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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                                      <<<<<<<<<ARR2            <----------DOF2
-DOF2      <----------DOF2            <<<<<<<<<ARR1  ----------->GT1                 ---------->DOF2
 
gccatctatcgctactttctatatcacaagtgatacaaacaatcttagctatagtatcgtaattagctttcaaatcatataatatatagaaagagatatt  15152300
                                                 ------>NtERF2
                                        ------->TEIL                  <------ZmHOX2a(1)
                                        <-----------GT1   <---------ALFIN1            <-----------RAV1(1)
          <-----------GT1  <------ZmHOX2a(1) --------->ALFIN1   <-------TEIL      <------ZmHOX2a(1)
 
tgttatatcattgttacttacttgataagaggaattgtggatgtaactgtgcggaccatcaccaccgttcataggaaacgattgaggaaatgttggcatt  15152400
                     --------->O2
                     <---------TGA1a
                     ========================================bZIP_DOF
                     --------->TGA1a
                     <---------O2
                   <---------ALFIN1               <----------DOF2
             ------->GAMYB                       <------NtERF2
             ==================MYC_MYB          ------>NtERF2                       ------->TEIL
<----------DOF2    <------------OsbHLH66      ---------->ID1                ---------->DOF2
===============================bZIP_DOF     <-----------RAV1(1)       ---------->DOF2
 
tctctttgtttttcaacgacccccacgtgtttcatctctccatatgtttgtcgccttaattaaaattaacatgtaaagaaaaagatgaatatgcatatgc  15152500
                                                                 <-----------GT1
                                    ---------->DOF2   ----------->GT1                     ----------
                                ---------->DOF2      --------------->AtSPL8    ----------->GT1     -
                        ----------->GT1              <---------------AtSPL8  ---------->DOF2     <--
 
ctgctaaacaataaactgaaaatgacattgaaaaaaaaagaaagagagagagagggagagtacaatattcacataatcccaaaagtataaatcaagaaaa  15152600
                                                           ---------->DOF2
                                                       <---------------AGL15
                                                       --------------->AGL15
                                                      <-----------------AGL1
                                                      ----------------->AGL1
                                                      ----------------->AGL2
->GT1                                              ----------->HVH21
---------->RAV1(2)                          ----------->TGA1---------->DOF2
---------GT1                                ----------->HVH21
 
taacctgatgcccacaatgctgactactggtgaagctatagcaatagctgacgcatgacccaaaaaggcactcaacattgtttcttagaggcgagagaaa  15152700
                                                                <------ZmHOX2a(1)      ----------->GT1
                                                    ----------->GT1                   ----------->GT1
       <------ZmHOX2a(1)                    <----------ARF1    <----------ID1     --------->ALFIN1
  <----------DOF2            *TSS     <------------CBF  <-----------TBP         --------->ALFIN1 ---
 
acaaactttaggagaattggttattgtttttgggtatgaagaattggaagacaagaagtttatataaggactaagagagggaagcgtgggggataaaaaa  15152800
        ----------->GT1
    ------>NtERF2
   <---------ALFIN1
 ------>NtERF2
<---------PCF2
<---------PCF5                                                                             <-------GAMYB
--------->PCF2                ----------->GT1            <-----------GT1                  <---------
------>ALFIN1        <-----------GT1            <-----------GT1                ----------->GT1
 
ctggggccacctcgtaatttatattaacgtctagtgttaataatctatatataactcattttacaatttctattaacatatagtgttaattttctgttgg  15152900
                                              <-------TEIL                                        --
                                     <---------ALFIN1                                       ------>ZmHOX2a(2)
                              <----------TaMYB80                                           <------ZmHOX2a(2)
--RAV1(1)        <----------DOF2   ------>ZmHOX2a(1)                               <-------TEIL-----
 
agtaattttctcttaagatactttagttcaaggatatcctccacataggttcatacacgaactacattactagtttttagaagaggttcggacgatccga  15153000
       ----------->GT1     <------ZmHOX2a(1)
--------->GT1        ----------->HVH21              <-----------GT1
----->DOF2         <----------DOF2             ----------->GT1
 
aagctaaaaattgtagaattttctttgacaggattagtagttctataagaaggttttacgttttttcatttagcataatcgacatccaatacatatctag  15153100
                                         ---------->DOF2                          <----------DOF2
 --------->AtLEC2<-------TEIL      <---------PCF5       <----------DOF2      ---------->DOF2
 ------>ZmHOX2a(1)       ----------------->AGL1      <-----------GT1   ------>ZmHOX2a(1)
 
cttcctgcaaaaaaattagatgcattaaaccaaaaccgggaccaagaagcacttataaactttttctaaacctcctagacaaaagctttataaaatatgc  15153200
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AGI:  At5g37990.1   
Description:  S-adenosylmethionine-dependent methyltransferase. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G37970.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:  from: 15150967    to: 15152730    Orientation: Reverse
Links:  TAIR  MIPS