Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                   <-----------RAV1(2)              ----------->RAV1(1)             ------>ZmHOX2a(1)                    ------>NtERF2                                   ---   <-----------GT1                               ----------->HVH21                         ------>NtERF2   aaacattaccttctcctccgcagatgattcttccttcaccagttactccctccgacaaaaactctgggcaaaccgatgttcacaattccactccgcgctc  17149900                    ------>NtERF2                <----------DOF2 --->NtERF2     <-----------RAV1(1)     <------NtERF2                              ----------->GT1   tgcctctctggctcacatatgccgctctctctctatttcggcatcgatgttctttgtctccgttttgtatgcattgatcatattgttgtaaaatctcttc  17150000   ------>ZmHOX2a(2)         <-----------GT1                                <-----------GT1   atcgatcttatattatgtctcttactaatttaaactaaactataattgaatggactaaaacgaatataaacaaatgaataaccactaactagaatggttt  17150100                                                                                                 ----                                                                                                <----                                                       <----------ID1                        <-------TEIL                    ------>ZmHOX2a(1)             ---------->DOF2                        <-----------   -------->P   <---------PCF2              ------>ZmHOX2a(1)                            <-----------   agaccaactccattggagggtccttaagagtttctagtactgaatccttacaaaaagaagccaaaattaaatcagaaaaatgaaattaatcaaggtacgc  17150200                                                ----------------->AGL1                                               <-----------------AGL1                                               <-----------------AG                                         <------NtERF2 --->TEIL                               ------------>AtMYB77 -----ALFIN1                           --------->ALFIN1                               <----------DOF2 ----AtSPL3                          <---------O2  <------------CBF      ------------>CBF  ------>ZmHOX2a(1) ----AtSPL8                   <-------TEIL  <-------GAMYB         <----------ID1   <-----------GT1   accttagcttaggtattttgtgatgttttaggtgcgtatacgtggcggtttcccattgggtaaggtaagagacaaaacaattttttttctttcctctgtt  17150300                                                                  <------NtERF2                                                                 ------>NtERF2                                                               ------>NtERF2             *TSS                                              <------NtERF2      <------------CBF                                  <-------TEIL     -------->ATHB1         <-----------GT1       <------ZmHOX2a(2) <---------ALFIN1          -------   tgcgaaatcattgtctctcttctcttgttttctccggatgaattctctctcgatcagcttcatgcggcgtccacatcatcaaattggagaagataaccga  17150400                                    ----------->HVH21                 xxxxxxxxxxxxxxxx>smallRNA(s)         ----------->HVH21  <-----------ARR10                 ------->GAMYB    <-----------HVH21 >GAMYB         ------>NtERF2 <xxxxxxxxxxxxxxxxsmallRNA(s)                           ------->TEIL   agaaaatcgtcccccttccgccgtgatcatcatctcaaccgacggtctcaacatctgtgacttcgaacataatcggcgattttgatgaaccaaatcggag  17150500                        <------ZmHOX2a(1)     ---------->DOF2   agagaagattaataagatagttttgaggaagaaatcacaattagagcttaaagcaagaataaatcacaatcacaagatgagaatttttcggacaacgtag  17150600                                                                                             ------>ZmHOX2a(1)                                                                                 <----------DOF2-----                                                       ------>ZmHOX2a(1)        ------>ZmHOX2a(2)                                        <-----------GT1----------->HVH21        =====================                         ----------->HVH21 ------->GAMYB                        ====================HOX2a_HOX2a                 ---------->DOF2  ----------->GT1      ================================HOX2a_HOX2a   tgataatcagtcaatcggagaaagaaggtgacccgagtgttataaccatcaattgtcctgacaaaacgggtctaggttgtgatctttttcgtatcctcct  17150700        <------NtERF2     ------>NtERF2                                      <-----------RAV1(1) ->ZmHOX2a(1)            ----------->GT1            <----------DOF2                         <-------- ==HOX2a_HOX2a         <------ZmHOX2a(1)    <--------HAHB4                               <-----------RAV1(1)   cttcttcggcctcaacattgtctgaggaggtaacaattccatctcatcattacactttgtgtggttttcaaaaatttcttatttttgatatctgctgtgg  17150800  Previous    Next  AGI:  At5g42720.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G34480.1); similar to unknown [Populus trichocarpa] (GB:ABK95331.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 17147414    to: 17150071    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g42730.1    Description:  expressed protein, similar to Adagio 3 (Arabidopsis thaliana) GI:13487072/FKF1 (Arabidopsis thaliana) GI:6960305 Range:  from: 17150313    to: 17151443    Orientation: Forward Links:  TAIR  MIPS