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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                                                                     ----------------->AGL1
     <----------DOF2                                             ---------->DOF2
-----GT1<-----------GT1<---------ALFIN1                    <----------ID1       <----------ID1
 
tatcatttcttttacggtttctaccaccaccggttttgcatcagaagcaagacgtttctaagaagccaaaatgccaaaatagagagacaaaaacacacac  15184600
                                                                   <-----------GT1
                                                                   ---------->ID1
                                                                  <-----------GT1
                                                              <----------DOF2
                                                            ---------->ID1
                                                        <----------DOF2
            ----------->GT1                          <-----------GT1  <----------DOF2        <------
 
gtattgatcagaaaattgttaatttaatctactggtatattgatatatatatagattttctttttcttttttcctttttccccggaacttatggttcttt  15184700
                                                                                      -------->ATHB1
                                                                       ----------->RAV1(2)
                                                                      ------->TEIL    <--------HAHB4
                                               --------->AtLEC2   --------------->AtSPL3
     ---------->DOF2                       <-----------HVH21      --------------->AtSPL8
----DOF2           <-------TEIL       <<<<<<<<<RAP2.2        <------NtERF2<-----------HVH21
 
ttttcagtcaaagagcttatggttcatatgtagcaaaatttagatatgtcatacaaatagtggaggcaatacgtacctgtccctcggaattattagcata  15184800
              ------>ZmHOX2a(1)           ---------->DOF2      <--------ATHB1
 
actgtgttctccatctcctcccttcatgcttagaacacccatgtttaaagtccctataatacataataatttgacttgattagattatatactaaatcaa  15184900
                                                                         ------>ZmHOX2a(2)
                                                                        <------ZmHOX2a(2)
                      ---------->DOF2                      ----------->GT1
           ----------->GT1                                *TSS         --------->AGP1
 ---------->DOF2  <----------ID1                 <---------AtLEC2      <---------AGP1   <-----------TBP
 
acacaaaagtgatgccgaaaaaaaacaaagaccttgtgtgaattatatttttgcaagatgaagtgtgattattagatctatctagaaccatatatataga  15185000
                                            ----------->HVH21
                                        --------->ALFIN1
                           <---------------AGL15                  --------->ALFIN1
                           =========================================================================
                           --------------->AGL15            --------->ALFIN1
                           ----------->RAV1(1)     <-----------HVH21--------->ALFIN1
 
ccatcataaatctaatcatcattcattttgcaacaaatggcatgtgtgtgactgtgtgagagagtgtgagtgtgggattttccatgattaaaatttattt  15185100
                 <---------------AGL15
                 --------------->AGL15
                ----------------->AG
                ----------------->AGL3
         <-----------GT1              ----------->GT1      ------->TEIL                     --------
     <-----------GT1         ----------->GT1         -------->ATHB1              ----------->RAV1(1)
==================================MADS_MADS   ---------->DOF2           <-----------GT1   ----------
 
cattgttttttctcaccttcccaaatttattaatgttaattaagaaaaaaaaagtattattgtacgtgagagtatttgcgataccaacaaaaaaaaagtc  15185200
--->GT1
>DOF2 <-----------GT1            <-----------GT1 <-----------GT1        ---------->DOF2       <-----
 
aaaattattttgcaatacgtggactgtggaaattaataactattaatgtaattttcttgtcaaaataaccaaaatgaaagaaaacaagtatttattgttt  15185300
                         <---------AtLEC2
                        <-------TEIL
         <---------------AGL15
      <-----------GT1  --------->AtLEC2                 <--------HAHB4
------GT1--------------->AGL15 <-------TEIL  ----------->GT1     <------NtERF2        <----------DOF2
 
ctattcttgtaacttaatattgcaacatgcatgattcatttatgtaatttgttattttatcattaggcgtcgaattcactaaaaaaaaactttcatttat  15185400
                 <-----------GT1
             <----------DOF2
          <-----------GT1           <------ZmHOX2a(1)                   <------ZmHOX2a(1)
 
ggcatattaatatatactttatactgtatttattatttaggactctaaataacaaaaaaaaaacattttgacttaggaccctagataactatttaaatga  15185500
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AGI:  At5g38020.1   
Description:  S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G21950.1); similar to methyl transferase [Arabidopsis lyrata subsp. lyrata] (GB:AAP57211.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:  from: 15182882    to: 15184959    Orientation: Reverse
Links:  TAIR  MIPS