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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                                       --------->AHL20(1)
                                       <---------AHL20(1)
                                       --------->AHL20(2)
                                   <---------AHL20(2)
                                   <---------YAB1
                                  <---------AHL20(1)
                       <---------RAP2.6(3)                                          --------->ANAC58
                       ----------->RAV1(1)                                       ----------->TGA1
                       ------>NtERF2--------->YAB1 <------MYB46(1)               ----------->HVH21
        <---------AHL20(2)        --------->AHL20(2)                            <---------MYB52(2)
        --------->AHL20(1)        --------->AHL20(1)                  --------->LBD16
        <---------AHL20(1)        <---------AHL20(2)         <------ZmHOX2a(1) --------->At4g35610
        --------->AHL20(2)     --------->AHL20(2)  <------MYB83      --------->LBD16--------->ANAC58
       --------->AHL20(2)    --------->AHL20(2)   --------->MYB59 -------->P   <---------At4g35610 <
     --------->YAB1   --------->RAP2.6(2)         <---------TOE2(3)<-----------------AGL1--------->ICU4
  --------->YAB1      <---------ETT(1) <---------AHL20(2)   --------->ZAT18  --------->ZAT18 ------>ZmHOX2a(2)
 
aactataagaataaattgcaaatggccgacaaaataatataataaaatgcaattaggtttgagaggactaacccgagaaggccactgacgaaatgatcga  40500
                                                                                                   <
                                                                                                   <
                                                                                                   <
                                                                                              <-----
                                                                                              <-----
                                                                          --------->AHL20(2) <------
                                                                      <---------YAB1     <---------TOE2(3)
             --------->MYB52(2)                                   --------->TOE2(3)--------->AHL20(1)
           <---------MYB52(1)                 --------->YAB1    <-------TEIL       <---------AHL20(1)
          --------->TOE2(3)          <-----------GT1  <----------DOF2<---------AHL20(2)  <---------YAB1
---------MYB52(1)               ------>ZmHOX2a(1)  --------->GLK1(2) --------->AHL20(2) <-----------GT1
 
ccattagcctaaacgttatttgtggtcttgttttcctatttaacaacaatagaaattctttagaaaattcattaaaattatacatatatattaacattcg  40600
---------ANAC58                                 ===============HOX2a_HOX2a             ---------->DOF2
---------ANAC46                                 ------>ZmHOX2a(1)                   --------->ANAC58
---------ANAC58                 <---------GLK1(2)                            --------->ANAC58
----ANAC58       <---------AtLEC2     <-----------GT1                        --------->ANAC46
----ANAC58       <---------ANAC58     --------->ZAT6                  <---------DAG2--------->ANAC58
-TEIL            <---------ANAC58   <-----------GT1     <------ZmHOX2a(2)    --------->ANAC58
 
tggcttctaaatttctacttgcatgttagaatacagaattttcactatctcctatttcgatcaacatatcaaacctttccaagacataggcaaagggaac  40700
                                                                                         ------->TEIL
                                                                                        ------>MYB83
                                                                                        ------>MYB46(1)
                                                                                      <---------MYB46(2)
                                                                                      <---------MYB52(2)
                                                              <---------ARR11(3)      --------->DEAR3(1)
                                                              --------->ARR11(3)      --------->MYB46(3)
                                                      ------>MYB83            <-------TEIL
                                   --------->YAB1     ------>MYB46(1)         <---------ZAT18
      <---------LBD16             <---------ATHB12   ----------->RAV1(1)      --------->ZAT14
   ---------->DOF2        --------->ANAC58          --------->AtMYB61         --------->ZAT18
  --------->AHL20(2)      --------->ANAC58       --------->ANAC46<----------DOF2     --------->ANAC46
 
caaaattaaagcggaaatagccattcgataagcaccaatgaccatatggttcacaccaacatcaagagctttcttcacaagtgcattcaccgaacccatc  40800
                                                                         <---------ARR14(2)
                                                                         <---------ARR11(3)
                                                                         --------->ARR14(2)
                                                                         --------->ARR11(3)
                                                                         <---------ARR11(1)
                                                                   --------->ANAC46
                                                                   --------->ANAC58
                                                                   --------->ANAC58
                                                             --------->ARR11(3)
                                 --------->ARR11(3)          <-----------ARR10
             --------->AtMYB61   <---------ARR11(3)          --------->ARR14(2)
       <---------bZIP60(1)       <---------AHL20(1)          <---------ARR14(2)
       --------->bZIP60(1)       --------->AHL20(1)          <---------ARR11(3)
     <-----------GT1       --------->At5g28300              <---------GLK1(1)
    ----------->HVH21     ----------->GT1   --------->ZAT14 <---------CCA1(2)
--------->REM1(1)    ----------->HVH21  <-----------GT1 --------->AtLEC2<---------CCA1(2)      <----
 
gctacatttgacatcaccatcactatgaccggtgaatatttttctactactctcactccttgcatatctccagccatatctctctctatatgtgagttat  40900
                                                                --------------->AGL15
                                                          --------->HSFC1(2)
                                                          --------->HSFB2a(1)
                                                          <---------HSFC1(2)  --------->DAG2
                           >>>>>>>>>>>>>>>>>LFY        ---------->DOF2       ---------->DOF2
 <---------ANAC58       --------->ANAC58            ------->GAMYB   <-----------TBP
 <---------ANAC46       --------->ANAC58           --------->MYB46(3) --------->YAB1             <--
 <---------ANAC58     --------->CCA1(2)    *TSS   -------->P   ----------------->AGL3 ------->TEIL
-----YAB1           --------->CCA1(2)<----------DOF2--------->TOE2(3) <---------AHL20(2) <----------
 
ttttgtgtgtattacttagagagagataagccccaatgtgctttgagtttggcaaccacaaagcttcccatatttataagaaaagtgtgtatgtgttgtt  41000
                                  --------->TOE2(3)
                             --------->DOF5.7(2)
                            --------->TOE1(3)
                            --------->TOE2(3)
                          <---------TOE2(3)
                          <---------TOE1(3)
                         <---------DOF5.7(2)       ------>ZmHOX2a(1)
                       --------->DOF5.7(2)       ----------->RAV1(2)               ------->MYC2
                      --------->TOE1(3)          <---------LBD16                   <-------MYC2
                      --------->TOE2(3)    <-----------GT1                         <-------MYC3
                    <---------TOE2(3)     <---------YAB1                           ------->MYC3
<----------DOF2     <---------TOE1(3)    <---------AHL20(2)         <-----------ARR10            <--
-------ALFIN1     ----------->HVH21    <---------AHL20(2)           --------->ARR11(3)        <-----
-RAV1(1)        <----------DOF2<---------DOF5.7(2) --------->LBD16  <---------ARR11(3) ------->TEIL-
 
ccactttggacttacttagctttgacgttaacgttaacctatatttttattctcctgaactacttatctaaaatcttactacagcatatgcatttgtttt  41100
            --------->ANAC58
         <---------ATHB12            <---------AHL20(2)
       --------->WOX13(1)            --------->AHL20(2) <---------GLK1(2)
   ----------->GT1               <---------AHL20(2)     --------->ARR14(2)
  --------->DAG2                 --------->AHL20(2)     --------->ARR11(3)
 ---------->DOF2          --------->REM1(1)             <---------ARR14(2)
-------TOE2(3)            <---------ALFIN1             <------ZmHOX2a(1)     --------->YAB1     ----
----AHL20(2)--------->ANAC58   <----------DOF2--------->ZAT18     --------->TOE2(3)            <----
-------->YAB1            --------->ZAT14   <---------ANAC46       ----------->GT1      <-----------GT1
 
aatgaaaagttaatcaagcacttcatactacaccctttaattttttatgtgtacaataggattttcaaacgtttaaaatagcataacatattactatatt  41200
                                                                                              <-----
                                                                                         --------->DOF5.7(2)
                                                                                         <---------MYB52(1)
                                <------ZmHOX2a(1)                                       --------->TOE2(3)
                         --------->GLK1(2)              ------>NtERF2               <---------ARR14(2)
                        <---------ARR11(3)             --------->ANAC58             --------->ARR14(2)
                        <---------GLK1(2)     <-------TEIL--------->DEAR3(1)    <---------TOE2(3)
   --------->GLK1(1)<---------AtLEC2 --------->AHL20(2)--------->ANAC46        --------->MYB52(1)
----->YAB1--------->ARR14(2)  <---------TOE1(3)        --------->ANAC58 --------->AHL20(2)    <-----
---TEIL   <---------ARR14(2)  <---------TOE2(3)      <---------ALFIN1   <---------AHL20(2) <--------
 
catcatatatccaaatactctttgcaagattctaaggaaattacataggtacattaccacgccgaagcatttgattttaatctaacgaattcgttaactt  41300
                                                                             <---------AHL20(1)
                                                                             --------->AHL20(1)
                                                                            <---------AHL20(2)
                                                                          --------->AHL20(2)
                                                                          <---------AHL20(2)
                                                                        <---------AHL20(2)
                                                                        --------->AHL20(2)
                                                                      --------->AHL20(2)
                                                                      <---------AHL20(2)
                                                                    <---------AHL20(2)
                       <---------DOF5.7(2)                        <---------AHL20(2)
                     --------->DOF5.7(2)                        <---------AHL20(2)
                     <---------MYB52(1)                       <---------AHL20(2)
                    --------->TOE2(3)                       --------->AHL20(2)
                --------->ARR14(2)                   ----------->GT1--------->AHL20(2)
                <---------ARR14(2)              --------->MYB46(3)--------->AHL20(2)          <-----
-----DOF2    <---------ANAC55(2)                <---------ALFIN1--------->AHL20(2)      <----------DOF2
----DAG2     --------->ANAC55(2)              --------->ANAC46--------->AHL20(2)  <-----------GT1
-DOF5.7(2) <-----------GT1             <---------TOE2(3)    <---------AHL20(2)<---------AHL20(2)
 
ttttttttggtgaattacgaattcgttaacttggcatagattaatgttcccacaacctgttatatatatatatatatatatatattttcttctttttttg  41400
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AGI:  At1g01070.1   
Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G11460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62855.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620)
Range:  from: 38752    to: 40944    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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