Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                                                                     <---------O2
                                                                     --------->O2
                                                                     <---------TGA1a
                                                      ----------->RAV1(1)               <-----------RAV1(1)
                                                 ---------->DOF2     --------->TGA1a <-----------RAV1(1)
                  <------NtERF2 ----------->GT1  ==============================bZIP_DOF --------->ALFIN1
 
tctaatcgaatcgatttgggcaccgtagcatcgatgagtgaatcgatatggtcaaagccacagaatttagccatgtgggtttgttcgtctggtgttgcag  15930900
                                                                                       <-------GAMYB
                                                                                     --------->ALFIN1
                                                                                   --------->ALFIN1
                                                                                 --------->TGA1a
                                                                                 <---------TGA1a
                                                                                 ===================
                                                                         ==================bZIP_DOF
                                                                    ------>NtERF2==============MYC_MYB
                                                                 ------>NtERF2   ===================
                                                             <-----------RAV1(1) <---------O2
             ---------->DOF2          ----------->HVH21    ----------->RAV1(2)  <------NtERF2   <---
 ----------->TGA1                ------->GAMYB            <-----------RAV1(1)  ------>NtERF2   -----
 ----------->HVH21            <-----------GT1          <-----------HVH21 ---------->DOF2 -----------
 
agttgtgacgacgagggaaagtatcgctgggtttaacagcatcgacggagatggaacgcgtctgctggtgcctcccgaaagccgccgtgtggttgacaga  15931000
    --------->ALFIN1
  --------->ALFIN1
=======================bZIP_DOF
=======================bZIP_DOF                             --------->ALFIN1
---ZmHOX2a(2)                                       <------ZmHOX2a(1)     <----------DOF2
---->AGP1          ---------->DOF2              --------->ALFIN1 --------->ALFIN1  <------NtERF2
>HVH21      ---------->DOF2                <------NtERF2   <-----------HVH21     --------->ALFIN1
 
tcgaggggtggagatgaaaggggaaagggaagagacatacctcgccggagcgtgaggaacaaggtgaggtgtttcagcgttacggtgtcgttttgtgtcg  15931100
                   ------>ZmHOX2a(1)
          <-----------GT1                          <----------ID1
         ----------->HVH21                         ----------->GT1
 
ttaacgagacgtttgacgattcctctgtaagcaagtctccttgcgcgctccattgggaaaaaaggttgcagtcagaaaacgaagagagtaagagagatgt  15931200
               <----------DOF2         ---------->DOF2
          ------->TEIL     ---------->ID1     <------ZmHOX2a(1)                           <---------
  ---------->DOF2         <-----------GT1   --------->ALFIN1                        ----------->GT1
 
tttgagaaagatggatgtcttttttagtttttcgccatgaatgaaaggaggaggtagaagctagctacaaggagggaatctgagagagagtatatacaat  15931300
                                    --------->O2
                                    --------->TGA1a
                                    <---------TGA1a
                                    <---------O2
           <-------GAMYB          <-----------GT1
           ===================================MYC_MYB
--GT1 ----------->HVH21           *TSS                     ----------->TBP                       ---
 
atacactcacggaccgttgaatataaaatgtgtatattcacgtcccaagaaatagttagtttataaatacagagaaatttttgggaaataaataaaaatc  15931400
                                  ---------->DOF2
                                  ==========================bZIP_DOF
                             ----------->GT1      --------->TGA1a
                           =================================MYC_MYB
                           <--------P             --------->O2
                          ==================================MYC_MYB
          --------->ALFIN1<-------GAMYB           <---------O2
--->ZmHOX2a(1)          --------->ALFIN1          <---------TGA1a                          <--------HAHB4
 
ctcaaatttcgtggtgtaggctcggatgtggttggtgaaaagttgcagattccacgtgtatcgcatctaaatcagtagtgcaatattgtgctaatcattt  15931500
                      ------>NtERF2
                     ----------->HVH21                                          <-----------GT1
                  ------>ZmHOX2a(2)                                           <-----------GT1
                <---------AGP1                                        <-----------GT1     <---------
 
tatttttatgattaaattggatctccgacatctcttaattatttgtttattagtagcagtttctccaaactatttacattttttcacaacaatatacaat  15931600
      <---------------AtSPL8        <------ZmHOX2a(1)
--GT1 --------------->AtSPL8 ---------->DOF2      <----------DOF2           ------>ZmHOX2a(1)  -----
 
attttttattgagtactaactattgtgattttaaaagtaggattatttagtgtctttagttcgcaaatttcttattttcctacaaaaactgtagttcccc  15931700
                                                                              ----------->GT1
          ----------->GT1                                                <---------------AtSPL3
         <-------TEIL ----------->GT1                                    <---------------AtSPL8
   <----------ID1   ---------->DOF2                               ----------->RAV1(1)
---------->AGL15 ----------->GT1                         <-----------GT1---------->DOF2           --
 
tctaatgggacatacgtaaattgtaaagtttaatcaatgttaagtttttttggttctgatttacatatccaacaaaaaagtacgaaaaaatagaatttat  15931800
<- Previous    Next ->

AGI:  At4g33010.1   
Description:  ATGLDP1 (ARABIDOPSIS THALIANA GLYCINE DECARBOXYLASE P-PROTEIN 1); glycine dehydrogenase (decarboxylating). Identical to Putative glycine dehydrogenase [decarboxylating] 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q94B78;GB:O82642;GB:Q8GTY1;GB:Q8VZF0); similar to ATGLDP2 (ARABIDOPSIS THALIANA GLYCINE DECARBOXYLASE P-PROTEIN 2), glycine dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT2G26080.1); similar to Glycine dehydrogenase [decarboxylating], mitochondrial precursor (Glycine decarboxylase) (Glycine cleavage system P-protein) (GB:P26969); similar to Glycine dehydrogenase [decarboxylating], mitochondrial precursor (G
Range:  from: 15926673    to: 15931335    Orientation: Reverse
Links:  TAIR  MIPS