Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                          --------->ALFIN1                                                        ----------->HVH21                                               ===========================HOX2a_HOX2a                                              <------ZmHOX2a(2)                                              ============================HOX2a_HOX2a                                             --------->AGP1                      <---------ALFIN1                                         =================================HOX2a_HOX2a                                        ==================================HOX2a_HOX2a                   --------------->AtSPL3------>ZmHOX2a(2)                    <---------ALFIN1                   <-------TEIL  <---------AGP1------>ZmHOX2a(2)            ------>NtERF2     <----------DOF2   ------->TEIL     <------ZmHOX2a(2)          ------>ZmHOX2a(1)<----------DOF2   aaatcttctttatacacttgatacgtaccgagctagagctggatccagatccggagcggtgaagcattcctcccaagccaccaccactttccttgtggag  26536100                        ------>ZmHOX2a(1)                                                        ----                       <---------ALFIN1                                                          ----                  ----------->ARR10                                                   ------->TEIL --              ------>NtERF2                          --------->PCF5               --------------->AtSPL3             <---------PCF2         ---------->DOF2 <-----------HVH21       <------NtERF2       -----          --------->ALFIN1 ------>NtERF2  <-----------HVH21                ------>NtERF2       <-----   ttgctcttggccgtggtgcctagctcctccgccagttccaaagccttcagtcccggtcccggttccgtatccttggccaccggttccgtacccttggcca  26536200       ------->TEIL   ------>ZmHOX2a(2)                                       ----------->RAV1(1) ------->RAV1(2)                                  ------>ZmHOX2a(1) ----->O2                              ================================RAV      ------>ZmHOX2a(1) --------->HVH21  ----------->RAV1(2)  ----------->RAV1(2)<---------ALFIN1   ------>ZmHOX2a(1) ->NtERF2        ------>NtERF2        ------>NtERF2 <---------ALFIN1        <---------ALFIN1 -------- ----ALFIN1     <---------ALFIN1     <---------ALFIN1  <---------ALFIN1   ------>ZmHOX2a(1)  --------   cctgatccgtacccttggccacctgttccgtatccttggccacctgtagctcctccaccaccaccagttccgtatcctcctcctcccatcggatttccgt  26536300                                  <-----------TGA1     <-----------------AGL1        <-----------RAV1(1)       <-----------HVH21  ----------->HVH21 <-----------HVH21        --------------->AtSPL3    ------>ZmHOX2a(1) ------->AtSPL8           --------------->AtSPL8  ----------->RAV1(2)  ------>NtERF2 ------->AtSPL3    ------>ZmHOX2a(2)        ----------->HVH21    <--------P                         <   actcgtcatactgctgctggatcgggtttccgtactcgtcagtggcctgacctcctggacggttctggtaagacgccatgttcttcttgtcttaagcaaa  26536400                                                                       <-------TEIL                                                                    *TSS             ----------->GT1   <----------DOF2                     ----------->ARR10         <------- ----------DOF2            <----------DOF2    <----------DOF2------>ZmHOX2a(2)   <------------CBF   cactttgagctaagctagttaaaaaaactctttctttgtgatattagactttgatgagtttgatcgatgaagattcgttaacgcattgaagatagtttta  26536500                                                            --------->ALFIN1                                                           <-----------HVH21                                                          <---------O2                                                          --------->O2                                                          --------->TGA1a                                                          --------->ALFIN1                                                          <---------TGA1a                                                        <---------O2                                                     ----------->TGA1                                                     ----------->HVH21                                                 ---------->DOF2                                                 ===================bZIP_DOF        --------->ALFIN1                                        <---------------AGL15      ----------->RAV1(1)                                       <-----------------AGL3    <------NtERF2      <------NtERF2                                      ------------>CBF  <---------TGA1a          <------NtERF2 ----TBP          <------ZmHOX2a(2)  ------->TEIL=================bZIP_DOF  <-----------RAV1(1)   tagtccggtttcggatatggatcaactattagtttaatgaatcaatatttggaaagtgacgcgtggcagcagcagaaaatgtcggcgtggtgtttcgcca  26536600                   ------->TEIL   ---------->DOF2               <----------DOF2    <-------TEIL   tacgtgttcgtatttaaaatgaacttctgatatcactaaaggaatcggattgaatttatttttgagctttcatgtcgataccaagtacgtgttcatatca  26536700                                                 <------NtERF2                                          <-----------RAV1(1)                                  ------                   ----------->GT1      <----------DOF2                                  ------>ZmHOX2a(1)                 ---------->DOF2   <----------DOF2                                      <---------ALFIN1           --------->ALFIN1        ------>ZmHOX2a(1)                             ---------->DOF2   ----------->HVH21       <-----------ARR10   --------------->AtSPL3     <------ZmHOX2a(1) ------>ZmHOX2a(1)   atcccatgacagggtgctggaaagcaaaatatctatccttttctttgtggcggtactaacattatcgtagctaacaggacacgtaatgctcctcctcgaa  26536800                                                                                                  ---                                                                                                -----                                         <-------GAMYB                                          <----                                 <-------TEIL                                                 <------   <-------TEIL                  ------->TEIL    ----------->GT1                              ------- ---->DOF2                   --------------->AtSPL3                                           =======   agcgatgcgtcgtgttaatgattttcatacacacgtacatcgtcgttgattgggtgaatttgaagaaacttggctgggtctgaaacatttgggctcatgt  26536900      ---------->DOF2   ----------->GT1 <---------PCF2 ------>ALFIN1                                                                           <-------GAMYB ---->ALFIN1                                                                  <------NtERF2 -------RAV1(1)                                                               ------>NtERF2 ---TGA1a                                                          <-----------GT1      ------>ZmHOX2a(2) -->TGA1a                                               <-----------GT1   ------->GAMYB ============= ================bZIP_DOF                       >>>>>>>>>MYB98  <----------DOF2 <----------DOF2 *TSS   gtgggccgtaaatcacttactaattagcccatggactaaaactaagccctaacaaaatttactcaacttttaccaaacgccgcgtttagatcgttggtgt  26537000  Previous    Next  AGI:  At5g66400.1    Description:  RAB18 (RESPONSIVE TO ABA 18). Identical to Dehydrin Rab18 (RAB18) [Arabidopsis Thaliana] (GB:P30185); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 26535523    to: 26536468    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66410.1    Description:  PLP3B (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG). similar to PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) [Arabidopsis thaliana] (TAIR:AT3G50960.1); similar to unknown [Populus trichocarpa] (GB:ABK94844.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 26536996    to: 26538922    Orientation: Forward Links:  TAIR  MIPS