Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                               <-------GAMYB                                                            ------>ZmHOX2a(2)                         ----------->GT1              =============HOX2a_HOX2a                      ---------->DOF2                 ------>ZmHOX2a(1)                ----------->HVH21                   ----------->RAV1(2)                   ---------->DOF2   tttaatgcaatagtttagctgacagaaaggtgaatgtctaggcattcgatggtttcctgggatcgttgaagattctcttctgaagaagttggcaaagtat  8430400                                   ----------->GT1              ------>NtERF2   ------->GAMYB                                         <----------DOF2           ------>NtERF2     <---------------AtSPL3                              <-----------GT1  <--   caaatgttgactctgccgctacgataagataacggtacgggaatatttctccctaatagctaacgaaaataacaatcactattttactttttgttgattt  8430500        <-----------GT1        <------ZmHOX2a(1)               ---------->ID1---------->DOF2   <----- ---------GT1                 ----------->GT1         <-----------GT1    <-----------GT1 ----------->GT1   tttctaatttctactatacaaatttgattaccaggaaaatattttatttttattttttatcatttgtttttttttttaccaaagatatatttggttactt  8430600                           ------>ZmHOX2a(2)                         <---------AGP1                    ----------->RAV1(2)                                                           --- -----DOF2 <-----------HVH21   ----------->GT1                                               --------   tattcaactcaattgtcaaggaacctggatctagtgtaaattctcttacatgagacatcacttcattagttctataataatataataaaccgatgaaaag  8430700   <---------------AtSPL3<-----------HVH21 ------>ALFIN1   <------------CBF                                      *TSS -->DOF2    ---------->DOF2  <------NtERF2  ------>ZmHOX2a(1)        <------------CBF         -------   atggggaagtaaggcaaagaattgccttgtcggagaggccagtgtccttagagtaatgctaaaccctaacatattgtcttggggcttgaagctctctaaa  8430800                                                                     ------->TEIL --->DOF2 <----------DOF2------>ZmHOX2a(1)               ----------->RAV1(2)   gcaacttcaccgcttaaacattgcatccttctctccctctacattttatttgttataaaccctggtccatggacttcccagcaaatccatatttcagaaa  8430900                          =====================HOX2a_HOX2a                                      <----                          <------ZmHOX2a(2)                                                <---------ALFIN1            ----------------->AGL1      ------>ZmHOX2a(1)                                ------>ZmHOX2a(1)   tcttaaacgtttatacgataatgggaagatcaccaatggttcctatggctgttcttgtttatgtttctctactgttctctgtttcttattcctccacgtt  8431000                                                                                               <-----                                                                                              -------                   <----------DOF2                                               <-----------RAV1(2)             ------->GAMYB                                                       ====================            <------------AtMYB77                                                <-------TEIL--------- ---TEIL  <-----------GT1                              ------>NtERF2    <---------ALFIN1  <----------   cgtcatcacaaataactgtccctttactatatggcctggaactcttgcaggctctggcacccagccactacccaccacagggttcaggcttgatgtggga  8431100                                                                                 <<<<<<<<<<E2Fd                                                                                 <<<<<<<<<<E2Fb                                                                                 <<<<<<<<<<E2Fa   <-------GAMYB                                                                 <<<<<<<<<<E2Ff   =======================MYC_MYB                                                <<<<<<<<<<E2Fe ----PCF2                                                                        <<<<<<<<<<E2Fc ---->HVH21                                                                     ----------->GT1 =RAV           --------->O2 <-----------HVH21                 <----------DOF2 <------NtERF2 >ALFIN1        --------->TGA1a                           <------NtERF2       ------>NtERF2 -RAV1(1)     <---------ALFIN1 <-----------RAV1(2)<------ZmHOX2a(1)        ------->GAMYB   cagtctgttagaattcccacggctctaggctggtcaggtcgtatttgggctaggactggctgcaactttgatgctaacggcgcgggaaaatgtatgactg  8431200          ---------->DOF2         <------NtERF2                        ------>NtERF2      <------NtERF2                          ----------->HVH21           ----------->HVH21      ------>NtERF2   --------->ALFIN1     ------>NtERF2       <------ZmHOX2a(2)     ------>NtERF2  --------->ALFIN1<------NtERF2     <----------DOF2   <-----------HVH21   gagactgcggcggaaagctggagtgtgctggtaatggcgctgctccgccgacatctcttttcgagatcacactcggtcacggttctgatgacaaagattt  8431300  Previous    Next  AGI:  At5g24620.1    Description:  thaumatin-like protein, putative. similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT4G36010.2); similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT4G36010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48544.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 8430771    to: 8432417    Orientation: Forward Links:  TAIR  MIPS