Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                   <-----------GT1                                     <-----------GT1           ------       ----------->GT1      >>>>>>>>>RAP2.2             ---------->DOF2          <---------ALFIN1   gcctagaattggttaaattttactcatcaatctaaaaactaaattgaacaagaaaaactaaagacactattttacatgtgatcacaccccgaagaaatag  1238700                                                                            <-----------RAV1(1)     <     ----------->GT1                                            --------------->AtSPL8         <----- ----->GT1                                                      <---------------AtSPL8----------->GT1   ttatacagagtaaaaaaacgggataatgagtggaacaaacaaatatttgtatagaaattgtctaaaattgtacattttttgttggaaattgttacacaca  1238800                                       <---------------AGL15                                       --------------->AGL15                                      <-----------------AGL1          <----------DOF2             ----------------->AG ----------DOF2                       ----------------->AGL1 ----ALFIN1              ----------->GT1   --------->ALFIN1                                         -   ctctttctctctctttatctgattgtaatgtgattagtttgccaagttgggcaaatggtagaagagagacaataacagaagtactaaaatttaagaggct  1238900                                                                    <----------DOF2                                                               ------->TEIL                                                           <---------------AtSPL3                                                           --------------->AtSPL8    <------ZmHOX2a(1)                                      <---------------AtSPL8   <----------ID1         <---------ALFIN1               --------->ALFIN1            ------>ZmHOX2a(1) --------->DOF2       <-----------GT1                  --------->ALFIN1      ------>ZmHOX2a(1)   acaaaaggacaagtccaaacatattcacacactctctcatatatttttgttctatatgtgtggtgtacctctttgactcctctcttcctaaatcactcac  1239000                                                                             ================HOX2a_HOX2a                                                                             ------>ZmHOX2a(2)                                                                            =================HOX2a_HOX2a                                                  ------>ZmHOX2a(1)         <------ZmHOX2a(2)                                                  =================================HOX2a_HOX2a                                                  ==================================HOX2a_HOX2a                                        <---------ALFIN1                   <---------AGP1                 <---------ALFIN1     <---------ALFIN1                     <-----------ARR10      ------->TEIL <---------ALFIN1 ----------->RAV1(1)           ----------->TBP     ------>ZmHOX2a(1)   tatttatgtatctatctctccacacatctctctccatcccacacacatcttcctcttaacacattactatatatgcggatctctcatccttaacttattc  1239100                                 <------ZmHOX2a(2)                             ------>ZmHOX2a(2)                         =============================HOX2a_HOX2a                         ------>ZmHOX2a(1)                         ================HOX2a_HOX2a                       ----------->RAV1(2)                 ========================HOX2a_HOX2a                 ------>ZmHOX2a(1)------>ZmHOX2a(2)                 ===================HOX2a_HOX2a------>ZmHOX2a(2)                 =======================HOX2a_HOX2a                 =====================================HOX2a_HOX2a      ----------->RAV1(1)===============HOX2a_HOX2a ------->TEIL                      ---------->DOF2 *TSS =============================RAV   <----------DOF2                           ----------->RAV1(1)   ataatcaacaacacaaatcctcttctcctgatccgatcttcatctttgatcttgaatctcttgctaatggaagcgttcgaagaggccacaaaggagcaat  1239200                   ------>NtERF2        ---------->DOF2      ------>ZmHOX2a(1)     <---------------AGL15     --------------->AGL15    ------>ZmHOX2a(2)    ----------------->AGL1                          <----------DOF2             -------->P    ----------------->AGL2----------->HVH21   ------>ZmHOX2a(1)       ------>ZmHOX2a(1)   ctttgatccttaaagggaagcggacgaagcgacaacgtccacaatctcctattcctttctctatctcccctcctatagtttctaccccggaaaacaacat  1239300                                                          ------->GAMYB                                         <------ZmHOX2a(1)----------->RAV1(1)                            <------ZmHOX2a(1)             --------------->AGL15                ------>ZmHOX2a(2)   <----------DOF2      ----------------->AGL3                ================================HOX2a_HOX2a    ---------->DOF2                ===================HOX2a_HOX2a          -------->P <------ZmHOX2a(1)   ggaagaagaatacactgatcttgattccaaggacaatgctttaggaaatgatgagggcaaccacaaaaaggatggtgtgatcacatcttcatcttcatca  1239400                                                <------ZmHOX2a(1)                                    <------NtERF2    <------ZmHOX2a(2)         ------>ZmHOX2a(1)         ----------->RAV1(1)                                     <------ZmHOX2a(1)   gcctcttggtcctcccaaaacaatcacacattgaaggcagcagaagacgaggaagatcaagacatagccaattgtttgatactccttgcccaaggacact  1239500                           ---------->DOF2                      <------ZmHOX2a(1)                 <---------ALFIN1                            <-----------RAV1(2)     <---------ALFIN1 -------->P----------->RAV1(1)    <-----------GT1                        -------   ctcttccccacaacaatcaccacttaccaaacagcaacaacaacaacacgtatagatttaccagcaggaggtttctagaaacttcttcttctaacagtgg  1239600  Previous    Next  AGI:  At5g04390.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G10470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69085.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 1239101    to: 1240518    Orientation: Forward Links:  TAIR  MIPS