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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
1 10 20 30 40 50 60 70 80 90 100
------->
GAMYB
----------------->
AG
----------->
GT1
----------
------>
DOF2
<-----------
GT1
----------->
RAV1(1)
<-------
TEIL
aaagccctctcaaacc
ctacagaagatttaaaccaaatgagtcaaccacataacatagagaagataatatggaagatgccagaagagagtttcatctggg
26532500
<------
NtERF2
<-------
GAMYB
------>
NtERF2
<-------
GAMYB
->
RAV1(2)
------->
TEIL
----------->
HVH21
<-----------
RAV1(1)
aaac
ctcgagacgggcaatggtgaagacagcgtgagcagtgttcttgtacgtcggcagacttgaccctcttccgtcgttga
ctgttgttcaatcaagtta
26532600
----------->
GT1
----------->
GT1
<------
ZmHOX2a(1)
----------->
RAV1(1)
<
---------->
DOF2
<-----------
RAV1(2)
<---------------
AtSPL3
--
<----------
DOF2
----------->
GT1
<---------------
AtSPL8
---
gcaactttttaaaagcaaaatcgatgagttaatccaggagtgaaaaaccagac
cttggaatctcgtacgaacaacatcaagagagtgcatagcagctacg
26532700
<------
NtERF2
==============================
MYC_MYB
<-------
GAMYB
--------->
ALFIN1
<------
NtERF2
<---------
ABI4(1)
------>
NtERF2
<------
NtERF2
------>
NtERF2
------>
NtERF2
<------
NtERF2
--------->
ABI4(2)
<---------
ALFIN1
<------
NtERF2
<---------
O2
<---------
ABI4(2)
--------->
TGA1a
----------->
HVH21
<---------
ALFIN1
<------
NtERF2
------
NtERF2
--------->
O2
<----------
TaMYB80
------>
NtERF2
<-------
TEIL
---->
NtERF2
<---------
O2
------>
NtERF2
----------->
HVH21
------>
ZmHOX2a(1)
------>
ALFIN1
------>
NtERF2
<------
NtERF2
--------->
O2
------->
TEIL
gtggcgaatccagcgacggcgccggcggtggcattttcccactgccacgacgccgccat
caacgaatccttagatgcaatccggactaatcgcgattgtt
26532800
=================
HOX2a_HOX2a
==================
HOX2a_HOX2a
------>
ZmHOX2a(1)
------>
NtERF2
<-----------
HVH21
------>
NtERF2
----------->
HVH21
---------->
DOF2
----------->
ARR10
------>
ZmHOX2a(2)
---------->
DOF2
----------->
GT1
<------
ZmHOX2a(1)
<-------
TEIL
<------
ZmHOX2a(2)
tacagagctaatctgaagttaaagactcatttgacgcgtataaaaaacgaaaggacagtagatggaagattcgccgtcctccggtacgatctccgactcc
26532900
<------
NtERF2
------>
NtERF2
------
------>
NtERF2
*
TSS
--------->
ABI4(2)
------>
NtERF2
<-----------
HVH21
<---------
ALFIN1
----------->
GT1
----------->
GT1
gagttctgccgtccgttcaag
atatgcttccaacacggcgccgttttactcggaagctaaaacccaaatcagaagaggtttcgatagttatttgaggccc
26533000
<----------
DOF2
<---------
ALFIN1
----------->
RAV1(1)
----
----------->
GT1
<---------
ALFIN1
<----
------>
CBF
---------->
DOF2
<---------
aatacgtttagttaattctaaaaacccaaagcccaacacttttagttcattctgaacaatatatgaggcttactatttaaaacgtttaggttaatgttgg
26533100
----------->
AtSPL8
---
GAMYB
----------->
GT1
--
RAV1(1)
---------->
DOF2
ttgtaccattgcaagttcaacgctggaaataaagcaaatag
tatatagataatctttttccgaaacaaaatcagatttgagtaataaacatatgatacac
26533200
---------->
DOF2
<---------------
AtSPL8
---------->
DOF2
--------------->
AtSPL8
--------->
AtLEC2
---------->
DOF2
---------->
DOF2
<
actcatgcaaacaaagccaaaagaaattgaaaactcaatgagaaacgaaagcattatattgtacataaattataaagatggatttgta
ttaataagcatg
26533300
----------->
ARR10
======================
RAV
------>
NtERF2
----------->
RAV1(1)
<-----------
HVH21
----------->
HVH21
------>
ZmHOX2a(2)
------->
GAMYB
------->
GAMYB
----------->
RAV1(2)
<------
NtERF2
<-----------
GT1
-----------
GT1
<-------
TEIL
------>
NtERF2
<-----------
GT1
---------->
DOF2
gttaaccctccgacagatacgcctgatctctcccttggcgcctgtcaacggagagatatttcccatcttcaccatcgatttagcaaactgctcaaagaag
26533400
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AGI:
At5g66380.1
Description:
ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1); binding / folic acid transporter. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G25380.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45839.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067)
Range:
from: 26530750
to: 26532921
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g66390.1
Description:
peroxidase 72 (PER72) (P72) (PRXR8). Identical to Peroxidase 72 precursor (PER72) [Arabidopsis Thaliana] (GB:Q9FJZ9;GB:Q43736); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT4G36430.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45838.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016)
Range:
from: 26533142
to: 26534617
Orientation: Reverse
Links:
TAIR
MIPS