Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                    <-----------GT1
             ---------->ID1              <--------P                 ---------->DOF2
 
agattgcacgctgttttgcgtttttactagtctaaatggttcgggttgaatttgataatcggaaactaagaaaaagtaatcgttttaaaaacgggactat  1241200
                                                                     ------>ZmHOX2a(1)
                                                              <-----------GT1                      -
            ------->GAMYB                                    <-----------GT1                    <---
---------->DOF2                      <------ZmHOX2a(1)<------------CBF                         <----
 
tacaaaagatgccaacgaacaatatgggcctctaaacttaggatatggcccaattaatattgatttaccctcctaaactacagactagtctaattttttt  1241300
---------->GT1
--------GT1           ----------->TBP                                 <----------ID1
-------GT1       <-----------GT1    <---------ALFIN1      <-----------GT1       ----------->GT1
 
aaccgttaatagtgttttatttactacaaaaacaacgttgcaccccaaaaacaaaaaaaattaactgcacaaaacgacaagaaacgtaaaatccaaattc  1241400
                                                                                             <------
                                                                                   <----------DOF2
                  ----------->GT1                                               ---------->ID1
            ---------->DOF2  <------ZmHOX2a(2)                       <----------DOF2      ------>ZmHOX2a(1)
 
gaaatgtagtcgttttaaagtctgtgaaatagatcaaattttgcttgcgttctaaggtactcatttcttgggcttttcattttgttctttctcctccgtc  1241500
                                                                                                 ---
                                          <----------DOF2                                       <---
                                 --------------->AtSPL3                                        -----
                                 <---------------AtSPL3                            <----------DOF2--
                                 <---------------AtSPL8                      --------->ALFIN1<------NtERF2
                   ----------->GT1   <-------TEIL                         --------->ALFIN1  --------
-----HVH21      ---------->DOF2  --------------->AtSPL8              ---------->DOF2        ------>NtERF2
 
aaatcgagagagagatttggaaaggtgatacaagaataagtacgtcttttcgttaatggctcgcgactccaagaaagctggtggagctttaccggcgccg  1241600
                       <------NtERF2
-------->HVH21      ------>NtERF2
---NtERF2           <------NtERF2
->NtERF2           ------>NtERF2
---->NtERF2     <-----------RAV1(1)     ------>ZmHOX2a(1)                             --------------
->ABI4(2)    <-----------RAV1(1)      ----------->RAV1(2)                             <-------------
 
gcgactgctatgggtaatgctgcggcggagacatcgctccctcctggcttccgatttcatccatccgatgaagaactcattagctattacttgaagaaga  1241700
 <-----------RAV1(2)
<-------TEIL
->AGL15                                                                                            <
--AGL15                                                                               ------>ZmHOX2a(1)
 
aggttcagggaaaacccatgcgatacgatgagattggagaagtagatatttgcaagctcgagccctgggacttagcagttataatcttcctctgtttctt  1241800
                   <--------P
                 ----------->GT1
          <-------GAMYB                                                  <-----------GT1
----------DOF2<-----------RAV1(1)                                  ----------->GT1
 
ggctttagatttccgttatgtggtagatttcgtgttcttcaagtttgtgtaagtgataactcttcgagaagggttttaactcaatggcttctggatttct  1241900
                                                          <----------DOF2
      <----------DOF2                                 <-----------GT1
    --------->ABI4(2)  ----------->GT1       --------->AtLEC2---------->DOF2      <--------P
 
tggccggtgcttttgctattcttaggttgtataactgtgaatcattccatccaaaattaacctttaaagcatttctcacgaattggttgcttgtaattta  1242000
                                                                                    <----------ID1
                              ----------->HVH21                              <----------ID1
                            <----------DOF2         <----------DOF2        ---------->DOF2
 
agaaatgtagtttgagttagtgttatatagtctttgacacttagtggttttcttgctttgtttcagtgcattcgaagttaaagacaagggacaaagaatg  1242100
<- Previous    Next ->

AGI:  At5g04400.1   
Description:  ANAC077 (Arabidopsis NAC domain containing protein 77); DNA binding. similar to ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10490.2); similar to unknown [Populus trichocarpa] (GB:ABK93555.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441)
Range:  from: 1241556    to: 1243359    Orientation: Forward
Links:  TAIR  MIPS