Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                            <-------TEIL                                                    ---------->DOF2        ------>ZmHOX2a(1)   ---------->DOF2  ----------->GT1                 ------->TEIL          --   taaataaatcctaaaactcaaactaataaaaaaagtatttttttgtgtagtattaaaagatgcagaatccgaaataatgtattttattgtagaagtgatt  5907400                                                                                                -----                                    <----------DOF2                                    <----------DOF2 -------->DOF2                -------->ATHB1 ---------->DOF2                    ----------->HVH21   caaaagaccttatctcgtagtcacttgtagcattattggtttaaggttaaagaaaacatttaaaactctgtatacatcatacatgacatctttacaaatt  5907500                                                                              ----------->RAV1(1)      <-------TEIL                                  ----------->GT1          <----------ID1     <-----------GT1                           <-----------GT1      <-------TEIL   ---------->DOF2 ------>GT1                             <----------DOF2  <-----------GT1 ---------->DOF2     ------>NtERF2   gcaaaatatacatttttaatcagctactctattcttaaattcctttaattaacgaggttatacagttcgatacgtttaagcaacaaaaagttcgatgcca  5907600               ---------->ID1              ------>NtERF2              <-------TEIL        -----------  <--------ATHB1                    <-----------RAV1(1)           ----------->GT1   ---------->DOF2   ctaataatttaatttttgttctcttcttatcttatagattgttgcagcctgcaggcttgcagcataacgagttacataactatatacaaaggcccaatag  5907700                  ---------->DOF2         ----------->ARR10    ---------->DOF2     <-----------RAV1(2)                                                         - ->CBF    ------------>CBF <------ZmHOX2a(1)        <-----------ARR10        *TSS       <----------DOF2   acacctcaaaggcccaataaaaaagcccaggaaaaacgaaaacgaagatatgaagttcttctctaatccgaagcaagaggctcaaactcactttcacttg  5907800                                                                                            <--------                                                                                            ---------                                                                                           ----------                                                                                           <---------                                                                                           ----------                                                                                           <---------                                                                                          <----------                                 <----------DOF2                                          -----------                                ------>ZmHOX2a(2)                                         <----------                               <------ZmHOX2a(2)                                          -----------         <------ZmHOX2a(1) <------NtERF2        <-----------HVH21                         <----------         =============================HOX2a_HOX2a             <----------DOF2             -----------         ==============================HOX2a_HOX2a    <-------GAMYB         ------>NtERF2 ----------- --------->DOF2        <-----------HVH21        <-----------TGA1      <-----------ARR10   <----------   cacaaagataaggaaaccatgtctgtgtcagcgatctttggtaccggaatcgtcaccgttgctgcttctccggttctccgccaatttcaagttccaaaat  5907900         <------ZmHOX2a(1) -------AGL15 ------>AGL15 ----->AGL15 --------AGL1 ------->AGL1 ------AGL15 -------AGL1 ------>AG -------AGL3 ------>AGL2 -------AGL2 ------>AGL3                                 ----------->RAV1(1)                     <------NtERF2 ------>AGL1         --------->ALFIN1      ------>NtERF2                 <------ZmHOX2a(1) -------AG  <------ZmHOX2a(1)   --------->ALFIN1             ------>NtERF2        ------>NtERF2   tgggtaatggaggaggattagggatggtgatagagtgttcgtcgaggccacagaagaaatcgacggctcatcacaggaagacgaggccgaagaagactca  5908000                                                                                                 ----                                                                                             --------                                          ------>ZmHOX2a(1)                                --------->ABI4(2)                                    ------>ZmHOX2a(1)  <------NtERF2                <---------TGA1a                            <-----------GT1  ------>ZmHOX2a(1)------------------>SPL14    --------->ALFIN1               ---------->DOF2     <---------ALFIN1------>NtERF2                 ----------->HVH21 <-   gccttgggacattaagagaaagcctactgtttacgctcctcttcctcctcttccggcggaatggagtccgttcactctcgcttctgacgacggtggtgct  5908100  <-----------RAV1(1)               <--------P  ================================RAV -->NtERF2                    ------>NtERF2 ->ALFIN1  ----------->ARR10<------NtERF2                                            <-----------RAV1(1) --------ALFIN1       <-----------RAV1(2)                    <-------GAMYB        <----------DOF2   gccactgctgcgggagatttggtttcaggcgctgcctagttggtatgagttatctgctgatttggttgtaatctagtttgagaacttttgttgttgttta  5908200                        <-----------RAV1(1)                      <-------GAMYB                     <-----------RAV1(1)                                       ---------->DOF2    ---   ctgtgttttcagttttctgatgtttgttgttgggtttgtttgtgtttgattggtgaatgaatggaccaaatttgcgatttataaagcttcaacctttctc  5908300  Previous    Next  AGI:  At5g17870.1    Description:  PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6). Identical to Plastid-specific 50S ribosomal protein 6, chloroplast precursor (PSRP6) [Arabidopsis Thaliana] (GB:Q9FKP0); similar to unknown [Populus trichocarpa] (GB:ABK95296.1); contains domain PD069352 (PD069352) Range:  from: 5907777    to: 5908337    Orientation: Forward Links:  TAIR  MIPS