20(2)         <---------ANAC46   atatggtagatcataaatttggtttatcttttttttcacacatatatttgggcatcataacattctattttggtgtaacctaattttttttttttttgaa  59500                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                             <---------YAB1                                                                          ------>ZmHOX2a(1)                                     ----------->RAV1(1)                 --------->TOE2(3)                            <-----------GT1                        <---------AHL20(2)                          --------->YAB1                          <---------AHL20(1)                          <---------ICU4  ----------->RAV1(1)     --------->AHL20(1)      <---------TOE2(3)          ----------->RAV1(1)  --------->ZAT6      ----------->HVH21  <-----------GT1--------->TOE2(3)  <---------YAB1   ----------->GT1  --------->REM1(1)       <---------MYB46(3)--------->YAB1   gtttttgataaacaacataacttgttaattataccactacaacacaacaaaatatgacatgtttgttatatatttccttataattaaacttaaacgtttt  59600                                                                                                    -                                                                     <---------AHL20(2)            --                                                                     --------->AHL20(2)            <-                                                          --------->ANAC58                         <-                                                          --------->ANAC58                       <---                                                          ----------->GT1       --------->AHL20(2) <-                                 <------MYB83   <---------ANAC58 --------->AHL20(2)    --------->YAB1              <---------YAB1     <------MYB46(1)<---------ANAC58 <---------AHL20(2)   <---------YAB1<   <-------TEIL             ------->TEIL        <---------ANAC46--------->AHL20(2)   --------->AHL20(2)   agacatccatgatgtttttattagcaagtgtatgtaggttatccaaaattgagtgagggcaagttataaaattatatatcaattgaatattataagcagg  59700  Previous    Next  AGI:  At1g01120.1    Description:  KCS1 (3-KETOACYL-COA SYNTHASE 1); acyltransferase. Identical to 3-ketoacyl-CoA synthase 1 (KCS1) [Arabidopsis Thaliana] (GB:Q9MAM3;GB:Q56YX9;GB:Q9ZTK3); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT2G26640.1); similar to fatty acid elongase 3-ketoacyl-CoA synthase [Brassica napus] (GB:AAT65207.1); similar to 3-ketoacyl-CoA synthase 10 [Gossypium hirsutum] (GB:ABX10440.1); similar to fatty acid elongase 3-ketoacyl-CoA synthase [Brassica napus] (GB:AAT65206.1); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392); contains InterPro domain Thiolase-like; (InterPro:IPR016039); co Range:  from: 57269    to: 59167    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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