Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ARR14(2)          --------->ARR11(3)          <---------ARR11(3)       --------->YAB1 ---->TEIL<---------ARR11(1) ----->P  --------->ARR14(2) ->ZmHOX2a(2) --->CCA1(2) -ZmHOX2a(2) -->ARR14(2) ---ARR11(3)                                                              <----------ID1 -----ARR10                          <----------DOF2                 <---------ICU4 -->ARR11(3)                       ------>ZmHOX2a(1)                <---------ATHB12 -->AGP1 <---------CCA1(2)     ------>ZmHOX2a(1)              <---------ANAC55(2) ---ARR14(2)                <---------ATHB12                --------->AHL20(2)             ----------   tacctagtatcatatcttcatacaactccaatccttcctctttggttatcaactatttcaaattacttaaatcaatacaacaaatctcacaacttgtaaa  48900                                      <------MYB46(1)                                      ----------->GT1                                <-----------RAV1(2)                              --------->SPL7                                                        -                            --------->ZAT18             <---------ANAC58                            <                            <---------SPL7 --------->ATHB51                                       <--             <-----------------------TaNAC69(2)      <---------WOX13(1)                        <-----   ---------->DOF2<------ZmHOX2a(1)   <------MYB83  <---------ANAC58                          <------ <---------------AGL15     <---------ANAC58--------->ATHB12                ========================== <---------HSFB2a(2)      --------------->AtSPL3    <---------ANAC58       --------->LBD16    ------- --------------->AGL15 <------ZmHOX2a(1)  <---------YAB1<---------ANAC58   ------>ZmHOX2a(1) -------- ->GT1    <------ZmHOX2a(1)<---------ANAC58-------->ATHB1       ----------->HVH21    ----------->HVH21   attccaaaagaaggagacgaggagaggaagcgtaccaggctggtattattggtggattgcttctccttgacaacttcctggacagagacgacgggagatc  49000                                                        ---------->DOF2                                                       ==================================HOX2a_HOX2a                                                       <------ZmHOX2a(1)          <---------LBD16                                                       =================================HOX2a_HOX2a                                                    <---------LBD16               ------>ZmHOX2a(2)       <-------GAMYB                                --------->LBD16              <------ZmHOX2a(2)      <---------ANAC46                             <---------TOE2(1)            --------->ARR14(2)      <---------ANAC58                             <---------TOE1(1)            <---------ARR14(2)      <---------ANAC58                            =======================HOX2a_HOX2a     <------NtERF2                                ------>ZmHOX2a(2)  --------->ATERF1(1)   <---------DEAR3(1)                             ==========================HOX2a_HOX2a   --------->ALFIN1                              =============HOX2a_HOX2a  --------->MYB52(1) --------->ALFIN1                                ===========================HOX2a_HOX2a          <--- -------->MYB55(2)                               ========================HOX2a_HOX2a             ---- ---------MYB46(3)                               <------ZmHOX2a(2)   <------ZmHOX2a(1)           <--- -------LBD16                                   <---------ARR14(2)   ===================HOX2a_HOX2a -ZmHOX2a(2)                                    --------->ARR14(2)   ====================HOX2a_HOX2a ---ARR14(2)                                  <---------MYB46(3)   --------->ALFIN1            ------ =HOX2a_HOX2a                                 ----------->ARR10   <------ZmHOX2a(1)          -------- -->ARR14(2)     <---------WOX13(1)          --------->ALFIN1     ======================HOX2a_HOX2a ->GLK1(1)     --------->ATHB12        --------->MYB52(1)         =======================HOX2a_HOX2a   gacgggtggcgttggagtgattgagtctgcgaagggagagggaacgggtggatccgaggaaagaagaaggaggagccaatcggatcgggagcaagagacg  49100                                                                    <---------YAB1          =================HOX2a_HOX2a                            --------------->AGL15          ------>ZmHOX2a(2)                                       <---------------AGL15         <------ZmHOX2a(2)                                 <------NtERF2                         <---         ==================HOX2a_HOX2a                   --------->DEAR3(1)                      ----        --------->ARR14(2)                               <---------ETT(2)                        ----        <---------ARR14(2)         <---------ZAT2       <------NtERF2                            <--- <---------YAB1                    <---------At4g35610  --------->ATERF1(1)                   ------- ------ARR14(2)      --------->ARR14(2)                <---------ATERF1(1)           --------->YAB1 ----->ARR14(2)      <---------ARR14(2)       --------->At4g35610<-----------------AGL3    <--------- ------GLK1(2)      <------ZmHOX2a(1)       <---------PCF2------>NtERF2             <---------ATHB12 ----->ARR10 --------->AtLEC2      --------->At4g35610--------->DEAR3(1)    <---------GLK1(1)-------- ->CCA1(2)<-------TEIL           <---------ZAT18 ---------->DOF2 <-----------------AGL2    --------->MYB52(1)   attctcatgggatccatgcagaggaaccgtggcagtgagcttagtgggagcgaaagccgtcgccattgctatcaatggaaaccccaatgagattaacgga  49200                                                                                               ------                                                                                               ------                                                                                              -------                                                                                             <-------                                                                                           <------ZmHOX2a(2)                                                      <------NtERF2                   *TSS<---------ARR14(2) ----------->GT1                                    <---------DEAR3(1)                <---------At4g35610 ------GLK1(1)                    ---------->DOF2  <---------------------WRI1       <-----------RAV1(2) ----->ARR14(2)                  --------->AHL20(2)<---------LBD16              ==================HOX2a_HOX2a ----->GLK1(1)           --------->LBD16 --------->At4g35610                    <------ZmHOX2a(1) ------ARR14(2)         --------->HSFB2a(2)     --------->ALFIN1             --------->At4g35610 >GAMYB                 <---------HSFB2a(2)   --------->CCA1(2)              <---------At4g35610 --GT1                 <---------LBD16   <---------At4g35610                 <------NtERF2--------->ARR14(2) ->ANAC46           <----------DOF2      <---------ZAT14          --------->CCA1(2)<------NtERF2   attcggaaaaaaaaaaaaaaaactttctgggaaaataaaagagagcagagatgggcggagagaacaagagatgagaggcagaggaggcagacgatcccgg  49300                                                            ------>MYB46(1)                                                           <---------ALFIN1                    <---------AHL20(2)     --------->AHL20(2)                   <---------YAB1          <---------AHL20(2)<---------ALFIN1       <----------------                  <---------AHL20(2)      --------->AHL20(2)------>MYB83         <---------ATHB12                <---------AHL20(2)     --------->AHL20(2) <---------MYB55(2) ------------>CBF              <---------AHL20(2)      <---------AHL20(1)  --------->MYB46(3)>>>>>>>>>>>>>>>>>LFY --->LBD16   <---------AHL20(1)       --------->AHL20(1)<---------TCP20  <---------DOF5.7(2) >NtERF2     --------->AHL20(1)       <---------ARR11(3)<---------TCP15(1) --------->ZAT6      <----- -->LBD16   <---------AHL20(2)        --------->ARR11(3)--------->PCF2 --------->DOF5.7(2) <--------- --LBD16  <-----------TBP   <---------MYB46(3)<---------ATHB12        --------->TOE2(3) <-----------GT1   ctctaaatacttatatatatttttatttgtttgttcgaaaaatatttaatcaattttggacccacccttcttcgttaacaccaatgtttttttctttctt  49400                                    --------->AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                           <------ZmHOX2a(2)                          --------->AGP1                          <---------ARR14(2)                          --------->ARR14(2)                                       --------------->AGL15                      --------->ARR14(1)                                           <---------------AGL15                      --------->CCA1(2)                            --------->AHL20(2)                      <------ZmHOX2a(2)                            <---------AHL20(2)                     --------->AGP1--------->YAB1                 <---------AHL20(1)                     --------->ARR14(2)                           --------->AHL20(1)                     <---------ARR14(2)                           --------->AHL20(2) --------ANAC81      --------->ARR11(3)                           <---------AHL20(2)            <---- -----DOF2           <---------ARR11(3)          <---------ANAC55(2)   <-----------GT1    ----------- -DOF2<---------CCA1(2)------>ZmHOX2a(2)<---------YAB1      --------->YAB1   <----------DOF2  -------   ttcatttcatctcttaatttcaagatccgatctacaaatataatccttgttaagtatgctcaacataatttattttcttctttaactcgaattggttaat  49500                                                        <---------AHL20(2)                                                       --------->AHL20(2)                                          <---------At4g35610                                          ----------->GT1                                          --------->At4g35610                             ------>ZmHOX2a(2)      --------->YAB1         --------->YAB1     --------->At4g35610     --------->TOE2(3) -----ATHB12               <---------ARR11(3)       --------->TOE1(3)             <----------DOF2 >GT1   --------->ICU4     --------->ARR11(3)    <-----------GT1                 <---------ANAC58 -->WOX13(1)      <-----------GT1       <-----------RAV1(2)    <-----------GT1   <---------ANAC58  <-   caatagtggaatcatcaaattaacaaaatgatctgaacaaattcaggtgaataaccataaaattctaaccatttagaaatatggcttttcaattgagttt  49600           <---------MYB52(1)        <-------TEIL<---------TOE1(3)        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->AGP1<---------TOE2(3)      --------->ARR14(2)                     <----------DOF2                              ---------->DOF2      <---------ARR14(2) ----------->GT1  --------->ARR11(3)                   <----------DOF2  -----    ----------->ARR10 --------->ARR11(3)  <---------ARR11(3)               <---------MYB111(1)------- --------TOE2(3)<----------DOF2<---------AHL20(2)         <--------P   <-------TEIL  --------->ZAT6   taagaatagatccgttttctttaagatttgtatataatcccataaatcttttgttatcaggtagagctatagatgcaactacttttgactctaaaagaaa  49700                                             <---------YAB1                            <---------MYB52(1)                        ------>MYB46(1)    --------->YAB1                        ------>MYB83      <---------YAB1                        -------->P      -------->ATHB1                       ------>ZmHOX2a(1)<---------ICU4                 ------>MYB46(1)       --------->AHL20(2)                 ------>MYB83          <---------AHL20(2)     ------>ZmHOX2a(1)        --------->AHL20(2) <-------GAMYB--------->YAB1   <-----------GT1                          --- ------>GT1    <---------MYB59         --------->ICU4   <---------AHL20(2)             ------>ZmHOX2a(1) --->DOF2      --------->TOE2(3)       <---------ATHB51--------->AHL20(2)        <<<<<<<<<MYB2    ---   gaaaattgaatttaaaacctaattcctaccgttactactaaattattatgaaacatatttaatcctctaaacaacattttttggttttcctatttctctt  49800  Previous    Next  AGI:  At1g01090.1    Description:  PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring). similar to AT-E1 ALPHA (pyruvate dehydrogenase complex E1 alpha subunit), pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] (TAIR:AT1G59900.1); similar to unknown [Populus trichocarpa] (GB:ABK95003.1); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) Range:  from: 47485    to: 49286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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